prot_Ecto-sp13_S_contig12746.2275.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12746.2275.1
Unique Nameprot_Ecto-sp13_S_contig12746.2275.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length105
Homology
BLAST of mRNA_Ecto-sp13_S_contig12746.2275.1 vs. uniprot
Match: A0A836CMU5_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU5_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.480e-43
Identity = 76/104 (73.08%), Postives = 87/104 (83.65%), Query Frame = 0
Query:    1 LPTIVTQAVDAIIEHQGAAEQTEVSQWVADNELIVSKYADTLEHVDSGRRISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYEETGRK 104
            LPT+V QA DA+I HQGAAEQ EV+ W A+ EL VSKYA+ L   D+G RIS+DP +W C DSG TENLWLNLSTGYIGSGR+NWDGSGG+GAAL+HYEETGRK
Sbjct:  161 LPTLVCQAADAVITHQGAAEQAEVASWEAEQELPVSKYAENLPVEDNGVRISNDPSSWKCADSGVTENLWLNLSTGYIGSGRRNWDGSGGSGAALKHYEETGRK 264          
BLAST of mRNA_Ecto-sp13_S_contig12746.2275.1 vs. uniprot
Match: A0A7S2V2B3_9STRA (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B3_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.660e-40
Identity = 65/103 (63.11%), Postives = 81/103 (78.64%), Query Frame = 0
Query:    1 LPTIVTQAVDAIIEHQGAAEQTEVSQWVADNELIVSKYADTLEHVDSGRRISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYEETGR 103
            LP +V QAV+AII HQGAA   +V QW  D ++ VSKYA+ L  +D+G++IS DP TW CE+SG  ENLWLNLSTG+IGSGR  WDG+GGTGAAL+H+ ETG+
Sbjct:   37 LPELVLQAVEAIIAHQGAATMDQVDQWTMDEDVPVSKYAENLVQLDNGKKISPDPATWACEESGMKENLWLNLSTGHIGSGRPMWDGTGGTGAALKHFNETGQ 139          
BLAST of mRNA_Ecto-sp13_S_contig12746.2275.1 vs. uniprot
Match: A0A7R9Y9N6_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9N6_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.680e-38
Identity = 66/104 (63.46%), Postives = 82/104 (78.85%), Query Frame = 0
Query:    1 LPTIVTQAVDAIIEHQGAAEQTEVSQWVADNELIVSKYADTLEHVDSGRRISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYEETGRK 104
            +P +V      +IEHQG ++Q +++QWV D EL  SKYA+ LE +D+G +ISSDP TW CEDSG TENLWLNLSTGYIGSGR+NWDGSGGT  AL+H+E TG+K
Sbjct:  145 IPEMVVVVARQVIEHQGYSDQQDLAQWVDDEELKESKYAEALEQLDNGVKISSDPSTWKCEDSGMTENLWLNLSTGYIGSGRRNWDGSGGTNGALKHFEATGQK 248          
BLAST of mRNA_Ecto-sp13_S_contig12746.2275.1 vs. uniprot
Match: D8LDI4_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDI4_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 2.860e-38
Identity = 83/135 (61.48%), Postives = 88/135 (65.19%), Query Frame = 0
Query:    1 LPTIVTQAVDAIIEHQGAAEQTEVSQWVADNELIVSKYADTLEHVDSGRRISSDPKTWVCEDSGKTEN-------------------------------LWLNLSTGYIGSGRQNWDGSGGTGAALRHYEETGRK 104
            LPTIV+QAVDAIIEHQGAAEQTE SQWVADNELIVSKYADTLEHVDSGRRISS+P+        K                                  L+  +  GYIGSGRQNWDGSGGTGAALRHYEETGRK
Sbjct:  162 LPTIVSQAVDAIIEHQGAAEQTEGSQWVADNELIVSKYADTLEHVDSGRRISSEPQDVGVRKQRKDGEPLAQPVHRQAPCGVSSRDRCLEVTKPVPYVLLFPRVFPGYIGSGRQNWDGSGGTGAALRHYEETGRK 296          
BLAST of mRNA_Ecto-sp13_S_contig12746.2275.1 vs. uniprot
Match: A0A7R9VT46_9CHLO (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VT46_9CHLO)

HSP 1 Score: 138 bits (347), Expect = 6.640e-37
Identity = 65/104 (62.50%), Postives = 82/104 (78.85%), Query Frame = 0
Query:    1 LPTIVTQAVDAIIEHQGAAEQTEVSQWVADNELIVSKYADTLEHVDSGRRISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYEETGRK 104
            LP +V Q VDAI +H  A++Q EV+ W  + E  VS+YA+ L  +D+GRRIS DPK W CE++G+T NLWLNLSTG+IGSGR+NWDGSGG G+ALRH+E TGRK
Sbjct:  138 LPELVLQVVDAITKHDAASDQAEVAVW--EEEAKVSRYAEGLPQLDTGRRISPDPKDWRCEETGETGNLWLNLSTGFIGSGRRNWDGSGGNGSALRHFEATGRK 239          
BLAST of mRNA_Ecto-sp13_S_contig12746.2275.1 vs. uniprot
Match: A0A2R5GGB5_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGB5_9STRA)

HSP 1 Score: 138 bits (348), Expect = 7.600e-36
Identity = 69/105 (65.71%), Postives = 80/105 (76.19%), Query Frame = 0
Query:    1 LPTIVTQAVDAIIEHQGAAEQTEVSQWVADNELI-VSKYADTLEHVDSGRRISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYEETGRK 104
            LP  + +A DAII  + A+ Q E   W A  E   VSK+A+ LE +D+G RIS DPKTW CEDSG TENLWLNLSTGYIGSGR+NWDGSGGTGAAL+H+E TGRK
Sbjct:  151 LPASLLEAADAIIAMEDASSQREFEAWDASEEKRPVSKFAENLEQLDNGVRISPDPKTWRCEDSGLTENLWLNLSTGYIGSGRRNWDGSGGTGAALKHFEATGRK 255          
BLAST of mRNA_Ecto-sp13_S_contig12746.2275.1 vs. uniprot
Match: A0A7S1SZS2_9CHLO (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SZS2_9CHLO)

HSP 1 Score: 133 bits (335), Expect = 4.310e-34
Identity = 62/105 (59.05%), Postives = 83/105 (79.05%), Query Frame = 0
Query:    1 LPTIVTQAVDAIIEHQGAAEQTEVSQWVADNELIVSKYADTLEHVDS-GRRISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYEETGRK 104
            LP +V QA++A++ H+ A +Q EVS W  + E  VSKYA++LE + + G+ I SDP  W C++SG TENLWLNLSTG+IGSGRQNWDGSGG GAA+RH+++TG+K
Sbjct:  135 LPEVVLQAINAVVAHEAAGKQEEVSVW--EEERAVSKYAESLEQLPANGKVIPSDPSQWKCDESGATENLWLNLSTGFIGSGRQNWDGSGGNGAAIRHFDQTGKK 237          
BLAST of mRNA_Ecto-sp13_S_contig12746.2275.1 vs. uniprot
Match: A0A7R9TGP0_9VIRI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TGP0_9VIRI)

HSP 1 Score: 132 bits (332), Expect = 1.090e-33
Identity = 64/104 (61.54%), Postives = 77/104 (74.04%), Query Frame = 0
Query:    1 LPTIVTQAVDAIIEHQGAAEQTEVSQWVADNELIVSKYADTLEHVDSGRRISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYEETGRK 104
            LP  V +A + ++   GA     V  +VAD E  VSKYA++LE +D+G +IS DP TW CE+SG TENLWLNLSTG+IGSGR+NWDGSGGTGAAL HYE TG K
Sbjct:  151 LPERVIEAANGVLAAAGAERTAAVDAFVADEERKVSKYAESLEQLDNGVKISPDPTTWKCEESGMTENLWLNLSTGHIGSGRRNWDGSGGTGAALTHYEATGSK 254          
BLAST of mRNA_Ecto-sp13_S_contig12746.2275.1 vs. uniprot
Match: A0A448ZMX3_9STRA (UBP-type domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZMX3_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.950e-33
Identity = 57/104 (54.81%), Postives = 76/104 (73.08%), Query Frame = 0
Query:    1 LPTIVTQAVDAIIEHQGAAEQTEVSQWVADNELIVSKYADTLEHVDSGRRISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYEETGRK 104
            LP +V ++  +II H G A Q +++ W  D E+ +SKY + L  VD+G +IS DPK+W CE SG TEN+WLNLS G+IG GR+NWDGSGG+  AL HYEETG++
Sbjct:  103 LPEMVVKSAKSIIHHVGLAIQQDLTAWKDDEEIPISKYCNELPFVDNGVKISPDPKSWKCEKSGDTENIWLNLSDGFIGGGRKNWDGSGGSNGALDHYEETGQQ 206          
BLAST of mRNA_Ecto-sp13_S_contig12746.2275.1 vs. uniprot
Match: A0A2P6U3W2_CHLSO (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U3W2_CHLSO)

HSP 1 Score: 131 bits (329), Expect = 2.790e-33
Identity = 64/104 (61.54%), Postives = 76/104 (73.08%), Query Frame = 0
Query:    1 LPTIVTQAVDAIIEHQGAAEQTEVSQWVADNELIVSKYADTLEHVDSGRRISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYEETGRK 104
            LP +V   + A+ EH  AA+Q +V  W  + E  VSKYAD LE + + +RI  DPK W CEDSG  ENLWLNLSTGYIGSGR NWDG+GGTGAAL+HYE TG+K
Sbjct:  134 LPELVLGCIKAVQEHASAAQQEKVDAW--EEERRVSKYADGLEQLPATKRIPMDPKQWRCEDSGLQENLWLNLSTGYIGSGRANWDGTGGTGAALKHYEATGKK 235          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12746.2275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CMU5_9STRA1.480e-4373.08Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Trib... [more]
A0A7S2V2B3_9STRA3.660e-4063.11Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Fibroca... [more]
A0A7R9Y9N6_9STRA2.680e-3863.46Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ping... [more]
D8LDI4_ECTSI2.860e-3861.48Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ecto... [more]
A0A7R9VT46_9CHLO6.640e-3762.50Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Chlamyd... [more]
A0A2R5GGB5_9STRA7.600e-3665.71Ubiquitinyl hydrolase 1 n=1 Tax=Hondaea fermentalg... [more]
A0A7S1SZS2_9CHLO4.310e-3459.05Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tetr... [more]
A0A7R9TGP0_9VIRI1.090e-3361.54Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Pras... [more]
A0A448ZMX3_9STRA1.950e-3354.81UBP-type domain-containing protein n=1 Tax=Pseudo-... [more]
A0A2P6U3W2_CHLSO2.790e-3361.54Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Chlo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001607Zinc finger, UBP-typeSMARTSM00290Zf_UBP_1coord: 59..104
e-value: 0.0021
score: 27.3
IPR001607Zinc finger, UBP-typePFAMPF02148zf-UBPcoord: 60..102
e-value: 1.9E-5
score: 24.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 21..104
e-value: 9.0E-20
score: 72.7
NoneNo IPR availablePANTHERPTHR21646FAMILY NOT NAMEDcoord: 1..103
NoneNo IPR availablePANTHERPTHR21646:SF10coord: 1..103
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 35..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12746contigEcto-sp13_S_contig12746:629..2417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12746.2275.1mRNA_Ecto-sp13_S_contig12746.2275.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12746 629..2417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12746.2275.1 ID=prot_Ecto-sp13_S_contig12746.2275.1|Name=mRNA_Ecto-sp13_S_contig12746.2275.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp
LPTIVTQAVDAIIEHQGAAEQTEVSQWVADNELIVSKYADTLEHVDSGRR
ISSDPKTWVCEDSGKTENLWLNLSTGYIGSGRQNWDGSGGTGAALRHYEE
TGRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001607Znf_UBP
IPR013083Znf_RING/FYVE/PHD