mRNA_Ecto-sp13_S_contig12747.2276.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12747.2276.1 vs. uniprot
Match: D8LPR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR7_ECTSI) HSP 1 Score: 175 bits (443), Expect = 2.230e-51 Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 1
Query: 352 MGLDSLDLLVVPWPSGTQGHRALSDRGERQRDGDLFLKTWKALQRLVDAGTVRALSVDRFFPWQLDFVIAQPGPRPAVNFLHVS 603
MGLDSLDLLVVPWPSGTQGHRALSDRGERQRDGDLFLKTWKALQRLVDAGTVRAL VDRFFPWQLDFVIAQPGPRPAVNFLHVS
Sbjct: 1 MGLDSLDLLVVPWPSGTQGHRALSDRGERQRDGDLFLKTWKALQRLVDAGTVRALGVDRFFPWQLDFVIAQPGPRPAVNFLHVS 84
BLAST of mRNA_Ecto-sp13_S_contig12747.2276.1 vs. uniprot
Match: F0Y343_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y343_AURAN) HSP 1 Score: 85.9 bits (211), Expect = 6.060e-15 Identity = 71/248 (28.63%), Postives = 111/248 (44.76%), Query Frame = 1
Query: 37 MWSYKYTSSASVFVDQCRVGARLE---------TVTPVSQLVELFTAVSRDQRCKCFFFDAGTEKHLASSFKTLLARPDRD-----------RKSVFVGLTFPADFPCHRSTKAISQRVASFVHAMGLDSLDLLVVPWPS--GTQGHRALSDRGERQRDGDLFLKTWKALQRLVDAGTVRALSVDRFFPWQLDFVIAQPGP--RPAVN----------FLHVSLTSHQETMASYSHARQVEVVASLDT 678
MWS +TSS S FV+ RVG + E + V++ + L A+ + + + D G E + + + D D R + V D CHR++ A + + +G+ LD L VPWP+ G G+ + +R LFL+TWK LQ LV+AG+VR L + WQL+ +I P RPA N + ++L + ++ +R +EV+A LDT
Sbjct: 1 MWSTAFTSSRSHFVETARVGIQAEPPSQARSKASEAAVAEALRL--ALGDNSKFRLILVDRGAEGSVRTVLRPEEIVVDEDSPLAPKDPPPPRSELVVVARLGGD--CHRTSDACVVQTRRILDGLGVAKLDGLCVPWPAALGDGGNDPYHVSADVKRQKRLFLRTWKNLQPLVEAGSVRWLGTEMLETWQLERLIEAVAPEQRPAFNGAAKESDVFNLVSLNLVEPRRRTVTWCQSRGIEVLALLDT 244
BLAST of mRNA_Ecto-sp13_S_contig12747.2276.1 vs. uniprot
Match: A0A484C079_PERFV (Aldo_ket_red domain-containing protein n=4 Tax=Perca TaxID=8166 RepID=A0A484C079_PERFV) HSP 1 Score: 65.9 bits (159), Expect = 1.760e-8 Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 1
Query: 358 LDSLDLLVVPWPSGT-QGHRA--LSDRGERQRDGDLFLKTWKALQRLVDAGTVRALSVDRFFPWQLDFVIAQPGPR--PAVNFLHVSLTSHQETMASYSHARQVEVVA 666
LD LDL ++ +P G QG L + + DG FL TW+A+++LVDAG V+A+ + F Q++ ++ +PG R PA+N + QE + +Y H++ + V A
Sbjct: 90 LDYLDLYLMHFPMGAKQGDELFPLDEHNQLISDGSNFLDTWEAMEKLVDAGLVKAIGISNFNKDQIETLLNKPGLRYKPAINQIECHPYLTQEKLINYCHSKGISVTA 197
BLAST of mRNA_Ecto-sp13_S_contig12747.2276.1 vs. uniprot
Match: A0A0F8AF84_LARCR (Aldo-keto reductase family 1 member B10 n=5 Tax=Sciaenidae TaxID=30870 RepID=A0A0F8AF84_LARCR) HSP 1 Score: 65.5 bits (158), Expect = 2.590e-8 Identity = 41/161 (25.47%), Postives = 80/161 (49.69%), Query Frame = 1
Query: 199 EKHLASSFKTLLARPDRDRKSVFVGLTFPADFPCHRSTKAISQRVASFVHAMGLDSLDLLVVPWPSGTQGHRAL---SDRGERQRDGDLFLKTWKALQRLVDAGTVRALSVDRFFPWQLDFVIAQPGPR--PAVNFLHVSLTSHQETMASYSHARQVEVVA 666
EK + + + ++ + R+ +F+ F + ++ S + LD LDL ++ +P G + L + G+ DG FL TW+A+++LVDAG V+A+ + F Q++ ++ +PG + PA N + QE + +Y H++ + + A
Sbjct: 52 EKEVGAGIRAMIDQQVVKREDLFIVSKLWCTFHIPSLVRGACEKTLS---DLKLDYLDLYLMHFPMGAKPGDELFPTDEHGQLLSDGSNFLDTWEAMEKLVDAGLVKAIGISNFNKDQIETLLNKPGLKYKPATNQIECHPYLTQEKLINYCHSKGISITA 209
BLAST of mRNA_Ecto-sp13_S_contig12747.2276.1 vs. uniprot
Match: A0A665TPP2_ECHNA (Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 1 n=5 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665TPP2_ECHNA) HSP 1 Score: 65.5 bits (158), Expect = 2.630e-8 Identity = 45/161 (27.95%), Postives = 80/161 (49.69%), Query Frame = 1
Query: 199 EKHLASSFKTLLARPDRDRKSVFVGLTFPADFPCHRSTKAISQRVASFVHAMGLDSLDLLVVPWPSGTQ---GHRALSDRGERQRDGDLFLKTWKALQRLVDAGTVRALSVDRFFPWQLDFVIAQPGPR--PAVNFLHVSLTSHQETMASYSHARQVEVVA 666
EK + + + ++ + R+ +FV F K ++ S + LD LDL ++ +P G + L G+ DG FL TW+A+++LVDAG V+A+ + F Q++ V+ +PG + PA N + +QE + +Y H++ + V A
Sbjct: 55 EKEVGAGVRAMIDQGVVKREDLFVVSKLWCTFHLPSLVKGACEKTLS---DLKLDYLDLYLMHFPMGVKPGDDFFPLDVNGQVISDGSNFLDTWEAMEKLVDAGLVKAIGISNFNKDQIEAVLNKPGLKYKPANNQIECHPYLNQEKLINYCHSKGISVTA 212
BLAST of mRNA_Ecto-sp13_S_contig12747.2276.1 vs. uniprot
Match: UPI001E8EED7D (aldo-keto reductase family 1 member B1.1 n=2 Tax=Micropterus TaxID=27705 RepID=UPI001E8EED7D) HSP 1 Score: 64.3 bits (155), Expect = 6.300e-8 Identity = 38/108 (35.19%), Postives = 61/108 (56.48%), Query Frame = 1
Query: 358 LDSLDLLVVPWPSGTQGHRALSDRGERQR---DGDLFLKTWKALQRLVDAGTVRALSVDRFFPWQLDFVIAQPGPR--PAVNFLHVSLTSHQETMASYSHARQVEVVA 666
LD LDL ++ +P GT+ L E + DG FL TW+A+++LVDAG V+A+ V F Q++ ++ +PG + PA N + QE + +Y H++ + V A
Sbjct: 102 LDYLDLYLMHFPMGTKPGDELFPCDEHNQVISDGSNFLDTWEAMEKLVDAGLVKAIGVSNFNKDQIETILNKPGLKYKPANNQIECHPYLTQEKLINYCHSKGISVTA 209
BLAST of mRNA_Ecto-sp13_S_contig12747.2276.1 vs. uniprot
Match: A0A6P7NN33_BETSP (aldo-keto reductase family 1 member B1-like n=1 Tax=Betta splendens TaxID=158456 RepID=A0A6P7NN33_BETSP) HSP 1 Score: 63.9 bits (154), Expect = 8.470e-8 Identity = 37/108 (34.26%), Postives = 61/108 (56.48%), Query Frame = 1
Query: 358 LDSLDLLVVPWPSGTQ-GHRA--LSDRGERQRDGDLFLKTWKALQRLVDAGTVRALSVDRFFPWQLDFVIAQPGPR--PAVNFLHVSLTSHQETMASYSHARQVEVVA 666
LD +DL ++ +P G Q G + L + G+ DG FL TW+A+++LVDAG V+A+ + F Q + ++ +PG + P N + QE + SY H++ + V A
Sbjct: 102 LDYVDLYLMHFPCGAQPGDKLFPLDEHGQLITDGSNFLDTWEAMEKLVDAGLVKAIGISNFNKEQTEAILNKPGLKYKPVNNQIECHPYLTQEKLISYCHSKGISVTA 209
BLAST of mRNA_Ecto-sp13_S_contig12747.2276.1 vs. uniprot
Match: I3KJ93_ORENI (Aldo_ket_red domain-containing protein n=20 Tax=Cichlidae TaxID=8113 RepID=I3KJ93_ORENI) HSP 1 Score: 62.0 bits (149), Expect = 3.740e-7 Identity = 36/108 (33.33%), Postives = 61/108 (56.48%), Query Frame = 1
Query: 358 LDSLDLLVVPWPSGTQGHRAL---SDRGERQRDGDLFLKTWKALQRLVDAGTVRALSVDRFFPWQLDFVIAQPG--PRPAVNFLHVSLTSHQETMASYSHARQVEVVA 666
LD LDL ++ +P GT+ L + G+ D FL TW+A+++LVDAG V+A+ + F Q++ ++ +PG +PA + + QE M +Y H++ + V A
Sbjct: 104 LDYLDLYLMHFPMGTKPGDDLFPVDENGQVISDNSNFLDTWEAMEKLVDAGLVKAIGISNFNKDQIEAILNKPGLKHKPANHQIECHPYLTQEKMINYCHSKGITVTA 211
BLAST of mRNA_Ecto-sp13_S_contig12747.2276.1 vs. uniprot
Match: UPI0016536D83 (aldo-keto reductase family 1 member B1-like n=1 Tax=Sander lucioperca TaxID=283035 RepID=UPI0016536D83) HSP 1 Score: 60.5 bits (145), Expect = 9.320e-7 Identity = 33/98 (33.67%), Postives = 56/98 (57.14%), Query Frame = 1
Query: 379 VVPWPSGTQGHRALSDRGERQRDGDLFLKTWKALQRLVDAGTVRALSVDRFFPWQLDFVIAQPGPR--PAVNFLHVSLTSHQETMASYSHARQVEVVA 666
V+P SG + L + + DG FL TW+A+++LVDAG V+A+ + F +Q++ ++ +PG R PA N + QE + +Y H++ + V A
Sbjct: 51 VLPLQSGDELF-PLDEHSQLISDGSNFLDTWEAMEKLVDAGLVKAIGISNFKKFQIEALLNKPGLRYKPATNQIECHPYLTQEKLINYCHSKGISVTA 147
BLAST of mRNA_Ecto-sp13_S_contig12747.2276.1 vs. uniprot
Match: UPI00101E1A5F (aldo/keto reductase n=1 Tax=Promicromonospora panici TaxID=2219658 RepID=UPI00101E1A5F) HSP 1 Score: 60.5 bits (145), Expect = 9.690e-7 Identity = 33/106 (31.13%), Postives = 54/106 (50.94%), Query Frame = 1
Query: 349 AMGLDSLDLLVVPWPSGTQGHRALSDRGERQRDGDLFLKTWKALQRLVDAGTVRALSVDRFFPWQLDFVIAQPGPRPAVNFLHVSLTSHQETMASYSHARQVEVVA 666
A+GLD +DL ++ WP + DL+++TW+A ++L+D G VRA+ V F P LD ++++ PAVN + + T Q S A + + A
Sbjct: 100 ALGLDVVDLYLIHWPVPRR---------------DLYVETWRAFEKLLDDGAVRAIGVSNFLPEHLDRLVSESEVVPAVNQVEIHPTFRQPATVERSRAHGIVLEA 190 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12747.2276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12747.2276.1 >prot_Ecto-sp13_S_contig12747.2276.1 ID=prot_Ecto-sp13_S_contig12747.2276.1|Name=mRNA_Ecto-sp13_S_contig12747.2276.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=349bp RVSVHKFQESGLMWSYKYTSSASVFVDQCRVGARLETVTPVSQLVELFTAback to top mRNA from alignment at Ecto-sp13_S_contig12747:727..4669+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12747.2276.1 ID=mRNA_Ecto-sp13_S_contig12747.2276.1|Name=mRNA_Ecto-sp13_S_contig12747.2276.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3943bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12747:727..4669+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12747:727..4669+ >mRNA_Ecto-sp13_S_contig12747.2276.1 ID=mRNA_Ecto-sp13_S_contig12747.2276.1|Name=mRNA_Ecto-sp13_S_contig12747.2276.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1047bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12747:727..4669+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |