prot_Ecto-sp13_S_contig12791.2307.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12791.2307.1
Unique Nameprot_Ecto-sp13_S_contig12791.2307.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length518
Homology
BLAST of mRNA_Ecto-sp13_S_contig12791.2307.1 vs. uniprot
Match: D8LDH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH5_ECTSI)

HSP 1 Score: 644 bits (1660), Expect = 1.360e-223
Identity = 408/514 (79.38%), Postives = 437/514 (85.02%), Query Frame = 0
Query:    1 MEDFEFLQGKETQAKESLNAAKSIAAAKQNELKEAIKAHNNAKSLVAEIREAEASIARQLRDYAELPMHAASRERLVAEFADWERAQQQEDSAREEEQRLEEELDYDDEQPQMCHNLEAVQDAWNDETTHDFSGDAGFPDNTAESAATRQAEVESEPSRNHGKLSSNQDKDRPRRCRRVCVQEQGQEEASIEDDRPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHRISPAHQVGRGRGRCSS-LANVQRRSSKGKKPLGKSRMAASSQATRFLGVTQQREARTVDHQTVTTGNSKGKGKARGGANILRQDHAASSAHERRMNMGVPRTGLFDEVWIPRKDYLSRTTKTSDWVGFKRKTPTPSQVAGEEGTGRRHRGNRQQEGDRAANQNLPKKRIRSAGQKITPGRSFEGGERAPPRFTAKVRRRSSSSSSVSRAPEAVVETSTNAQTGASSESNAVAFTTTEAAMSTAKAKESPNTNSASKTPAALTRVELSCKTEPAMSEGA 513
            MEDFEFLQGKE QAKESLNAAKS+AAAKQNELKE IKAHNNAKSLVAE+REAEA+IARQLRD AE PMHAASRERLVAEFADWERAQ++EDSAR+EEQRLEEELDYDDEQPQMCHNLEAVQDAWNDETTH+F   AG+PDNT ESAATRQAEVESEPSRN+GK+SSN DKDRPRR R V  QEQGQE              XXXXXXXXXXXXXXXXXXXXXXXXXX      ++RI  A      RGRCSS +ANVQRRSSKGK PLGKSRMA SSQATR LG  QQR+ARTVDHQTV TGNSKGKGKARGGAN LRQDHAASSA+E RMN GVPRTGLF  V  PRK + S TT+T++W+G KRKTP+PSQVAGEEGTGR H GNRQQEG RA +QN+PKKR+RSAGQKITPGR  EGGERAPPRF  K  RRSSSS SV+R PEAV ETSTNAQTGASSESNAVA TTTEA MST +AKESPNT+S S+TPAAL RVELSCKTEPAMSEG+
Sbjct:  236 MEDFEFLQGKEAQAKESLNAAKSVAAAKQNELKETIKAHNNAKSLVAEVREAEANIARQLRDCAEFPMHAASRERLVAEFADWERAQEEEDSARDEEQRLEEELDYDDEQPQMCHNLEAVQDAWNDETTHEFGAVAGYPDNTTESAATRQAEVESEPSRNNGKVSSNHDKDRPRRYRWVGGQEQGQEXXXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXDRDNDAEYRIPLAR-----RGRCSSHVANVQRRSSKGKGPLGKSRMAVSSQATRVLGGAQQRQARTVDHQTVATGNSKGKGKARGGANTLRQDHAASSAYEWRMNKGVPRTGLFGGVRKPRKVFFSGTTETNNWLGIKRKTPSPSQVAGEEGTGRLHHGNRQQEGGRAGDQNIPKKRVRSAGQKITPGRFIEGGERAPPRFAVKFPRRSSSSPSVNRDPEAVAETSTNAQTGASSESNAVATTTTEATMSTGEAKESPNTDSTSETPAALARVELSCKTEPAMSEGS 734          
BLAST of mRNA_Ecto-sp13_S_contig12791.2307.1 vs. uniprot
Match: A0A6H5JNJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ6_9PHAE)

HSP 1 Score: 420 bits (1079), Expect = 1.370e-140
Identity = 302/499 (60.52%), Postives = 331/499 (66.33%), Query Frame = 0
Query:   14 AKESLNAAKSIAAAKQNELKEAIKAHNNAKSLVAEIREAEASIARQLRDYAELPMHAASRERLVAEFADWERAQQQEDSAREEEQRLEEELDYDDEQPQMCHNLEAVQDAWNDETTHDFSGDAGFPDNTAESAATRQAEVESEPSRNHGKLSSNQDKDRPRRCRRVCVQEQGQEEASIEDDRPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHRISPAHQVGRGRGRCSSLANVQRRSSKGKKPLGKSRMAASSQATRFLGVTQQREARTVDHQTVTTGNSKGKGKARGGANILRQDHAASSAHERRMNMGVPRTGLFDEVWIPRKDYLSRTTKTSDWVGFKRKTPTPSQVAGEEGTGRRHRGNRQQEGDRAANQNLPKKRIRSAGQKITPGRSFEGGERAPPRFTAKVRRRSSSSSSVSRAPEAVVETSTNAQTGASSESNAVAFTTTEAAMSTAKAKESPNTNSASKTPAALTRVELSCKTEPAMSEG 512
            AKESLNAAKS+AAAKQNELKEAI AHN  K LVAEIREAEA+I RQLRD AE                                             PQMCHNLEAVQDAWNDETTH+F GD G P N AE +ATRQAEVESE SRN+GK+SSNQDKD+PRR R V  Q QGQ E S EDDRPRXXXXXXXXXXXXXXXXXXXXX               +HRISPAHQ           AN+QRRSSKGK+P G SRMAASSQAT  LG  QQ +ARTVDH+ V+T NS+G+GK RGGANIL+QDH ASSA+ RR+N                                          A EE TGRRH GNRQQ+G RAA+Q++PKKR+RSAGQKITPGR  EG ERAPP+F  K RRRS SS SVSRAP+AV E STNAQTGASSESNAVA TTTEAAM T KA+ESP+T S S+ PAAL RVELSCK EP+MSEG
Sbjct:   16 AKESLNAAKSVAAAKQNELKEAINAHNKTKCLVAEIREAEANIGRQLRDSAE---------------------------------------------PQMCHNLEAVQDAWNDETTHEFGGDPGCPGNNAEPSATRQAEVESESSRNNGKVSSNQDKDKPRRYRCVGFQGQGQAETSTEDDRPRXXXXXXXXXXXXXXXXXXXXX---------------EHRISPAHQ-----------ANLQRRSSKGKEPQGISRMAASSQATHVLGGAQQCQARTVDHEAVSTDNSRGQGKVRGGANILKQDHEASSAYARRIN-----------------------------------------EAREERTGRRHHGNRQQDGGRAADQSIPKKRVRSAGQKITPGRFIEGAERAPPQFAVKFRRRSWSSPSVSRAPDAVAEISTNAQTGASSESNAVATTTTEAAMRTGKAEESPDTESTSEIPAALARVELSCKAEPSMSEG 402          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12791.2307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDH5_ECTSI1.360e-22379.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNJ6_9PHAE1.370e-14060.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..62
NoneNo IPR availableCOILSCoilCoilcoord: 83..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12791contigEcto-sp13_S_contig12791:87..4064 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12791.2307.1mRNA_Ecto-sp13_S_contig12791.2307.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12791 2..4503 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12791.2307.1 ID=prot_Ecto-sp13_S_contig12791.2307.1|Name=mRNA_Ecto-sp13_S_contig12791.2307.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=518bp
MEDFEFLQGKETQAKESLNAAKSIAAAKQNELKEAIKAHNNAKSLVAEIR
EAEASIARQLRDYAELPMHAASRERLVAEFADWERAQQQEDSAREEEQRL
EEELDYDDEQPQMCHNLEAVQDAWNDETTHDFSGDAGFPDNTAESAATRQ
AEVESEPSRNHGKLSSNQDKDRPRRCRRVCVQEQGQEEASIEDDRPRRRY
HPDEQQQEEDDDDDDDDDDDDDDDDDDDGDDDDQHRISPAHQVGRGRGRC
SSLANVQRRSSKGKKPLGKSRMAASSQATRFLGVTQQREARTVDHQTVTT
GNSKGKGKARGGANILRQDHAASSAHERRMNMGVPRTGLFDEVWIPRKDY
LSRTTKTSDWVGFKRKTPTPSQVAGEEGTGRRHRGNRQQEGDRAANQNLP
KKRIRSAGQKITPGRSFEGGERAPPRFTAKVRRRSSSSSSVSRAPEAVVE
TSTNAQTGASSESNAVAFTTTEAAMSTAKAKESPNTNSASKTPAALTRVE
LSCKTEPAMSEGALEHL*
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