prot_Ecto-sp13_S_contig12739.2268.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12739.2268.1
Unique Nameprot_Ecto-sp13_S_contig12739.2268.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length422
Homology
BLAST of mRNA_Ecto-sp13_S_contig12739.2268.1 vs. uniprot
Match: D7FN03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN03_ECTSI)

HSP 1 Score: 593 bits (1528), Expect = 1.070e-201
Identity = 382/422 (90.52%), Postives = 385/422 (91.23%), Query Frame = 0
Query:    1 MFASRRGNRFVFFAAMQAFIDRGEEGSRLLKEQLLAGSEDREKGSILESVAMAGWLSRGPQLQSAVLELLDSAWDELERSLDDRLLVSGARGVLRAALREGLLPGSCGFGQNTLEKLVLQVLTNLPVSARALHKRGIGGGRSNIFSRMNSFARXNSGASVVGAGXXXXXXXXXXXXXXXXXXXXXXXFVKGTSFNSXXXXXXXXXXXXXXXXXXXTNGTVTTGPHCGTVLLPGLGHEAGSYKAGDSRCGTVIFNARAKESLLVAEWVFEPESEAVGMRGAAFEGPLALALQMGWTELVCSPLVLDLLWAKLTAGVELDVHSWGANPTQWYTRLRRPSAGSAPAAAVTAATPVHNTAAXXXXXXXXXXXXXXXDATATRVEGMDPRRSSPGDLKNAAASWDITIAPSLQAVLVGVATGPDVFY 422
            MFASRRGNRFVFFAAMQAFIDRGEEGSRLLKEQLLAGSEDREKGSILESVAMAGWLSRGPQLQ AVLELLDSAWDELERSLDDRLLVSGARGVLRAALREGLLPGSCGFGQ TLEKLVLQVLTNLPVSARA +KRGIGGGRSNIFSRM     X  GAS+VGAGXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXTNG VT GPHCGTVLL GLG EAGS KAGDSR G VIFNARAKESLLVAEWVFEPESEAVGMRGAAFEGPLALALQMGWTELVCSPLVLDLLWAKLTAGVELDVHS GANP QWY RL  PSAGSAPA AVTAATPVHNTA XXXXXXXXXXXXXXX   ATRVEG+DPRRSSPG LKNAAASWDITIAPSLQAVLVGVATGPDVFY
Sbjct:   16 MFASRRGNRFVFFAAMQAFIDRGEEGSRLLKEQLLAGSEDREKGSILESVAMAGWLSRGPQLQPAVLELLDSAWDELERSLDDRLLVSGARGVLRAALREGLLPGSCGFGQKTLEKLVLQVLTNLPVSARAFNKRGIGGGRSNIFSRMXXXXXXXXGASMVGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNGMVTMGPHCGTVLLAGLGQEAGSGKAGDSRRGAVIFNARAKESLLVAEWVFEPESEAVGMRGAAFEGPLALALQMGWTELVCSPLVLDLLWAKLTAGVELDVHSCGANPAQWYARLPGPSAGSAPAPAVTAATPVHNTA-XXXXXXXXXXXXXXXXXXATRVEGVDPRRSSPGHLKNAAASWDITIAPSLQAVLVGVATGPDVFY 436          
BLAST of mRNA_Ecto-sp13_S_contig12739.2268.1 vs. uniprot
Match: A0A6H5L4C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C8_9PHAE)

HSP 1 Score: 491 bits (1263), Expect = 5.120e-156
Identity = 344/471 (73.04%), Postives = 356/471 (75.58%), Query Frame = 0
Query:   25 EGSRLLKEQLLAGSEDREKGSILESVAMAGWLSRGPQLQSAVLELLDSAWDELERSLDDRLLVSGARGVLRAALREGLLPG---------------------SCG----------------------------------------------FGQNTLEKLVLQVLTNLPVSARALHKRGIGGGRSNIFSRMNSFARXNSGASVVGAGXXXXXXXXXXXXXXXXXXXXXXXFVKGTSFNSXXXXXXXXXXXXXXXXXXXTNGTVTTGPHCGTVLLPGLGHEAGSYKAGDSRCGTVIFNARAKESLLVAEWVFEPESEAVGMRGAAFEGPLALALQMGWTELVCSPLVLDLLWAKLTAGVELDVHSWGANPTQWYTRLRRPS------AGSAPAAAVTAATPVHNTAAXXXXXXXXXXXXXXXDATATRVEGMDPRRSSPGDLKNAAASWDITIAPSLQAVLVGVATGPDVFY 422
            EGSRLLKEQLLAGSEDREKGSILESVAMAGWLSRGPQLQ AVLELLDSAWDELERS+DDRLLVS  +   + A+R+  L G                     SCG                                                QNTLEKLV+QVLTNLPVSARA +KRGIGGGRSNIFSRMNSFA  NSG+S+VGAGXXXXXXXXXXXXXXXXX      FVKG SFN XXXXXXXXXXXXXXXXXXXTNGTVTTGPHCGTVLLPGLG EAGS KAGDSRCGTVIFNARAKESLLVAEWVFEPESEAVGMRGAAFEGPLALALQMGWTELVCSPLVLDLLWAKLTAGVELDVHS GANP Q     R         A SAPA AVTAATPVHNTAAXXXXXXXXXXXXXXX ATATRVE MDP RSSPG+ K+AAASWDITIAPSLQAVLVGVA+ PDVFY
Sbjct:  715 EGSRLLKEQLLAGSEDREKGSILESVAMAGWLSRGPQLQPAVLELLDSAWDELERSVDDRLLVSAEQEAFQHAVRQRDLLGLSCVLSHGFRLSPVLIEGLVESCGPRCVRDCFLEAVASARNPLVPSLGLLSSVSTARKEASCPLHASWFLLMQNTLEKLVIQVLTNLPVSARAFNKRGIGGGRSNIFSRMNSFAPMNSGSSMVGAGXXXXXXXXXXXXXXXXXHRR---FVKGNSFNXXXXXXXXXXXXXXXXXXXXTNGTVTTGPHCGTVLLPGLGQEAGSGKAGDSRCGTVIFNARAKESLLVAEWVFEPESEAVGMRGAAFEGPLALALQMGWTELVCSPLVLDLLWAKLTAGVELDVHSCGANPAQVPVEKRAREGRRGMLARSAPAPAVTAATPVHNTAAXXXXXXXXXXXXXXXXATATRVERMDPARSSPGNSKHAAASWDITIAPSLQAVLVGVASRPDVFY 1182          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12739.2268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FN03_ECTSI1.070e-20190.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4C8_9PHAE5.120e-15673.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12739contigEcto-sp13_S_contig12739:2..4920 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12739.2268.1mRNA_Ecto-sp13_S_contig12739.2268.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12739 2..4950 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12739.2268.1 ID=prot_Ecto-sp13_S_contig12739.2268.1|Name=mRNA_Ecto-sp13_S_contig12739.2268.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=422bp
MFASRRGNRFVFFAAMQAFIDRGEEGSRLLKEQLLAGSEDREKGSILESV
AMAGWLSRGPQLQSAVLELLDSAWDELERSLDDRLLVSGARGVLRAALRE
GLLPGSCGFGQNTLEKLVLQVLTNLPVSARALHKRGIGGGRSNIFSRMNS
FARMNSGASVVGAGGGGGSGAGGSGGGGGGGNNRHRRFVKGTSFNSGNTT
SATTGAACSGGGGGGTNGTVTTGPHCGTVLLPGLGHEAGSYKAGDSRCGT
VIFNARAKESLLVAEWVFEPESEAVGMRGAAFEGPLALALQMGWTELVCS
PLVLDLLWAKLTAGVELDVHSWGANPTQWYTRLRRPSAGSAPAAAVTAAT
PVHNTAAAAAAAVAAAAAAAAADATATRVEGMDPRRSSPGDLKNAAASWD
ITIAPSLQAVLVGVATGPDVFY
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