prot_Ecto-sp13_S_contig1290.2388.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1290.2388.1
Unique Nameprot_Ecto-sp13_S_contig1290.2388.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1045
Homology
BLAST of mRNA_Ecto-sp13_S_contig1290.2388.1 vs. uniprot
Match: A0A6H5KBR4_9PHAE (Protein CASP (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR4_9PHAE)

HSP 1 Score: 1130 bits (2922), Expect = 0.000e+0
Identity = 853/1079 (79.05%), Postives = 879/1079 (81.46%), Query Frame = 0
Query:    1 MSAQQHRERQRQRVDTLEDCLRLRDNEIAKLEKQVASLTERNTELTERVLQLESVGGESETQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GSFCCEHAAAAFKLASSXXXXEGVSASTARGKGGGAYDASDTGGVTTEDQAHSSSSESDSDDLSPMSTLDKRSNHPATPPLSPSNATGGG-AMAMASVVAGGIAGSFAVTDELLEFSLSACGTTAGAATTGTGGVWTGGDVMMDGEXXXXXXXXXXXARSFSTVAAAVAAIDDAGPAVGVGEXXXXXXXXXXXXX-----RLAETLSAMEFSVPDGVMAADSAQAQPPTGSGVSSASGLLAFEAA-GGXXXXXXXXAAEGLVPFGDHPAAA------DGMGCCSEEDELTMAALDPMEIDALLACAGGDGEDCVKDPFDTTNGSSRGIVIDGCGGSSNGGGGASPCELEAGNNTGVQANAAAEXXXXXXXXXXXXXXXXXXXHLXXXXXXXQRDVVVAPGRLHAPPSRNSGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---GVMGALCLAGVVLNSGTTTAPGGGTGTGRALVPAHKNSPPSXXXXXXXXXXXXXXXXXXXXEDGEYANATEPQPWVFHPVEAEPWRWRATAARERRGPWVWERALNLFGNAGFGNDHPRGDNDAGCHEDVVGVYAKRTGRPSYTPIAPPPAISNPIDEDVQQQQQQQ--------------LSGKELDLFYNLDNNADTAGDGGIAGYASRSPXXXXXXXXXXXXXHGPTATAAAAGGSRGVG---------AGAGLPSDRTSFVFCPEAHGMMSGGMIERASKATYDYHHPGARPCPAGRGGEGGVPQDRDSEFHGGAGEVKVNVINPRRERLRLLAADT-QVQPHAEDPHAAVDAAEYLALVSSSNANMDVDGGGEIYFGSAGDEGGAAFGEGVDDSNRPRRRGPAPMHHRGPSGAASPQRGFHAGGGDYLQSPSSDSEFLTMLVPSSALDWGPSTLAVRASLNGTGDXXXXXXXXXXXXXXXXSWVEIDCQILSARLVQ 1038
            MSAQQHRERQRQRVDTLEDCLRLRDNEIAKLEKQVASLTERN EL ERVLQLESVGGESET XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GSFCCEHAAAAFKLA  XXXX          KGGGAYDASD GGVTTEDQAHSSSSESDSDDLSPMSTLDK SNHPATPPLSPSNATGGG AMAMASV AGGIAGS AVTDELLEFSLSACG TAG ATTGTGGVWTGGDVMMDGE XXXXXXX   ARSFSTVAAAVAA+DDAGPA GVGE    XXX           RLAETLSAMEFSVPDGVMAAD+AQAQP  G G  SASGLL+FEAA GG        AAEGLVPFGDHPAA       DGMGCCSEEDELTMAALDPMEIDALLAC GGDGED V+DPFDTT G+                   SPCELEAGNNTG Q N    XXXXXXXXXXXX  XXXXX  XXXXXXX                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     GV+GALCL GV LNSGTT  PGGGTGTGR LVPAHKNSPPS     XXXXXXXXXXXXXXXEDGEYANATEPQPWVFHPVEAEPWRWRATAARERRGPWVWERALNLF NAGFG+DHPRG NDAGCHE  VGVYAKRT RPSYTPIAPPPAIS+P+DED+QQ                   LSGKELDLFYN ++N DT+GDGG+AGYA+ SP XXXXXXXXXXXX                          AGAGLPS+RTS+VFCPEA+GMMSGGMIERASKATYDYHHPGARPCPAGRGG+GGVP+D DSEFHGGAGEVKVNVI+ R+ERLRLLAAD+ QVQPHAEDPHAAVDAAEYLALVSSS+ANMDVDGGGEIYFGSAGDEGGAAFGEG +DSNRPRRRGPAPMHHRGPSGA  PQRGFH G GDYLQSPSSDSEFLTMLVPSS+LDWGPSTLAVRASLNGT D   XXXXXXXXXXXX SWVEIDCQILSARLVQ
Sbjct:  240 MSAQQHRERQRQRVDTLEDCLRLRDNEIAKLEKQVASLTERNKELAERVLQLESVGGESETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFCCEHAAAAFKLAXXXXXXXXXXXXXXXXKGGGAYDASDAGGVTTEDQAHSSSSESDSDDLSPMSTLDKGSNHPATPPLSPSNATGGGGAMAMASVAAGGIAGSLAVTDELLEFSLSACGATAGTATTGTGGVWTGGDVMMDGEEXXXXXXXPL-ARSFSTVAAAVAAVDDAGPAAGVGEAAGAXXXAGVGAAALPPPRLAETLSAMEFSVPDGVMAADAAQAQPSAGGGGLSASGLLSFEAAAGGSRGGSGADAAEGLVPFGDHPAAXXXXXXXDGMGCCSEEDELTMAALDPMEIDALLACVGGDGEDGVRDPFDTTTGNXXXXXXX------------SPCELEAGNNTGAQENXXXXXXXXXXXXXXXXGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVAAGVIGALCLVGVALNSGTTP-PGGGTGTGRELVPAHKNSPPSVITSRXXXXXXXXXXXXXXXEDGEYANATEPQPWVFHPVEAEPWRWRATAARERRGPWVWERALNLFENAGFGDDHPRGGNDAGCHEAAVGVYAKRTARPSYTPIAPPPAISHPLDEDLQQXXXXXXXXXXXXXXXXXXXLSGKELDLFYNRNDNVDTSGDGGVAGYANGSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYVAGAGLPSERTSYVFCPEAYGMMSGGMIERASKATYDYHHPGARPCPAGRGGDGGVPEDGDSEFHGGAGEVKVNVIDARQERLRLLAADSPQVQPHAEDPHAAVDAAEYLALVSSSDANMDVDGGGEIYFGSAGDEGGAAFGEGGNDSNRPRRRGPAPMHHRGPSGAT-PQRGFHGGSGDYLQSPSSDSEFLTMLVPSSSLDWGPSTLAVRASLNGTSDSDGXXXXXXXXXXXX-SWVEIDCQILSARLVQ 1302          
BLAST of mRNA_Ecto-sp13_S_contig1290.2388.1 vs. uniprot
Match: D7FWU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU5_ECTSI)

HSP 1 Score: 600 bits (1547), Expect = 1.140e-200
Identity = 515/703 (73.26%), Postives = 522/703 (74.25%), Query Frame = 0
Query:    1 MSAQQHRERQRQRVDTLEDCLRLRDNEIAKLEKQVASLTERNTELTERVLQLESVGGESETQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFCCEHAAAAFKLASSXXXXEGVSASTARGKGGGAYDASDTGGVTTEDQAHSSSSESDSDDLSPMSTLDKRSNHPATPPLSPSNATGGGAMAMASVVAGGIAGSFAVTDELLEFSLSACGTTAGAATTGTGGVWTGGDVMMDGEXXXXXXXXXXXARSFSTVAAAVAAIDDAGPAVGVGEXXXXXXXXXXXXXRLAETLSAMEFSVPDGVMAADSAQAQPPTGSGVSSASGLLAFEAAGGXXXXXXXXA--AEGLVPFGDHPAAA-DGMGCCSEEDELTMAALDPMEIDALLACAGGDGEDCVKDPFDTTNGSSRGIVIDGCGGSSNGGGGASPCELEAGNNTGVQANAAAEXXXXXXXXXXXXXXXXXXXH----LXXXXXXXQRDVVVAPGRLHAPPSRNSGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVMGALCLAGVVLNSGTTTAPGGGTGTGRALVPAHKNSPPSXXXXXXXXXXXXXXXXXXXXEDGEYANATEPQPWVFHPVEAEPWRWRATAARERRGPWVWERALNLFGNAGFGNDHPRGDNDAGCHEDVVGVYAK 696
            MSAQQHRERQRQRVDTLEDCLRLRDNEIA+LEKQ                                                                                LASS    EGVSAST RGKGGGAYDASD GGVTTEDQAHSSSSESDSDDLSPMSTLDKRSNHPATPPLSPS AT GGAMAMASV AGGIAGS AVTDELLEFSLSACGT+AG  TT   GVWTGGDVMM GE  XXXXXXXXX                         XXXXXXXXXXXXXRLAE+LS MEFSVPDGVMAAD+AQAQPP G G  SASGLLAFEAAG XXXXXXXX   AEGLVPFG HPAAA DGMGCCSEEDELTMAALDPMEIDALLACAGGDGED V+DPFDTT+                    ASPCELEAGNNTGVQANA   XXXXXXXXXXXXXXXXXX H    L         DV VAPGRLHAPPSRNSGT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVMGALCLAGVVLNSGTTT P GGTGTGRALVPAH+NSP  XXXXXXXXXXXXXXXXXXXXEDGEYANATE QPWVFHPVEAEPWRWRATAARERRGPWVWERALNLFGNAGFGNDHPRG  DAGCHEDVVGVYAK
Sbjct:    1 MSAQQHRERQRQRVDTLEDCLRLRDNEIARLEKQ--------------------------------------------------------------------------------LASSSSSAEGVSASTTRGKGGGAYDASDAGGVTTEDQAHSSSSESDSDDLSPMSTLDKRSNHPATPPLSPSTATSGGAMAMASVAAGGIAGSLAVTDELLEFSLSACGTSAGTVTTA--GVWTGGDVMMAGEGEXXXXXXXXXXXXXXXXX--------------XXXXXXXXXXXXXXXXRLAESLSTMEFSVPDGVMAADAAQAQPPAGGGGLSASGLLAFEAAGXXXXXXXXXXXXAEGLVPFGHHPAAAADGMGCCSEEDELTMAALDPMEIDALLACAGGDGEDGVRDPFDTTDSXXXXXXXXXXXX-------ASPCELEAGNNTGVQANAXXXXXXXXXXXXXXXXXXXXXGHGNDHLQQQHLQQHHDVAVAPGRLHAPPSRNSGT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVMGALCLAGVVLNSGTTTTPDGGTGTGRALVPAHRNSPXXXXXXXXXXXXXXXXXXXXXXEDGEYANATEAQPWVFHPVEAEPWRWRATAARERRGPWVWERALNLFGNAGFGNDHPRGGIDAGCHEDVVGVYAK 599          
BLAST of mRNA_Ecto-sp13_S_contig1290.2388.1 vs. uniprot
Match: D7FWU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU4_ECTSI)

HSP 1 Score: 388 bits (997), Expect = 1.650e-124
Identity = 209/237 (88.19%), Postives = 215/237 (90.72%), Query Frame = 0
Query:  810 MMSGGMIERASKATYDYHHPGARPCPAGRGGEGGVPQDRDSEFHGGAGEVKVNVINPRRERLRLLAADT-QVQPHAEDPHAAVDAAEYLALVSSSNANMDVDGGGEIYFGSAGDEGGAAFGEGVDDSNRPRRRGPAPMHHRGPSGAASPQRGFHAGGGDYLQSPSSDSEFLTMLVPSSALDWGPSTLAVRASLNGTGDXXXXXXXXXXXXXXXXS-WVEIDCQILSARLVQDVSFLD 1044
            MMSGGMIERASKATYDYHHPGARPCPAGRGG+GGVP+D DSEFHGGAGEVKVNVI+PR+ERLRLLAAD  QVQPHAEDPHAAVDAAE LALVSSS+ANMD+DGGG IYFGS  DEGGAAFG G DDSNRPRRRGPAPMHHRGPSGAASPQRGFHAGGGDYLQSPSSDSEFLTMLVPSSALDWGPSTLAVRASLNGT D          XXXXXXS WVEIDCQILSARLVQDVSF D
Sbjct:    1 MMSGGMIERASKATYDYHHPGARPCPAGRGGDGGVPEDGDSEFHGGAGEVKVNVIDPRQERLRLLAADAPQVQPHAEDPHAAVDAAEALALVSSSDANMDMDGGGNIYFGSGRDEGGAAFGAGGDDSNRPRRRGPAPMHHRGPSGAASPQRGFHAGGGDYLQSPSSDSEFLTMLVPSSALDWGPSTLAVRASLNGTSDGDGGRGATAGXXXXXXSSWVEIDCQILSARLVQDVSFSD 237          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1290.2388.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KBR4_9PHAE0.000e+079.05Protein CASP (Fragment) n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWU5_ECTSI1.140e-20073.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWU4_ECTSI1.650e-12488.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 21..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1290contigEcto-sp13_S_contig1290:2874..13477 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1290.2388.1mRNA_Ecto-sp13_S_contig1290.2388.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1290 2847..13477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1290.2388.1 ID=prot_Ecto-sp13_S_contig1290.2388.1|Name=mRNA_Ecto-sp13_S_contig1290.2388.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1045bp
MSAQQHRERQRQRVDTLEDCLRLRDNEIAKLEKQVASLTERNTELTERVL
QLESVGGESETQQQQQRQQQTNADSSPAHAAAPAAAAVAAVAAAASTDTA
TGSFCCEHAAAAFKLASSSSAAEGVSASTARGKGGGAYDASDTGGVTTED
QAHSSSSESDSDDLSPMSTLDKRSNHPATPPLSPSNATGGGAMAMASVVA
GGIAGSFAVTDELLEFSLSACGTTAGAATTGTGGVWTGGDVMMDGEEEEE
EAASPPLARSFSTVAAAVAAIDDAGPAVGVGEAAAGAGAAAPPPPRLAET
LSAMEFSVPDGVMAADSAQAQPPTGSGVSSASGLLAFEAAGGGGGGSGAG
AAEGLVPFGDHPAAADGMGCCSEEDELTMAALDPMEIDALLACAGGDGED
CVKDPFDTTNGSSRGIVIDGCGGSSNGGGGASPCELEAGNNTGVQANAAA
EAATASSSSSSRNKRGHGNDHLQHQQHQQQRDVVVAPGRLHAPPSRNSGT
PPTSSQASGSYPPSSSVAAAAAASVASFRGGGSGGLPSGDNGRGGGGGAG
GGGVASTVAAGVMGALCLAGVVLNSGTTTAPGGGTGTGRALVPAHKNSPP
SVITSRGGGARVLSAAGDDDDEDGEYANATEPQPWVFHPVEAEPWRWRAT
AARERRGPWVWERALNLFGNAGFGNDHPRGDNDAGCHEDVVGVYAKRTGR
PSYTPIAPPPAISNPIDEDVQQQQQQQLSGKELDLFYNLDNNADTAGDGG
IAGYASRSPGGGGGGQRGQGGRHGPTATAAAAGGSRGVGAGAGLPSDRTS
FVFCPEAHGMMSGGMIERASKATYDYHHPGARPCPAGRGGEGGVPQDRDS
EFHGGAGEVKVNVINPRRERLRLLAADTQVQPHAEDPHAAVDAAEYLALV
SSSNANMDVDGGGEIYFGSAGDEGGAAFGEGVDDSNRPRRRGPAPMHHRG
PSGAASPQRGFHAGGGDYLQSPSSDSEFLTMLVPSSALDWGPSTLAVRAS
LNGTGDGDGGGRATGGSSSSSSSWVEIDCQILSARLVQDVSFLD*
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