mRNA_Ecto-sp13_S_contig12795.2310.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig12795.2310.1
Unique Name	mRNA_Ecto-sp13_S_contig12795.2310.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig12795.2310.1 vs. uniprot
Match: A0A6H5J8H1_9PHAE (Structure-specific endonuclease subunit SLX4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H1_9PHAE)

HSP 1 Score: 1033 bits (2672), Expect = 0.000e+0
Identity = 807/1140 (70.79%), Postives = 825/1140 (72.37%), Query Frame = 1

Query:    1 RLAAHRTFGARLSAGAGGVPSESGGGDGGGAPKTAEEVVDIIFADEHGVAAAA-GIGGDAGTPLPVSTSLLSEGGRSQQRGAGLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTPAPXXXXXXXXXXXXXXXXXXXXXXXFVAGARGTPLSGDKPRYDDDKGCWGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRARRGRTLWAIAQGAGELSQSHFVTGVFADFRANSTGGVRGGAGGKPHAAKPRRRAAVTAAAYGDARLYNRRVGSSAAASPSALSSTLCSDQGDIDAATRSAVAADTDEGMGGGLPGKSGREQSASQLNPSDENGXXXXXX--AIDDAIQLLSQTLSQASVS-LGXXXXXXXXXXXXXXXXXXXXXXXXVERFAARHIARAPVSSLSGLFPNWKENVVFVFRQGAAELHEALQGIVAALSEXXXXXXXXXXXXXXXRGGEGAGTEGCPSGVRTRSRKAEALMFFEGIILEALEARGPACSRQSASLGE-----DGSRSPGFEVGSPQTRRRGSEGVGSGRNGGGAATPGSDSPPRDGASSVQDKGFAFEEQEESRRTRDDVGGSEGGEGQAXXXXESGDHLSVADEATGLEETHAATAEN-GNDAELAAGGADDGDAGTRSGGHPHHGDSSVEAIVLSGDSTASAVVTFDLTSSEASKRCSTAGDTATAAXXXXGGVA----VAGLAELPVGADGSSRNSGRGVTARVRNGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHRGVTASGRNGXXXXXXXXXXXXXXXXXXXXXXXXGANGSGSADERGEVNGDGDDVVDEYALEDEYGFDDHDYCAWGDENDLSFVPSPDIDGVADERQPPPXXXXXSPPLSPTQRXXDIDXXAAP--AADKASHDSTSAMGAELLDLTQVAPLPSPSPRRCRESPDAAATTSPIGRGRSQHRGLGSPTASRRGHXXXXXXXXXXXXXXXXXXXXXXXNGEDAEPREVMPSFGQMTLQELAGMMAVYGLKKKSKREMTERLEHIWNTLHPAAANGGMSAAGDGTXXXXXXXXXXXXXXK-RDAPSRDSSDGPSSCLSASPEGRRRSRAAAEARPTFS 3369
            +LAAHRT GARLSAGAGGVPSES G    GAPKTAEEVVDIIFADEHG AAAA GIG  A TPL VSTS LSE GR+QQRGA L S                                                     +GTPAP          XXXXXXXXXXXXXFVAGARGTP SGD PRYD DKGCWGDD XXXXXXXXX                           SRARRGRTLWAIAQGA ELSQS FVTGVFAD RANSTGGV GGAGGKPHAAKP RRAAVTAAAYGDARLYNRRV SSAAASPSALSSTLCSDQGD            TDEGMGGG PGKS REQSASQLNPSDENG   X    A+DD IQLLSQTLSQASVS   XXXXXXXXXXXXXXXXXXXXXXXX ERFAARHIARAPVSSLSGLFPNWKENV FVFRQGAAEL EALQGIV ALSE                                  ++AEAL+FFEG+ILEALEARGPACSRQ A LGE     DGS SPGFEVGSPQT RRGSEGVG GRNGGGA TPGSDSPPR GA+SVQD GFA E  EE    R D GGSE GEGQA    ESGDHLSVADEATGLEETHA TAEN G+DAE AA G DDGDAGT+S GHPHHGDSSVEAIVLSGDSTASAVVTFDLTSSE+SKRCS+AGD     XXXX         AGLAE PVGADG  RNSGRGVTAR RNGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      KSHRGVTAS RN    XXXXXX XXXXXXXXXXXXXXGANG  S DERGE +GD DDVVDEYALEDEYGFDDHDYCAWGDENDLSFVPSPDIDGVADERQP  XXXXX         XX   XX     AADK SHDSTSAMGAELLDLTQVAPLPSPS RRCRES DAAA TSPIGRGRSQHRGL SP  +RR H                       N + AE REVMPSFGQMTLQELAGMMAVYGLKKKSKREMTERLEHIW TLHPAAA  GMSAAGDG  XXXXXXXXXXXXX  RDAPSRDS   PS+ LSAS +G RRSR AAEARPT S
Sbjct:  382 KLAAHRTLGARLSAGAGGVPSESSGXXXXGAPKTAEEVVDIIFADEHGAAAAAAGIGSGARTPLRVSTSRLSEEGRAQQRGATLLSSSPSSSSPVSLLSKGTAVADAAGGGSDAASGERPTTVPRRSRRERA-------KGTPAPLPAPEEDGASXXXXXXXXXXXXXFVAGARGTPPSGDNPRYDGDKGCWGDD-XXXXXXXXXGVGRLIRRRSGGGANGNGQRSTPGGDGSRARRGRTLWAIAQGADELSQSDFVTGVFADIRANSTGGVGGGAGGKPHAAKPGRRAAVTAAAYGDARLYNRRVVSSAAASPSALSSTLCSDQGD------------TDEGMGGGRPGKSEREQSASQLNPSDENGGSGXDGDDAVDDVIQLLSQTLSQASVSGXXXXXXXXXXXXXXXXXXXXXXXXXXAERFAARHIARAPVSSLSGLFPNWKENVGFVFRQGAAELQEALQGIVTALSEE-------------------------------EEKEAEALVFFEGVILEALEARGPACSRQLAFLGEERRRDDGSHSPGFEVGSPQTWRRGSEGVGIGRNGGGAVTPGSDSPPRGGANSVQDSGFALEGPEERGSERYDGGGSENGEGQARVDGESGDHLSVADEATGLEETHATTAENNGHDAEPAAVGTDDGDAGTQSVGHPHHGDSSVEAIVLSGDSTASAVVTFDLTSSESSKRCSSAGDIXXXXXXXXXXXXXXXXAAGLAEFPVGADGGGRNSGRGVTARARNGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRR---KSHRGVTASVRNCQRKXXXXXXVXXXXXXXXXXXXXXGANGPDSTDERGEASGDSDDVVDEYALEDEYGFDDHDYCAWGDENDLSFVPSPDIDGVADERQPXXXXXXXXXXXXXXXXXXXXXXXXXXXAAADKVSHDSTSAMGAELLDLTQVAPLPSPSLRRCRESLDAAAATSPIGRGRSQHRGLESPATARRRHHCTPSSPPVEGEEGASSPTAVGGNEDIAELREVMPSFGQMTLQELAGMMAVYGLKKKSKREMTERLEHIWKTLHPAAAEEGMSAAGDGNAXXXXXXXXXXXXXXXRDAPSRDSGGDPSAYLSASSQGHRRSRGAAEARPTSS 1467

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BLAST of mRNA_Ecto-sp13_S_contig12795.2310.1 vs. uniprot
Match: D8LCH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH0_ECTSI)

HSP 1 Score: 868 bits (2242), Expect = 3.080e-295
Identity = 644/829 (77.68%), Postives = 668/829 (80.58%), Query Frame = 1

Query:  694 SRARRGRTLWAIAQGAGELSQSHFVTGVFADFRANSTGGVRGGAGGKPHAAKPRRRAAVTAAAYGDARLYNRRVGSSAAASPSALSSTLCSDQGDIDAATRSAVAADTDEGMGGGLPGKSGREQSASQLNPSDENGXXXXXX--AIDDAIQLLSQTLSQASVSLGXXXXXXXXXXXXXXXXXXXXXXXXVERFAARHIARAPVSSLSGLFPNWKENVVFVFRQGAAELHEALQGIVAALSEXXXXXXXXXXXXXXXRGGEGAGTEGCPSGVRTRSRKAEALMFFEGIILEALEARGPACSRQSASLGE-----DGSRSPGFEVGSPQTRRRGSEGVGSGRNGGGAATPGSDSPPRDGASSVQDKGFAFEEQEESRRTRDD-VGGSEGGEGQAXXXXESGDHLSVADEATGLEETHAATAEN-GNDAELAAGGADDGDAGTRSGGHPHHGDSSVEAIVLSGDSTASAVVTFDLTSSEASKRCSTAGDTATAAXXXXGGVAVAGLAELPVGADGSSRNSGRGVTARVRNGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------KSHRGVTASGRNGXXXXXXXXXXXXXXXXXXXXXXXXGANGSGSADERGEVNGDGDDVVDEYALEDEYGFDDHDYCAWGDENDLSFVPSPDIDGVADERQPPPXXXXXSPPLSPTQRXXDIDXXAAPAADKASHDSTSAMGAELLDLTQVAPLPSPSPRRCRESPDAAATTSPIGRGRSQHRGLGSPTASRRGHXXXXXXXXXXXXXXXXXXXXXXXN-GEDAEPREVMPSFGQMTLQELAGMMAVYGLKKKSKR 3126
            SR RRGRTLWAIAQGA ELSQS+FVTGVFAD +ANS G V GGAGGKP AAKP RRAAVTAAAYGDARLYNRRVGSSAAAS SALSSTLCS++G IDAATRSA AADTD+GMGGG PGKS REQS SQLNPSDENG        A+DDAIQLLSQTLSQASVS                           ER AARHIARAPVS+LSGLFPNWKENV+FVFRQGAAEL  ALQGIVAALSEXXXXXXXXXXXXXXX     AG EG PSGVR RSRKAEAL+FFEG++LEALE RGPACSR+SASLGE     DGSRSPGFE GS QT  RGSEGVG G   G AATPGSDSPPR GASSVQD  FA EEQEES R RDD  G SEGG GQA    E GDHLSVADEA G EETHAATAEN G+DAE AA GADDGDAG RS GHPHHGDSSVEAIVLSGDSTASAVVTFDLTSSEASKRCS+AGDTA  A    GGVA AG+AE PVGADGS RNSGRGVTAR++NGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        KSHRGVT SGRN      XXXXXXXXXXX  XXXXX GANG GS DERGE +GDG D++D+YALEDEYGFDDH+YCAWGDENDLSFVPSPD DGVADERQP  XXXXX         XX   XX    ADKASHDSTSA+G ELLDLTQVAPLPSPSPRRCRE  DAAA TSPIGRGRSQHRGL SP A     XXXXXXXXXXXXXXXXXXXXXXX  G+DAE REVMPSFGQMTLQELAGMMAVYGLKKKSKR
Sbjct:  260 SRVRRGRTLWAIAQGADELSQSNFVTGVFADIKANSIGSVGGGAGGKPQAAKPGRRAAVTAAAYGDARLYNRRVGSSAAASASALSSTLCSNRGGIDAATRSADAADTDKGMGGGRPGKSEREQSVSQLNPSDENGGGGGDGNDAVDDAIQLLSQTLSQASVS---GRGGTASAQDGGQENSGKKQEEEAERSAARHIARAPVSALSGLFPNWKENVIFVFRQGAAELRLALQGIVAALSEXXXXXXXXXXXXXXXXXXXXAGPEGRPSGVRRRSRKAEALVFFEGVVLEALELRGPACSRRSASLGEESGREDGSRSPGFEAGSRQTLHRGSEGVGDGITSGDAATPGSDSPPRGGASSVQDNVFALEEQEESARKRDDGAGASEGGVGQAGGDGEDGDHLSVADEAMGFEETHAATAENDGHDAEPAAVGADDGDAGMRSVGHPHHGDSSVEAIVLSGDSTASAVVTFDLTSSEASKRCSSAGDTAATAAA--GGVAAAGIAEYPVGADGSGRNSGRGVTARIKNGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSRKSHRGVTTSGRN---CQRXXXXXXXXXXXMTXXXXXDGANGPGSTDERGEASGDGSDIIDQYALEDEYGFDDHNYCAWGDENDLSFVPSPDSDGVADERQPXXXXXXXXXXXXXXXXXXXXXXXXXXXADKASHDSTSAVGDELLDLTQVAPLPSPSPRRCREPLDAAAATSPIGRGRSQHRGLESPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDDAELREVMPSFGQMTLQELAGMMAVYGLKKKSKR 1080

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig12795.2310.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig12795.2310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5J8H1_9PHAE	0.000e+0	70.79	Structure-specific endonuclease subunit SLX4 n=1 T...	[more]
D8LCH0_ECTSI	3.080e-295	77.68	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig12795	contig	Ecto-sp13_S_contig12795:131..4689 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	0
Model size	3648
Hectar predicted targeting category	other localisation
Exons	4
Ec32 ortholog description	expressed unknown protein
Ec32 ortholog	Ec-26_005020.1
Cds size	3648

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462684.411273-CDS-Ecto-sp13_S_contig12795:130..346	1681462684.411273-CDS-Ecto-sp13_S_contig12795:130..346	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig12795 131..346 -
1681462684.4215653-CDS-Ecto-sp13_S_contig12795:568..875	1681462684.4215653-CDS-Ecto-sp13_S_contig12795:568..875	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig12795 569..875 -
1681462684.4361749-CDS-Ecto-sp13_S_contig12795:1240..4254	1681462684.4361749-CDS-Ecto-sp13_S_contig12795:1240..4254	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig12795 1241..4254 -
1681462684.4452004-CDS-Ecto-sp13_S_contig12795:4578..4689	1681462684.4452004-CDS-Ecto-sp13_S_contig12795:4578..4689	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig12795 4579..4689 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig12795.2310.1	prot_Ecto-sp13_S_contig12795.2310.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig12795 131..4689 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig12795:131..4689-
coding sequence from alignment at Ecto-sp13_S_contig12795:131..4689-

protein sequence of mRNA_Ecto-sp13_S_contig12795.2310.1

>prot_Ecto-sp13_S_contig12795.2310.1 ID=prot_Ecto-sp13_S_contig12795.2310.1|Name=mRNA_Ecto-sp13_S_contig12795.2310.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1216bp
RLAAHRTFGARLSAGAGGVPSESGGGDGGGAPKTAEEVVDIIFADEHGVA
AAAGIGGDAGTPLPVSTSLLSEGGRSQQRGAGLPSSSSSSSSSSSPVSLL
SKGTAVAAAAAAAAAAGADAASGERPTTEPRRSRRERAEGTPAPLLAAEE
DGASDGAAGKGGGGGGGFVAGARGTPLSGDKPRYDDDKGCWGDDGDDDED
DDTGVGRLIRRRSSGGANDNGQRSTTPGGGGSRARRGRTLWAIAQGAGEL
SQSHFVTGVFADFRANSTGGVRGGAGGKPHAAKPRRRAAVTAAAYGDARL
YNRRVGSSAAASPSALSSTLCSDQGDIDAATRSAVAADTDEGMGGGLPGK
SGREQSASQLNPSDENGGGGGDDAIDDAIQLLSQTLSQASVSLGGGGTAS
AQDGGQENGGKKQEEEEEVERFAARHIARAPVSSLSGLFPNWKENVVFVF
RQGAAELHEALQGIVAALSEEEEEKAATVAGGGGGRGGEGAGTEGCPSGV
RTRSRKAEALMFFEGIILEALEARGPACSRQSASLGEDGSRSPGFEVGSP
QTRRRGSEGVGSGRNGGGAATPGSDSPPRDGASSVQDKGFAFEEQEESRR
TRDDVGGSEGGEGQAGGDGESGDHLSVADEATGLEETHAATAENGNDAEL
AAGGADDGDAGTRSGGHPHHGDSSVEAIVLSGDSTASAVVTFDLTSSEAS
KRCSTAGDTATAAAAAAGGVAVAGLAELPVGADGSSRNSGRGVTARVRNG
QEEEEEEEEEEEEDYTFAIVDSGGGGGGRAKDTDSSSRKSHRGVTASGRN
GRRKEEEEEDDEFARMDSGGGGGGGGANGSGSADERGEVNGDGDDVVDEY
ALEDEYGFDDHDYCAWGDENDLSFVPSPDIDGVADERQPPPPPPPPSPPL
SPTQRPPDIDPPAAPAADKASHDSTSAMGAELLDLTQVAPLPSPSPRRCR
ESPDAAATTSPIGRGRSQHRGLGSPTASRRGHHRTSSSPPVDEEEGTPSS
SAGGGNGEDAEPREVMPSFGQMTLQELAGMMAVYGLKKKSKREMTERLEH
IWNTLHPAAANGGMSAAGDGTATASSSSSSSSRCRKRDAPSRDSSDGPSS
CLSASPEGRRRSRAAAEARPTFSPAAPAPAVTVASSTSIPRRPPLSRPPR
RGGVPGGGRSRRGRIPQEEEAVPPLLFTCGSQPPQQQQQEFLAESSSGGK
GGDADLGERIRGVIM*

mRNA from alignment at Ecto-sp13_S_contig12795:131..4689-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig12795.2310.1 ID=mRNA_Ecto-sp13_S_contig12795.2310.1|Name=mRNA_Ecto-sp13_S_contig12795.2310.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4559bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12795:131..4689- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGCTTGCGGCCCACCGCACTTTCGGTGCGCGCTTGTCCGCTGGGGCAGG
CGGGGTACCCAGCGAGAGCGGCGGCGGCGACGGCGGCGGGGCCCCCAAGA
CCGCGGAGGAGGTGAGGCATCGCTGGTTCGGCGGCGGTTCAGATCACAGA
AGAAGTCCCAATTCCGCGTATTCTCGTTTTTGTATATATGGCTCCGGTCG
GGGCAGCTCGCTTGTTCTTTTTGCCGAGAAGGTTCAGTTTGTGGTGGGGG
GGGGGGGGGGGCGCACTGAAGTTTATGGTTTTAGTTGGAAATGGAAGCAA
CAAGTTTTCGTGGTGTTTCTCTGCAAAGGTTCTGATTGTCCCTCCCCTTT
TCCCTTGCCCCGCCATCTCTCCCTCCTTTCCGGTGGCATCACGTTTCTCT
CGTCGCTTGGGTGTTGTAAAAATCACCCGAAAAAGGTTGTGGATATCATT
TTCGCCGATGAGCACGGGGTCGCCGCCGCCGCCGGCATCGGCGGCGACGC
GGGAACGCCGTTACCCGTGTCGACAAGCCTCCTGTCCGAGGGGGGGCGTT
CGCAACAGCGGGGAGCAGGGTTGCCGTCGTCGTCGTCGTCGTCGTCGTCC
TCATCATCCCCGGTGTCTCTGTTGTCGAAAGGGACGGCGGTCGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGGCGCTGATGCTGCGTCGGGAGAGCGAC
CGACCACGGAACCACGACGCAGCCGACGAGAACGGGCTGAGGGAACTCCC
GCGCCCCTCCTCGCGGCAGAGGAGGACGGTGCGTCGGACGGAGCGGCCGG
AAAAGGAGGAGGAGGAGGAGGAGGGTTTGTCGCTGGTGCTCGCGGCACAC
CTCTCTCCGGCGATAAGCCGCGGTACGACGACGATAAGGGTTGTTGGGGC
GATGATGGTGACGACGATGAAGACGACGATACAGGAGTGGGGAGGTTGAT
TCGTCGTCGGAGTAGCGGGGGCGCTAACGACAACGGGCAGCGCTCGACGA
CGCCGGGCGGAGGCGGGAGTAGGGCTAGGCGTGGGAGGACGCTGTGGGCC
ATCGCTCAGGGGGCGGGCGAGCTGAGTCAGTCCCACTTCGTGACGGGAGT
GTTCGCAGACTTCAGGGCCAACTCCACCGGTGGCGTGAGAGGAGGGGCGG
GTGGGAAGCCGCACGCCGCCAAGCCGAGACGTCGGGCGGCAGTGACGGCC
GCGGCGTACGGCGACGCGAGGCTGTACAACCGCCGCGTTGGGTCTTCCGC
CGCTGCTTCTCCTTCAGCCTTGTCTTCAACCTTGTGCTCCGACCAAGGAG
ACATCGACGCTGCCACTCGCTCTGCCGTCGCTGCTGACACCGACGAAGGA
ATGGGCGGGGGTCTGCCAGGGAAAAGCGGAAGGGAACAGAGCGCGAGCCA
GCTTAACCCTTCAGATGAGAACGGTGGTGGTGGTGGCGACGATGCCATTG
ATGACGCCATTCAGCTGCTGTCGCAAACGCTATCACAGGCTTCGGTGTCG
CTTGGCGGCGGAGGGACAGCCTCTGCACAGGACGGAGGACAGGAGAACGG
GGGCAAGAAGCAAGAGGAGGAGGAGGAGGTGGAGAGGTTCGCCGCTAGGC
ACATCGCGCGGGCGCCGGTGTCGTCTCTCTCCGGGCTCTTCCCCAACTGG
AAAGAGAACGTCGTTTTCGTGTTCCGGCAGGGAGCGGCGGAGCTCCACGA
AGCGCTGCAGGGCATCGTAGCCGCGTTGTCCGAGGAGGAGGAGGAGAAAG
CGGCGACGGTCGCAGGCGGGGGAGGAGGAAGAGGGGGGGAGGGCGCGGGT
ACGGAGGGGTGCCCTAGTGGTGTTCGTACGAGAAGCAGAAAGGCGGAGGC
GTTGATGTTCTTCGAAGGCATTATTCTCGAGGCGTTGGAAGCGAGGGGTC
CGGCTTGTAGTAGGCAGTCGGCTTCTTTGGGGGAGGATGGCAGCCGCAGC
CCGGGGTTCGAAGTAGGGTCCCCGCAGACACGGCGCCGTGGGAGTGAGGG
CGTCGGTAGTGGTAGAAATGGCGGTGGCGCCGCAACACCTGGAAGCGATA
GCCCCCCCCGCGATGGTGCGAGCAGCGTTCAAGATAAGGGTTTCGCGTTT
GAAGAACAGGAAGAAAGCAGGAGAACGAGAGACGACGTCGGCGGAAGCGA
AGGCGGCGAAGGTCAGGCCGGAGGAGACGGCGAGAGTGGAGATCACCTTT
CGGTTGCCGATGAGGCGACGGGGCTCGAGGAGACGCACGCCGCCACCGCT
GAGAATGGCAATGACGCCGAGCTTGCTGCTGGTGGAGCAGACGACGGCGA
CGCAGGCACGCGGAGCGGTGGGCACCCCCACCACGGAGATAGCAGCGTGG
AGGCCATCGTGCTCAGCGGCGACTCCACCGCGTCAGCGGTGGTCACCTTC
GACCTCACAAGCTCGGAAGCCAGCAAGCGTTGTTCTACCGCCGGTGACAC
CGCCACCGCCGCCGCCGCCGCCGCCGGTGGCGTTGCCGTGGCAGGGTTAG
CTGAGCTGCCGGTCGGTGCTGACGGTAGCAGTCGGAACTCCGGCCGAGGC
GTCACGGCAAGGGTACGGAATGGTCAAGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAAGATTACACGTTTGCGATCGTGGACAGCGGCGGCGGCG
GCGGAGGTAGAGCCAAAGATACTGACAGTAGTAGTCGGAAGTCCCACCGA
GGCGTCACGGCAAGCGGAAGGAATGGCCGAAGAAAGGAGGAGGAGGAAGA
AGATGACGAGTTTGCGAGGATGGACAGCGGCGGCGGCGGTGGCGGAGGTG
GCGCCAATGGCTCGGGCTCAGCCGACGAGAGAGGCGAAGTTAACGGTGAC
GGTGACGACGTCGTCGACGAGTACGCCCTGGAAGACGAGTACGGCTTCGA
CGACCATGACTATTGCGCCTGGGGTGACGAAAACGACTTGTCGTTTGTTC
CTTCGCCCGACATCGACGGCGTCGCCGACGAGCGGCAGCCGCCGCCGCCG
CCGCCGCCGCCGTCACCGCCGCTTTCGCCGACACAACGACCCCCCGATAT
TGATCCCCCCGCTGCTCCTGCCGCTGACAAAGCCTCGCACGATTCGACGT
CGGCGATGGGGGCCGAGCTGCTGGATCTCACGCAGGTAGCACCGCTACCG
TCCCCGTCGCCCAGACGCTGCCGTGAGTCTCCAGACGCGGCAGCTACGAC
ATCGCCCATCGGTCGGGGTCGTTCGCAACATCGCGGACTTGGAAGTCCGA
CGGCGTCGCGGCGCGGGCATCACCGCACATCGTCATCCCCTCCGGTAGAC
GAAGAGGAGGGGACTCCGTCTTCGAGTGCCGGAGGGGGGAACGGCGAAGA
TGCCGAGCCGCGGGAGGTGATGCCTTCGTTCGGGCAGATGACGCTCCAGG
AGCTGGCCGGGATGATGGCGGTGTACGGGCTGAAGAAGAAATCTAAGAGG
TTCGTGTGCCTCTTGTTCGTGCCTCCTCGTTGTGAGGTTAGACTCGGCAG
CATGTTGGGAGGGGCGTCCAACAGGGGTACTCGCAGTGCTCCGTCTTGGA
TAGACATCTACGAAATACTTCGGCTCTATTTCTTTCATTCCCTCAATCTG
TCGTTTCCCGAAGGTTGTGTACTTGCAACAGCAAGGCATAGCGCATACCC
TCGAGTTGCTTGCTATACAGAAACTCCGCAAAAAAACGCTTCGAAGGTGC
AGTGACACTGTGGTACGTACCAGCAATGACGCTCCGTTTCGAGGTTCCTC
CCTCACATACCCTTCTTGTGCTAAAAACGCCCCCTCCGCATGCCCAACCC
CCTGTGATCCGTAGGGAGATGACAGAACGCCTGGAACACATCTGGAACAC
CCTGCACCCCGCTGCCGCCAACGGAGGCATGTCTGCGGCGGGGGACGGAA
CCGCAACTGCTTCTTCTTCGTCATCGTCGTCCAGTAGATGCAGAAAGCGA
GACGCGCCGTCTCGTGATAGCAGTGACGGTCCCTCTTCTTGTCTGTCGGC
GTCTCCGGAAGGTCGTCGGCGCAGTAGAGCGGCGGCAGAGGCGAGACCCA
CGTTTTCGCCGGCGGCGCCGGCGCCGGCGGTGACGGTGGCGTCATCGACG
AGCATTCCACGGCGCCCCCCGGTAAGCCAGCTGCTTGCTGCGTAAGAGAA
AACGAGCTTGTTGTGAATATTTACTCTGTTTGATGAAAACGATAAGGATT
ATTCGGATACAAATGTCAATGTTGCAATGGCCCCCATGATGCTGAGGCAG
CATATTTTGTCCATGATGCTCCTGTGCCTTATTTCGTCTGTGTTGTTTTT
TCCATCTCCTCGCCCGGCTGGTCCGCCACCCCTTTCGAAATAGCTCTCCA
GGCCGCCCCGACGTGGCGGTGTCCCAGGTGGTGGTCGTAGTCGAAGGGGG
CGGATTCCGCAGGAAGAAGAGGCGGTGCCCCCGCTGCTTTTTACGTGCGG
GTCTCAGCCGCCGCAGCAGCAGCAGCAAGAGTTTCTTGCCGAGAGCAGCA
GCGGGGGGAAAGGAGGCGACGCAGACCTCGGAGAGAGAATACGCGGCGTA
ATCATGTGA

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12795:131..4689-

>mRNA_Ecto-sp13_S_contig12795.2310.1 ID=mRNA_Ecto-sp13_S_contig12795.2310.1|Name=mRNA_Ecto-sp13_S_contig12795.2310.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3648bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12795:131..4689- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGCTTGCGGCCCACCGCACTTTCGGTGCGCGCTTGTCCGCTGGGGCAGG
CGGGGTACCCAGCGAGAGCGGCGGCGGCGACGGCGGCGGGGCCCCCAAGA
CCGCGGAGGAGGTTGTGGATATCATTTTCGCCGATGAGCACGGGGTCGCC
GCCGCCGCCGGCATCGGCGGCGACGCGGGAACGCCGTTACCCGTGTCGAC
AAGCCTCCTGTCCGAGGGGGGGCGTTCGCAACAGCGGGGAGCAGGGTTGC
CGTCGTCGTCGTCGTCGTCGTCGTCCTCATCATCCCCGGTGTCTCTGTTG
TCGAAAGGGACGGCGGTCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGG
CGCTGATGCTGCGTCGGGAGAGCGACCGACCACGGAACCACGACGCAGCC
GACGAGAACGGGCTGAGGGAACTCCCGCGCCCCTCCTCGCGGCAGAGGAG
GACGGTGCGTCGGACGGAGCGGCCGGAAAAGGAGGAGGAGGAGGAGGAGG
GTTTGTCGCTGGTGCTCGCGGCACACCTCTCTCCGGCGATAAGCCGCGGT
ACGACGACGATAAGGGTTGTTGGGGCGATGATGGTGACGACGATGAAGAC
GACGATACAGGAGTGGGGAGGTTGATTCGTCGTCGGAGTAGCGGGGGCGC
TAACGACAACGGGCAGCGCTCGACGACGCCGGGCGGAGGCGGGAGTAGGG
CTAGGCGTGGGAGGACGCTGTGGGCCATCGCTCAGGGGGCGGGCGAGCTG
AGTCAGTCCCACTTCGTGACGGGAGTGTTCGCAGACTTCAGGGCCAACTC
CACCGGTGGCGTGAGAGGAGGGGCGGGTGGGAAGCCGCACGCCGCCAAGC
CGAGACGTCGGGCGGCAGTGACGGCCGCGGCGTACGGCGACGCGAGGCTG
TACAACCGCCGCGTTGGGTCTTCCGCCGCTGCTTCTCCTTCAGCCTTGTC
TTCAACCTTGTGCTCCGACCAAGGAGACATCGACGCTGCCACTCGCTCTG
CCGTCGCTGCTGACACCGACGAAGGAATGGGCGGGGGTCTGCCAGGGAAA
AGCGGAAGGGAACAGAGCGCGAGCCAGCTTAACCCTTCAGATGAGAACGG
TGGTGGTGGTGGCGACGATGCCATTGATGACGCCATTCAGCTGCTGTCGC
AAACGCTATCACAGGCTTCGGTGTCGCTTGGCGGCGGAGGGACAGCCTCT
GCACAGGACGGAGGACAGGAGAACGGGGGCAAGAAGCAAGAGGAGGAGGA
GGAGGTGGAGAGGTTCGCCGCTAGGCACATCGCGCGGGCGCCGGTGTCGT
CTCTCTCCGGGCTCTTCCCCAACTGGAAAGAGAACGTCGTTTTCGTGTTC
CGGCAGGGAGCGGCGGAGCTCCACGAAGCGCTGCAGGGCATCGTAGCCGC
GTTGTCCGAGGAGGAGGAGGAGAAAGCGGCGACGGTCGCAGGCGGGGGAG
GAGGAAGAGGGGGGGAGGGCGCGGGTACGGAGGGGTGCCCTAGTGGTGTT
CGTACGAGAAGCAGAAAGGCGGAGGCGTTGATGTTCTTCGAAGGCATTAT
TCTCGAGGCGTTGGAAGCGAGGGGTCCGGCTTGTAGTAGGCAGTCGGCTT
CTTTGGGGGAGGATGGCAGCCGCAGCCCGGGGTTCGAAGTAGGGTCCCCG
CAGACACGGCGCCGTGGGAGTGAGGGCGTCGGTAGTGGTAGAAATGGCGG
TGGCGCCGCAACACCTGGAAGCGATAGCCCCCCCCGCGATGGTGCGAGCA
GCGTTCAAGATAAGGGTTTCGCGTTTGAAGAACAGGAAGAAAGCAGGAGA
ACGAGAGACGACGTCGGCGGAAGCGAAGGCGGCGAAGGTCAGGCCGGAGG
AGACGGCGAGAGTGGAGATCACCTTTCGGTTGCCGATGAGGCGACGGGGC
TCGAGGAGACGCACGCCGCCACCGCTGAGAATGGCAATGACGCCGAGCTT
GCTGCTGGTGGAGCAGACGACGGCGACGCAGGCACGCGGAGCGGTGGGCA
CCCCCACCACGGAGATAGCAGCGTGGAGGCCATCGTGCTCAGCGGCGACT
CCACCGCGTCAGCGGTGGTCACCTTCGACCTCACAAGCTCGGAAGCCAGC
AAGCGTTGTTCTACCGCCGGTGACACCGCCACCGCCGCCGCCGCCGCCGC
CGGTGGCGTTGCCGTGGCAGGGTTAGCTGAGCTGCCGGTCGGTGCTGACG
GTAGCAGTCGGAACTCCGGCCGAGGCGTCACGGCAAGGGTACGGAATGGT
CAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGATTACACGTT
TGCGATCGTGGACAGCGGCGGCGGCGGCGGAGGTAGAGCCAAAGATACTG
ACAGTAGTAGTCGGAAGTCCCACCGAGGCGTCACGGCAAGCGGAAGGAAT
GGCCGAAGAAAGGAGGAGGAGGAAGAAGATGACGAGTTTGCGAGGATGGA
CAGCGGCGGCGGCGGTGGCGGAGGTGGCGCCAATGGCTCGGGCTCAGCCG
ACGAGAGAGGCGAAGTTAACGGTGACGGTGACGACGTCGTCGACGAGTAC
GCCCTGGAAGACGAGTACGGCTTCGACGACCATGACTATTGCGCCTGGGG
TGACGAAAACGACTTGTCGTTTGTTCCTTCGCCCGACATCGACGGCGTCG
CCGACGAGCGGCAGCCGCCGCCGCCGCCGCCGCCGCCGTCACCGCCGCTT
TCGCCGACACAACGACCCCCCGATATTGATCCCCCCGCTGCTCCTGCCGC
TGACAAAGCCTCGCACGATTCGACGTCGGCGATGGGGGCCGAGCTGCTGG
ATCTCACGCAGGTAGCACCGCTACCGTCCCCGTCGCCCAGACGCTGCCGT
GAGTCTCCAGACGCGGCAGCTACGACATCGCCCATCGGTCGGGGTCGTTC
GCAACATCGCGGACTTGGAAGTCCGACGGCGTCGCGGCGCGGGCATCACC
GCACATCGTCATCCCCTCCGGTAGACGAAGAGGAGGGGACTCCGTCTTCG
AGTGCCGGAGGGGGGAACGGCGAAGATGCCGAGCCGCGGGAGGTGATGCC
TTCGTTCGGGCAGATGACGCTCCAGGAGCTGGCCGGGATGATGGCGGTGT
ACGGGCTGAAGAAGAAATCTAAGAGGGAGATGACAGAACGCCTGGAACAC
ATCTGGAACACCCTGCACCCCGCTGCCGCCAACGGAGGCATGTCTGCGGC
GGGGGACGGAACCGCAACTGCTTCTTCTTCGTCATCGTCGTCCAGTAGAT
GCAGAAAGCGAGACGCGCCGTCTCGTGATAGCAGTGACGGTCCCTCTTCT
TGTCTGTCGGCGTCTCCGGAAGGTCGTCGGCGCAGTAGAGCGGCGGCAGA
GGCGAGACCCACGTTTTCGCCGGCGGCGCCGGCGCCGGCGGTGACGGTGG
CGTCATCGACGAGCATTCCACGGCGCCCCCCGCTCTCCAGGCCGCCCCGA
CGTGGCGGTGTCCCAGGTGGTGGTCGTAGTCGAAGGGGGCGGATTCCGCA
GGAAGAAGAGGCGGTGCCCCCGCTGCTTTTTACGTGCGGGTCTCAGCCGC
CGCAGCAGCAGCAGCAAGAGTTTCTTGCCGAGAGCAGCAGCGGGGGGAAA
GGAGGCGACGCAGACCTCGGAGAGAGAATACGCGGCGTAATCATGTGA