prot_Ecto-sp13_S_contig12756.2284.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12756.2284.1
Unique Nameprot_Ecto-sp13_S_contig12756.2284.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length152
Homology
BLAST of mRNA_Ecto-sp13_S_contig12756.2284.1 vs. uniprot
Match: D7FL73_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL73_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 3.790e-70
Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0
Query:   33 MANDASSSIMPTRPPPAYELSFAVEAKLGHGEVIYVCGSCPSLGAKDPSRALRLVTDPSSYPVWSSAPVPVPLNKKVSYRYCVVAGGKLKRWEDISVDRELDPVIEPSAATAIVEDVLDK 152
            MANDASSSIMPTRPPPAYELSFAVEAKLGHGEVIYVCGSCPSLGAKDPSRALRLVTDPSSYPVWSS PVPVPLNKKV+YRYCVVAGGKLKRWEDISVDRELDPV EPSAATAIVEDVLDK
Sbjct:    1 MANDASSSIMPTRPPPAYELSFAVEAKLGHGEVIYVCGSCPSLGAKDPSRALRLVTDPSSYPVWSSGPVPVPLNKKVTYRYCVVAGGKLKRWEDISVDRELDPVTEPSAATAIVEDVLDK 120          
BLAST of mRNA_Ecto-sp13_S_contig12756.2284.1 vs. uniprot
Match: V5K3Y9_SACJA (Trehalose-6-phosohate synthase n=1 Tax=Saccharina japonica TaxID=88149 RepID=V5K3Y9_SACJA)

HSP 1 Score: 195 bits (496), Expect = 5.850e-55
Identity = 93/108 (86.11%), Postives = 99/108 (91.67%), Query Frame = 0
Query:   45 RPPPAYELSFAVEAKLGHGEVIYVCGSCPSLGAKDPSRALRLVTDPSSYPVWSSAPVPVPLNKKVSYRYCVVAGGKLKRWEDISVDRELDPVIEPSAATAIVEDVLDK 152
            RPPPAYELSF VEAKLGHGEVIYVCGSCPSLG+KDPSRALRLVTDPSSYPVWSS PVPVPL +KV+YRYC+VAGGKLKRWEDI+VDRELDPV E  AA  + EDVLDK
Sbjct:    3 RPPPAYELSFGVEAKLGHGEVIYVCGSCPSLGSKDPSRALRLVTDPSSYPVWSSEPVPVPLGQKVTYRYCIVAGGKLKRWEDIAVDRELDPVKEADAAPVMAEDVLDK 110          
BLAST of mRNA_Ecto-sp13_S_contig12756.2284.1 vs. uniprot
Match: A0A835YZM5_9STRA (Glycosyltransferase family 20-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZM5_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.030e-21
Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 0
Query:   48 PAYELSFAVEAKLGHGEVIYVCGSCPSLGAKDPSRALRLVTDPSSYPVWSSAPVPVPLNKKVSYRYCVVAGGKLKRWEDISVDRELDPVIEPSA 141
            P YE+ F V A+LGHGEV +V G+CPSLG  D   A+ L T P +YP+W S P+ +PL++ V Y+Y V +GG+ KRWE++  DR LD V   +A
Sbjct:    2 PFYEVEFEVTAELGHGEVPFVAGTCPSLGNMDYKSAVLLTTTPDTYPIWRSPPLALPLHQIVLYKYGVFSGGEFKRWEEVIEDRVLDVVTTATA 95          
BLAST of mRNA_Ecto-sp13_S_contig12756.2284.1 vs. uniprot
Match: A0A7S2Y1E9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1E9_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.490e-13
Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = 0
Query:   52 LSFAVEAKLGHGEVIYVCGSCPSLGAKDPSRALRLVTDPSSYPVWSSAPVPVPLNKK---VSYRYCVVAGGKLKRWEDISVD 130
            + F V AK+G GE + VCG+C +LG+   S  ++L T P  YP WSS+ VP+ L+     V YRY +  GG+  RWE+ + D
Sbjct:    8 VGFRVNAKVGFGEEVVVCGNCSALGSNVASHGIKLKTSPEEYPYWSSSLVPLALSSNTFDVKYRYGIFRGGEFLRWEESTSD 89          
BLAST of mRNA_Ecto-sp13_S_contig12756.2284.1 vs. uniprot
Match: A0A2R5GMJ6_9STRA (Alpha,alpha-trehalose-phosphate synthase UDP-forming n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMJ6_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 5.740e-11
Identity = 31/88 (35.23%), Postives = 54/88 (61.36%), Query Frame = 0
Query:   52 LSFAVEAKLGHGEVIYVCGSCPSLGAKDPSRALRLVTDPSSYPVWSSA-PVPVPLNKKVSYRYCVVAGGKLKRWEDISVDRELDPVIE 138
            + F   A +  GE + + G   +LG+ D    ++LVT P  +P W +A P+P+P  + ++YRYC+++GG+L RWED+  D+  +  +E
Sbjct:    9 VGFNAIAPVQRGETVCLVGDVAALGSGDHRYGVQLVTAPDVFPEWYTAQPIPLPAGQVITYRYCILSGGELSRWEDLPGDKPREIFVE 96          
BLAST of mRNA_Ecto-sp13_S_contig12756.2284.1 vs. uniprot
Match: A0A0G4G6Y5_VITBC (CBM20 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G6Y5_VITBC)

HSP 1 Score: 52.0 bits (123), Expect = 6.260e-5
Identity = 27/76 (35.53%), Postives = 42/76 (55.26%), Query Frame = 0
Query:   51 ELSFAVEAKLGHGEVIYVCGSCPSLGAKDPSRALRLVTDPSSYPVWSSAPVPVPLNKKVSYRYCVVAGGKLKRWED 126
            +++F V      GE + + G+  S+G  DP+  + L TD   YP+W SAPV +P +  + Y+Y V  G    RWE+
Sbjct:    4 KVTFMVHCDTCFGESVKLVGNHSSIGDWDPASGIPLATDDVLYPIWVSAPVELPRDGYIEYKY-VKYGEHHTRWEE 78          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12756.2284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FL73_ECTSI3.790e-7097.50Trehalose 6-phosphate synthase, family GT20 / Treh... [more]
V5K3Y9_SACJA5.850e-5586.11Trehalose-6-phosohate synthase n=1 Tax=Saccharina ... [more]
A0A835YZM5_9STRA1.030e-2150.00Glycosyltransferase family 20-domain-containing pr... [more]
A0A7S2Y1E9_9STRA3.490e-1342.68Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A2R5GMJ6_9STRA5.740e-1135.23Alpha,alpha-trehalose-phosphate synthase UDP-formi... [more]
A0A0G4G6Y5_VITBC6.260e-535.53CBM20 domain-containing protein n=1 Tax=Vitrella b... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002044Carbohydrate binding module family 20SMARTSM01065CBM_20_2coord: 49..144
e-value: 1.0E-10
score: 51.6
IPR002044Carbohydrate binding module family 20PFAMPF00686CBM_20coord: 52..127
e-value: 4.4E-13
score: 48.9
IPR002044Carbohydrate binding module family 20PROSITEPS51166CBM20coord: 44..152
score: 14.123
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 40..150
e-value: 1.9E-15
score: 58.3
NoneNo IPR availablePANTHERPTHR15048FAMILY NOT NAMEDcoord: 37..126
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 52..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12756contigEcto-sp13_S_contig12756:1039..1930 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12756.2284.1mRNA_Ecto-sp13_S_contig12756.2284.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12756 1039..1930 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12756.2284.1 ID=prot_Ecto-sp13_S_contig12756.2284.1|Name=mRNA_Ecto-sp13_S_contig12756.2284.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=152bp
TDRLRHLAIDLPVAPPPPKPVGAPQRGPHFGDMANDASSSIMPTRPPPAY
ELSFAVEAKLGHGEVIYVCGSCPSLGAKDPSRALRLVTDPSSYPVWSSAP
VPVPLNKKVSYRYCVVAGGKLKRWEDISVDRELDPVIEPSAATAIVEDVL
DK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002044CBM_fam20
IPR013783Ig-like_fold
IPR013784Carb-bd-like_fold