mRNA_Ecto-sp13_S_contig12711.2248.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12711.2248.1 vs. uniprot
Match: A0A6H5JRV9_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV9_9PHAE) HSP 1 Score: 689 bits (1779), Expect = 8.150e-241 Identity = 349/371 (94.07%), Postives = 356/371 (95.96%), Query Frame = 1
Query: 1 GFTRVVGRMRAYTPVDADVGLRLMVRCTPMGAEGRRGRPVVRVLTSPVRPGRVPGPLALRRRWLEERGGGVYGGGGEGSTEIEGLGDGTEEGVREDAGRLLPEGAAAVGGTRKRRRRLRVMCYNILADMYCTSEQADKVLYPHCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRYLSPGLAFDGFEGIYANKAGQAQEGEAIFYRSSVLTLESRHDFSMKDAIPAQEDFRGLLEAFPTLSAIVGERLTTVAQVAVFRPASGCDGGGAAEFGGAGEEGSRVRVIVANTHLYFHPNAAHIRLMQLVTLVDRISRVRKDLLARGLKPAVVLGGDLNSPPGGPVGYLMGDLIGPDSHLWENVGTFKW 1113
GF+RVVGRMRAYTPVDADVGLRLMVRCTPMGAEGRRGRPVVRVLTSPVRPGR PGPLALRRRWLEER G VYGGGGEGS EIEGL DGTE GVRE GR+LP GAAAVGGTRKRRRRLRVMCYNILADMYCTSEQAD+VLYP+CPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRYLSPGLAFDGFEGIYANKAGQAQEGEAIFYRSSVLTLESRHDFSMKDAIP QEDFRGLL+AFPTLSAIV ERLTTVAQVAVFRPASGCD GGAAEFGGAGEEGSRVRVIVANTHLYFHPNAAHIRLMQLVTLV+RISRVRKDLLARGL+PAVVLGGDLNS PGGPV YLMGDLIGPDS LWENVGTFKW
Sbjct: 332 GFSRVVGRMRAYTPVDADVGLRLMVRCTPMGAEGRRGRPVVRVLTSPVRPGRAPGPLALRRRWLEEREGAVYGGGGEGSREIEGLADGTEGGVREGGGRVLPGGAAAVGGTRKRRRRLRVMCYNILADMYCTSEQADEVLYPYCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRYLSPGLAFDGFEGIYANKAGQAQEGEAIFYRSSVLTLESRHDFSMKDAIPGQEDFRGLLKAFPTLSAIVEERLTTVAQVAVFRPASGCDSGGAAEFGGAGEEGSRVRVIVANTHLYFHPNAAHIRLMQLVTLVERISRVRKDLLARGLRPAVVLGGDLNSTPGGPVRYLMGDLIGPDSDLWENVGTFKW 702
BLAST of mRNA_Ecto-sp13_S_contig12711.2248.1 vs. uniprot
Match: D7FYP3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP3_ECTSI) HSP 1 Score: 667 bits (1721), Expect = 4.630e-234 Identity = 341/375 (90.93%), Postives = 352/375 (93.87%), Query Frame = 1
Query: 1 GFTRVVGRMRAYTPVDADVGLRLMVRCTPMGAEGRRGRPVVRVLTSPVRPGRVPGPLALRRRWLEERGGGVYGGGGEGSTEIEGLGD-GTEEGVREDAGRLLPEGAAAVGGTRKRRRRLRVMCYNILADMYCTSEQADKVLYPHCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRYLSPGLAFDGFEGIYANKAGQAQEGEAIFYRSSVLTLESRHDFSMKDAIPAQEDFRGLLEAFPTLSAIVGERLTTVAQVAVFRPASGCDGGGAAEFG---GAGEEGSRVRVIVANTHLYFHPNAAHIRLMQLVTLVDRISRVRKDLLARGLKPAVVLGGDLNSPPGGPVGYLMGDLIGPDSHLWENVGTFKW 1113
GFTRVVGRMRAYTPVDADVGLRLMVRCTPMG EGRRGRPVVRVLTSPVRPGRVPGPLALRR WLEERGGGVYGGGGEGSTE EGL D GTE GVRE GR LP GAAAVGGT +RR RLRVMCYNILADMYCTSEQADKVLYP+CPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDR+LSPGLA DGFEGIYANKAGQAQEGEA+FYRSSVL LESRHDFSMKDAIPAQE+FRGLLEAFPTLSAIV +RLTTVAQVAVFRPASGCDGGG AE G GAGEEGSRVR+IVANTHLYFHPNAAHIRLMQLVTLV+RISRVRKDLLARGL+PAV+LGGDLNSPP GPV YLMGDLIGPDS LWEN+GTFKW
Sbjct: 158 GFTRVVGRMRAYTPVDADVGLRLMVRCTPMGLEGRRGRPVVRVLTSPVRPGRVPGPLALRRHWLEERGGGVYGGGGEGSTETEGLADDGTEGGVREGGGRALPGGAAAVGGTIRRRCRLRVMCYNILADMYCTSEQADKVLYPYCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRFLSPGLALDGFEGIYANKAGQAQEGEAVFYRSSVLALESRHDFSMKDAIPAQEEFRGLLEAFPTLSAIVEDRLTTVAQVAVFRPASGCDGGGMAEAGASGGAGEEGSRVRLIVANTHLYFHPNAAHIRLMQLVTLVERISRVRKDLLARGLRPAVILGGDLNSPPDGPVRYLMGDLIGPDSDLWENMGTFKW 532
BLAST of mRNA_Ecto-sp13_S_contig12711.2248.1 vs. uniprot
Match: A0A836CIF3_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIF3_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.050e-53 Identity = 103/242 (42.56%), Postives = 150/242 (61.98%), Query Frame = 1
Query: 388 YCTSEQADKVLYPHCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRYLSPGLAFDGFEGIYANKAGQAQEGEAIFYRSSVLTLESRHDFSMKDAIPAQEDFRGLLEAFPTLSAIVGERLTTVAQVAVFRPASGCDGGGAAEFGGAGEEGSRVRVIVANTHLYFHPNAAHIRLMQLVTLVDRISRVRKDLLARGLKPAVVLGGDLNSPPGGPVGYLMGDLIGPDSHLWENVGTFKW 1113
YCTS+ A VLYP+CP E+R + +R Q+V RE+ G++AD+I LQEC+ K F L P +G++G+Y K G EG A F+ +S L +ES HDF+M+D +P ++F+ L E P L I+ L+T+ Q+ V R GAG R+IVANTHL+FHPNAAHIRL+Q+V L++ + +R+ LL+ G + VV+ GD+NS P + YL GD + + +W +V F+W
Sbjct: 390 YCTSDFAANVLYPYCPAEWRDLGHRSQVVVRELLGYSADVICLQECDRKVFYGVLLPTFKANGYDGLYKCKCGAVPEGAATFWDASKLEMESSHDFNMRDVVPKLKEFQLLWEEVPHLLNILARNLSTIGQITVLRTK------------GAGGR----RIIVANTHLFFHPNAAHIRLIQMVALMNAVQGIRERLLSEGQEVGVVVCGDMNSTPLTAIRYLEGDTLSAEHAVWRHVRAFRW 615
BLAST of mRNA_Ecto-sp13_S_contig12711.2248.1 vs. uniprot
Match: A0A7M7STK6_STRPU (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7STK6_STRPU) HSP 1 Score: 155 bits (392), Expect = 1.040e-37 Identity = 118/399 (29.57%), Postives = 178/399 (44.61%), Query Frame = 1
Query: 16 VGRMRAYTPVDADVGLRLMVRCTPMGAEGRRGRPVVRVLTSPVRPGRVPGPLALRRRWLEERGGGVYGGGGEGSTEIEGLGDGTEEGVREDAGRLLPEGAAAVGGTRKRRRRLRVMCYNILADMYCTSEQADKVLYPHCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRYLSPGLAFDGFEGIYANKAGQAQEGEAIFYRSSVLTLESRHDFSMKDAIPAQEDFRGLLEAFPTLSAIVGERLT--TVAQVAVFRPASGCDGGGAAEFGGAGEEGSRVRVIVANTHLYFHPNAAHIRLMQLVTLVDRISRVRKDLLARG--LKPAVVLGGDLNSPPGGPVGYLMGDLIGPDSHLWENVGTFKW*A*VGWDGGGDVYGSGRLLRQLVKVWLGC 1200
VG+ + YTP DVG +L + CTP E + G V V+ G P R + + R P+ LR+ YNILADMY S+ + LYP+C +DYR Q++ +E+ G+ AD++ LQEC K ++ L P L G++G+ K Q EGEA+FYR L ++D S+ +A + L+EA A++ + LT +V QVAV R R+ VANTHLYFHP A HIRL+Q +T++ + ++++ L + +K A++L GDLNS P P + +L+ H+ EN +W + GG + + G L + C
Sbjct: 229 VGQRKTYTPTLTDVGSKLKLLCTPKNGE-KFGEGKECVTMRAVKCGPEVYPFQKRHEFTKNR--------------------------------TTPDC-------------LRIFSYNILADMYADSDFSRDYLYPYCSPVALDIDYREQLLLKEISGYNADILCLQECGKKLYEYSLKPALTDQGYKGLLICKTRQTPEGEALFYREDRFRLHEQYDISLAEAFQKESSNSDLVEAVSKSPAMLNQVLTRSSVLQVAVLEDC----------------HDPRRRICVANTHLYFHPRAGHIRLIQTITILRHLQKIQQQHLEKNPDIKLAMILCGDLNSAPTCPGVF---ELLSK-KHIPEN--NVQW-----YCGGKEEFCGGMTLSHSLDFTNAC 554
BLAST of mRNA_Ecto-sp13_S_contig12711.2248.1 vs. uniprot
Match: UPI0018D89EB2 (LOW QUALITY PROTEIN: 2',5'-phosphodiesterase 12-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D89EB2) HSP 1 Score: 155 bits (392), Expect = 1.260e-37 Identity = 101/256 (39.45%), Postives = 138/256 (53.91%), Query Frame = 1
Query: 355 RVMCYNILADMYCTSEQADKVLYPHCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRYLSPGLAFDGFEGIYANKAGQAQEGEAIFYRSSVLTLESRHDFSMKDAIPAQEDFRGLLEAFPTLSAIVGE--RLTTVAQVAVFRPASGCDGGGAAEFGGAGEEGSRVRVIVANTHLYFHPNAAHIRLMQLVTLVDRISRV----RKDLLARGLKPAVVLGGDLNSPPGGPV-GYLMGDLIGPDSHLWENVG 1101
RV+ YNILADMY S+ + VLYP+CPK+ +DYR Q++ +E+ G+ AD++ LQE K F+ L P L G +G+ K G EGEA+FYR+ L HD + +AI R +LEA A+ L + QVAV S + SR R+ VANTHLYFHP A+HIRL+Q + + RV ++D G++PAV+L GDLNS PGG V +L + +S W G
Sbjct: 318 RVVSYNILADMYADSDFSRDVLYPYCPKDVLDIDYREQLILKELTGYNADILCLQEVGRKLFECSLVPSLKTSGLDGLLRCKHGNMAEGEAVFYRTDKFRLLGSHDVAFCEAIEKDPLHRNILEAVVRSEAMFKRFLGLAAIVQVAVLELIS---------------DPSR-RLCVANTHLYFHPRASHIRLIQTAIVTQHVERVCSMYQQD---GGVRPAVLLCGDLNSTPGGCVYEFLTKGSVAENSVDWYTSG 554
BLAST of mRNA_Ecto-sp13_S_contig12711.2248.1 vs. uniprot
Match: A0A8B7ZEU9_ACAPL (2',5'-phosphodiesterase 12-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZEU9_ACAPL) HSP 1 Score: 153 bits (386), Expect = 7.880e-37 Identity = 98/254 (38.58%), Postives = 133/254 (52.36%), Query Frame = 1
Query: 355 RVMCYNILADMYCTSEQADKVLYPHCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRYLSPGLAFDGFEGIYANKAGQAQEGEAIFYRSSVLTLESRHDFSMKDAIPAQEDFRGLLEAFPTLSAIVGE--RLTTVAQVAVFRPASGCDGGGAAEFGGAGEEGSRVRVIVANTHLYFHPNAAHIRLMQLVTLVDRISRVRKDLLARG--LKPAVVLGGDLNSPPGGPV-GYLMGDLIGPDSHLWENVG 1101
RV+ YNILADMY S+ + VLYP+CPK+ +DYR Q++ +E+ G+ AD++ LQE K F+ + P L G +G+ K G EGEAIFYR+ L HD + + + R LLEA A++ L V QVAVF S R+ +ANTHLYFHP A+HIRL+Q + I +V + +KPAVVL GDLNS P G V +L+ + S W + G
Sbjct: 315 RVVSYNILADMYADSDFSRDVLYPYCPKDVLDIDYREQLLLKELTGYNADIMCLQEVGRKLFESSMEPSLKNSGLDGLLRCKHGNLAEGEAIFYRTDKFRLLGSHDVAFCEVLQKDPLHRNLLEAVARSDAMLKRFLGLAAVVQVAVFELISD----------------PSKRLCIANTHLYFHPRASHIRLIQTAMITQHIQKVCSVYQEQDNQVKPAVVLCGDLNSTPDGCVYEFLVKGSLSEKSVDWYSSG 552
BLAST of mRNA_Ecto-sp13_S_contig12711.2248.1 vs. uniprot
Match: UPI001BB16AA1 (2',5'-phosphodiesterase 12-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB16AA1) HSP 1 Score: 151 bits (382), Expect = 2.250e-36 Identity = 117/399 (29.32%), Postives = 177/399 (44.36%), Query Frame = 1
Query: 16 VGRMRAYTPVDADVGLRLMVRCTPMGAEGRRGRPVVRVLTSPVRPGRVPGPLALRRRWLEERGGGVYGGGGEGSTEIEGLGDGTEEGVREDAGRLLPEGAAAVGGTRKRRRRLRVMCYNILADMYCTSEQADKVLYPHCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRYLSPGLAFDGFEGIYANKAGQAQEGEAIFYRSSVLTLESRHDFSMKDAIPAQEDFRGLLEAFPTLSAIVGERLT--TVAQVAVFRPASGCDGGGAAEFGGAGEEGSRVRVIVANTHLYFHPNAAHIRLMQLVTLVDRISRVRKDLLARG--LKPAVVLGGDLNSPPGGPVGYLMGDLIGPDSHLWENVGTFKW*A*VGWDGGGDVYGSGRLLRQLVKVWLGC 1200
VG+ + YTP DVG +L + CTP E + G V V+ G P R + +++ P+ LR+ YNILADMY S+ + LYP+C +DYR Q++ +E+ G+ AD++ LQEC K F L P L G++G+ K Q EGEA+FY+ L +HD S+ +A + + L+EA A++ + +T +V QV V R R+ VANTHLYFHP A HIRL+Q +T++ + ++++ L + ++ A+V GDLNS P P Y +LI H+ EN +W + GG + + G L + C
Sbjct: 222 VGQQKTYTPTSLDVGSKLKIICTPKNGE-KVGEEKECVTMRAVKCGPEVYPFQKRHEFTKDK--------------------------------TSPDC-------------LRIFSYNILADMYADSDFSRDYLYPYCSTIALDIDYREQLLLKELSGYNADILCLQECGKKLFQYSLEPALNDQGYKGLLICKTRQTPEGEALFYKEDRFRLIDQHDISLAEAFQEEPSNKDLVEAVSKSKAMLNQVITRSSVLQVTVLEDI----------------HYPRRRICVANTHLYFHPRAGHIRLIQTITILRHLHKIQQQHLEKNPDIELAMVFCGDLNSSPTCPGVY---ELISK-KHIPEN--HVQW-----YCGGKEEFCGGMTLTHSLDFTNAC 547
BLAST of mRNA_Ecto-sp13_S_contig12711.2248.1 vs. uniprot
Match: A0A2T7Q136_POMCA (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7Q136_POMCA) HSP 1 Score: 150 bits (379), Expect = 3.730e-36 Identity = 119/395 (30.13%), Postives = 167/395 (42.28%), Query Frame = 1
Query: 34 YTPVDADVGLRLMVRCTPMGAEGRRGRPVVRVLTSPVRPGRVPGPLALRRRWLEERGGGVYGGGGEGSTEIEGLGDGTEEGVREDAGRLLPEGAAAVGGTRKRRRRLRVMCYNILADMYCTSEQADKVLYPHCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRYLSPGLAFDGFEGIYANKAGQAQEGEAIFYRSSVLTLESRHDFSMKDAIPAQ---EDFRGLLEAFPTLSAIVGERLTTVAQVAVFRPASGCDGGGAAEFGGAGEEGSRVRVIVANTHLYFHPNAAHIRLMQLVTLVDRISRVRKDLLARGLKPAVVLGGDLNSPPGGPVGYLMGDLIGPDSHLWENVGTFKW*A*VGWDGGGDVYGSGRLLRQLVKVWLGCGCV 1209
YTP D+G RL + C P G GRRGR V++ VRPG P P R+ + R TE+G RV+ YNILA+ Y +E A VL+ +CP MDYR Q++ +E+ G+ AD++ LQE + K F+ L P L GF G K Q EG A F RS + S+HD + D + D R +E P L A + +R V Q V + + +IVANTH YFHP A H+RL+Q T + + + + +G + ++V GD NS P V L+ P+ + N DGG + G L+ +K+ CG V
Sbjct: 190 YTPDAGDIGCRLKLTCVP-GRTGRRGREDC-VVSDEVRPGPGPCPFEARQEYTSHR---------------------TEDGT------------------------FRVVSYNILAETYSDTEYARDVLFSYCPPYALEMDYRRQLLLKEITGYNADVVCLQEVDRKVFENELLPSLDMLGFTGALKIKGQQGNEGVATFIRSDKFRIISQHDVLLTDMLMNSACCSDLREAVEKLPKLKAKIEDR-GNVLQAMVLETV----------------QSPQRLLIVANTHFYFHPEAGHLRLLQAATSLRHLQSICELFEQQGREISLVFCGDFNSTPHHGVNALITTGYIPEDYADWN------------DGGDEERIQGLQLQHRLKLSSACGYV 508
BLAST of mRNA_Ecto-sp13_S_contig12711.2248.1 vs. uniprot
Match: UPI0014555891 (2',5'-phosphodiesterase 12-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014555891) HSP 1 Score: 151 bits (381), Expect = 3.970e-36 Identity = 97/254 (38.19%), Postives = 138/254 (54.33%), Query Frame = 1
Query: 355 RVMCYNILADMYCTSEQADKVLYPHCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRYLSPGLAFDGFEGIYANKAGQAQEGEAIFYRSSVLTLESRHDFSMKDAIPAQEDFRGLLEAFPTLSAIVGE--RLTTVAQVAVFRPASGCDGGGAAEFGGAGEEGSRVRVIVANTHLYFHPNAAHIRLMQLVTLVDRISRVRK--DLLARGLKPAVVLGGDLNSPPG-GPVGYLMGDLIGPDSHLWENVG 1101
RV+ YN+LADMY S+ + LYP+CPK+ +DYR Q++ +E+ G AD++ LQE K+F+ L P L G +G+ K G EGEAIFYR+ L +D + + + + + LLE A++ + L + QVAV S + SR R+ VANTHLYFHP AAH+RL+Q LV+ + +V + + G++PA+VL GDLNS P G YL I DS W + G
Sbjct: 319 RVVSYNVLADMYADSDYSRDFLYPYCPKDALEIDYREQVLLKELSGFNADILCLQEVGKKSFESVLLPCLRMSGLDGMLCCKHGNVPEGEAIFYRTDKFRLLGSYDVAFCEELVKEPRQQSLLEVVVQSKAMLKKFLGLAAIVQVAVLELIS---------------DPSR-RLCVANTHLYFHPRAAHLRLIQTAILVEHLEKVCSMYNNESDGVRPAIVLMGDLNSSPSSGVYHYLTKGSIKKDSVEWYSNG 556
BLAST of mRNA_Ecto-sp13_S_contig12711.2248.1 vs. uniprot
Match: A0A7K8ND98_CASCA (PDE12 phosphodiesterase (Fragment) n=2 Tax=Casuariiformes TaxID=8784 RepID=A0A7K8ND98_CASCA) HSP 1 Score: 148 bits (373), Expect = 2.980e-35 Identity = 118/362 (32.60%), Postives = 166/362 (45.86%), Query Frame = 1
Query: 28 RAYTPVDADVGLRLMVRCTPMGAEGRRGRPVVRVLTSPVRPGRVPGPLALRRRWLEERGGGVYGGGGEGSTEIEGLGDGTEEGVREDAGRLLPEGAAAVGGTRKRRRRLRVMCYNILADMYCTSEQADKVLYPHCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRYLSPGLAFDGFEGIYANKAGQAQEGEAIFYRSSVLTLESRHDFSMKDAI---PAQEDFRGLLEAFPTLSAIVGERLTTVAQVAVFRPASGCDGGGAAEFGGAGEEGSRVRVIVANTHLYFHPNAAHIRLMQLVTLVDRISRVRKDLLARGLKPAVVLGGDLNSPPG-GPVGYLMGDLIGPDSHLWENVG 1101
R +TP +A VGLRL +RCTP R G P + PV G PG R L G V GGG RLR + YNILAD+Y +E + VLYP+C +DYR ++ +E+ G++ADL+ LQE + F L+P L G EG++ K Q EG A FYR L+L SRHD + +A+ P E+ R L A+P + V +R ++V QV+V + A+ + SR ++ VANTHLY+HP +IRL+Q+ + I + DL ++ GD NS P G ++ I D W + G
Sbjct: 210 RVFTPSNALVGLRLKLRCTPGDGAQRYGPPREVESSGPVEAG--PGACTFDARHLYT--GKVCGGG-----------------------------------------RLRAVSYNILADVYAQTEFSRTVLYPYCAPYALELDYRQNLLQKELAGYSADLVCLQEVDKSVFADSLAPALDAFGLEGLFKIKEKQ-HEGLATFYRRDKLSLLSRHDIAFSEALLSDPLHEELRARLAAYPLVQEKVLQR-SSVLQVSVLQSAT---------------DPSR-KICVANTHLYWHPKGGNIRLIQIAIALSHIKHIACDLYP---SIPIIFCGDFNSTPSSGTYSFINSGSIAEDHEDWVSNG 505 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12711.2248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12711.2248.1 >prot_Ecto-sp13_S_contig12711.2248.1 ID=prot_Ecto-sp13_S_contig12711.2248.1|Name=mRNA_Ecto-sp13_S_contig12711.2248.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=364bp MRAYTPVDADVGLRLMVRCTPMGAEGRRGRPVVRVLTSPVRPGRVPGPLAback to top mRNA from alignment at Ecto-sp13_S_contig12711:2..4528- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12711.2248.1 ID=mRNA_Ecto-sp13_S_contig12711.2248.1|Name=mRNA_Ecto-sp13_S_contig12711.2248.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4527bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12711:2..4528- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12711:2..4528- >mRNA_Ecto-sp13_S_contig12711.2248.1 ID=mRNA_Ecto-sp13_S_contig12711.2248.1|Name=mRNA_Ecto-sp13_S_contig12711.2248.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1092bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12711:2..4528- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |