prot_Ecto-sp13_S_contig1263.2180.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1263.2180.1
Unique Nameprot_Ecto-sp13_S_contig1263.2180.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length173
Homology
BLAST of mRNA_Ecto-sp13_S_contig1263.2180.1 vs. uniprot
Match: A0A2I6RJN1_SACJA (GDP-L-fucose synthase n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A2I6RJN1_SACJA)

HSP 1 Score: 348 bits (894), Expect = 3.140e-119
Identity = 164/172 (95.35%), Postives = 169/172 (98.26%), Query Frame = 0
Query:    1 IDVLNRCYKGEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 172
            IDVLNRCYK EYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAM+FEGNVVFDTDKSDGQFKKTACNDLLK+KNPDFKFT M++GLK AC+WFCENYETARK
Sbjct:  156 IDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMDFEGNVVFDTDKSDGQFKKTACNDLLKQKNPDFKFTPMKEGLKQACEWFCENYETARK 327          
BLAST of mRNA_Ecto-sp13_S_contig1263.2180.1 vs. uniprot
Match: A0A7S3H4T7_9STRA (GDP-L-fucose synthase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4T7_9STRA)

HSP 1 Score: 262 bits (670), Expect = 2.790e-85
Identity = 119/172 (69.19%), Postives = 140/172 (81.40%), Query Frame = 0
Query:    1 IDVLNRCYKGEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 172
            IDV+N+CY  EYGCN+TS+IPTNIYG  DNF I++GHV+PGLIHKCYKAK+ G DL +WGTGSPLRQFIY+ DL  L +W MR YH  +PIILSVGEEDEVSIAD A+ +A AM FEGN+VFDT KSDGQ+KKTA N  L++  PDF+FT +  GL+ ACDWF  NYETARK
Sbjct:  148 IDVVNKCYNEEYGCNYTSIIPTNIYGPHDNFGIEDGHVIPGLIHKCYKAKRDGTDLTIWGTGSPLRQFIYSEDLARLTVWVMREYHSPEPIILSVGEEDEVSIADVARAVAKAMKFEGNIVFDTTKSDGQYKKTASNKKLRELYPDFEFTPIDQGLQQACDWFVANYETARK 319          
BLAST of mRNA_Ecto-sp13_S_contig1263.2180.1 vs. uniprot
Match: A0A6H5JCJ7_9PHAE (GFS protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCJ7_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 2.930e-85
Identity = 125/128 (97.66%), Postives = 125/128 (97.66%), Query Frame = 0
Query:    1 IDVLNRCYK--GEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDK 126
            IDVLNRCYK   EYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDK
Sbjct:   87 IDVLNRCYKVPDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDK 214          
BLAST of mRNA_Ecto-sp13_S_contig1263.2180.1 vs. uniprot
Match: A0A836C923_9STRA (GDP-L-fucose synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C923_9STRA)

HSP 1 Score: 253 bits (647), Expect = 7.080e-82
Identity = 119/171 (69.59%), Postives = 135/171 (78.95%), Query Frame = 0
Query:    1 IDVLNRCYKGEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETAR 171
            IDV+NRCY+ EYGCNFTSVIPTNIYGK DNFSID GHV+PGLIHKC+ A++ G    +WG+GSPLRQFIYNVDLGALM+W +R+Y  VDPIILSVGEEDEVSIADAA+M+A  M + G VVFDT K+DGQFKKTA N  L+   PDFKFT M  GL   C WF  N   AR
Sbjct:  141 IDVMNRCYRDEYGCNFTSVIPTNIYGKHDNFSIDGGHVIPGLIHKCFLAEKNGTPFTIWGSGSPLRQFIYNVDLGALMVWVLRSYDSVDPIILSVGEEDEVSIADAARMVAKGMAYSGEVVFDTTKADGQFKKTASNARLRALRPDFKFTPMAQGLAETCAWFKANSAVAR 311          
BLAST of mRNA_Ecto-sp13_S_contig1263.2180.1 vs. uniprot
Match: B8CFU3_THAPS (GDP-L-fucose synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFU3_THAPS)

HSP 1 Score: 251 bits (640), Expect = 1.040e-80
Identity = 114/172 (66.28%), Postives = 135/172 (78.49%), Query Frame = 0
Query:    1 IDVLNRCYKGEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 172
            ID +NR Y  EYGCNFTS+IPTNIYG  DNFSI+NGHV+PGLIHKCYKAK+ G D  +WG+G+PLRQFIY+ DL  L +W MR+YH  DPI LSV E  EV+I D A  +A AM FEG VVFDT K+DGQFKKTACN  L+   PD++FTSM+DG++ + DWF ENYETARK
Sbjct:  153 IDTMNRAYAEEYGCNFTSIIPTNIYGPNDNFSIENGHVIPGLIHKCYKAKKDGTDFTIWGSGTPLRQFIYSGDLAELTVWVMRDYHSPDPITLSVDESAEVAIKDVAYAVAKAMKFEGKVVFDTSKADGQFKKTACNKKLRGLRPDYQFTSMEDGIQKSVDWFLENYETARK 324          
BLAST of mRNA_Ecto-sp13_S_contig1263.2180.1 vs. uniprot
Match: F0YA35_AURAN (GDP-L-fucose synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA35_AURAN)

HSP 1 Score: 249 bits (635), Expect = 5.280e-80
Identity = 116/172 (67.44%), Postives = 135/172 (78.49%), Query Frame = 0
Query:    1 IDVLNRCYKGEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 172
            I+V+NRCY  EYGC FT+VIPTNIYG  DNFS++ GHV+PGLIHKCY AK+ G    VWG+G+PLRQFIY+VDL AL +W MR+Y   D IILSVGEEDEVSI D A MI  AM FEG V+FDTDK+DGQ+KKTA ND LK   PDFKFT M++GL+ A DWF  NY+T RK
Sbjct:  149 IEVMNRCYAEEYGCKFTAVIPTNIYGPHDNFSVNGGHVVPGLIHKCYVAKRDGTPFTVWGSGTPLRQFIYSVDLAALTVWVMRSYDSADSIILSVGEEDEVSIKDVALMIRDAMKFEGEVIFDTDKADGQYKKTASNDKLKGLRPDFKFTPMREGLQKAVDWFVANYDTCRK 320          
BLAST of mRNA_Ecto-sp13_S_contig1263.2180.1 vs. uniprot
Match: A0A7S4EAF3_9STRA (GDP-L-fucose synthase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAF3_9STRA)

HSP 1 Score: 248 bits (633), Expect = 1.090e-79
Identity = 117/172 (68.02%), Postives = 132/172 (76.74%), Query Frame = 0
Query:    1 IDVLNRCYKGEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 172
            IDV+NRCYK EYGCNFTSVIPTNIYG  DN+SI  GHV+PGLIHKCY AK+ G    VWGTGSPLRQFIY+ DL AL +W +R+Y   DPIILSV EE EV+I D A MI  AM F+G V F TDK+DGQ+KKTA N+ L    PDF+FT M +GLK ACDWFC NYET RK
Sbjct:  150 IDVMNRCYKDEYGCNFTSVIPTNIYGPHDNYSIQGGHVVPGLIHKCYLAKKNGTPFEVWGTGSPLRQFIYSGDLAALTVWVLRSYDSTDPIILSVPEEKEVTIKDVALMIRDAMEFKGEVKFLTDKADGQYKKTASNEKLAGLRPDFQFTPMAEGLKKACDWFCANYETCRK 321          
BLAST of mRNA_Ecto-sp13_S_contig1263.2180.1 vs. uniprot
Match: A0A7S0PWT1_9STRA (GDP-L-fucose synthase n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PWT1_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.190e-78
Identity = 111/172 (64.53%), Postives = 132/172 (76.74%), Query Frame = 0
Query:    1 IDVLNRCYKGEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 172
            ID LNR Y  EY CNFTS+IPTNIYG  DNFSI NGHV+PGLIHKCY AK+      +WG+G+PLRQFIY++DL  L +WTMR YH  DPI LSV E DEV I D A  +A AM FEG +VFDTDK+DGQFKKTA N  L+K  PD+KFT++++G++ + DWF ENYETARK
Sbjct:   82 IDTLNRAYAEEYNCNFTSIIPTNIYGPHDNFSIQNGHVIPGLIHKCYLAKKNNTPFTIWGSGTPLRQFIYSLDLAELTVWTMREYHSPDPITLSVDEADEVPIKDVALAVAKAMKFEGEIVFDTDKADGQFKKTAANGKLRKYRPDYKFTTIEEGVQKSVDWFLENYETARK 253          
BLAST of mRNA_Ecto-sp13_S_contig1263.2180.1 vs. uniprot
Match: A0A7S0L5V8_9EUKA (GDP-L-fucose synthase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L5V8_9EUKA)

HSP 1 Score: 246 bits (627), Expect = 1.320e-78
Identity = 116/172 (67.44%), Postives = 134/172 (77.91%), Query Frame = 0
Query:    1 IDVLNRCYKGEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 172
            IDVLNRCY  +YGCNFTSV+PTNIYG  DNFSI +GHVLPGL+HKC+ A + G D  VWGTGSPLRQFI+N DLGALMIWTMR+Y   +PIILSVGEEDEVSI +AA  +A  M ++G VVFDT KSDGQ KKTA N  L   NPDFKFT  ++ + + C W  +NYETARK
Sbjct:  163 IDVLNRCYNEQYGCNFTSVVPTNIYGPHDNFSIQDGHVLPGLMHKCFLAMRDGGDFTVWGTGSPLRQFIFNEDLGALMIWTMRSYDSAEPIILSVGEEDEVSIKEAALAVAEGMGYKGEVVFDTTKSDGQHKKTASNAKLLGLNPDFKFTPFREAVASTCQWLKDNYETARK 334          
BLAST of mRNA_Ecto-sp13_S_contig1263.2180.1 vs. uniprot
Match: W7TZW1_9STRA (GDP-L-fucose synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZW1_9STRA)

HSP 1 Score: 253 bits (647), Expect = 1.370e-78
Identity = 114/172 (66.28%), Postives = 139/172 (80.81%), Query Frame = 0
Query:    1 IDVLNRCYKGEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 172
            +DV++RCYK EYGCNFTS+IPTNIYG  DNF+I +GHV+PGL+HKCY A+QAG D  +WG+G PLRQFIY+ DL  L+IWTMR YH  DP+ILSVGEEDEVSI   A+ +A AM F+GNVVFDT K+DGQ+KKTA N  L+   PDF+FTS+++GL+  C WF ENY TARK
Sbjct:  425 LDVMSRCYKEEYGCNFTSIIPTNIYGPHDNFNIQDGHVIPGLVHKCYLAEQAGTDFTIWGSGKPLRQFIYSRDLAELIIWTMREYHSADPLILSVGEEDEVSIGTLAETVAKAMEFKGNVVFDTSKADGQYKKTASNLKLRSLRPDFRFTSIEEGLEKTCAWFKENYATARK 596          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1263.2180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I6RJN1_SACJA3.140e-11995.35GDP-L-fucose synthase n=3 Tax=Phaeophyceae TaxID=2... [more]
A0A7S3H4T7_9STRA2.790e-8569.19GDP-L-fucose synthase n=2 Tax=Spumella elongata Ta... [more]
A0A6H5JCJ7_9PHAE2.930e-8597.66GFS protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836C923_9STRA7.080e-8269.59GDP-L-fucose synthase n=1 Tax=Tribonema minus TaxI... [more]
B8CFU3_THAPS1.040e-8066.28GDP-L-fucose synthase n=1 Tax=Thalassiosira pseudo... [more]
F0YA35_AURAN5.280e-8067.44GDP-L-fucose synthase n=1 Tax=Aureococcus anophage... [more]
A0A7S4EAF3_9STRA1.090e-7968.02GDP-L-fucose synthase n=2 Tax=Pelagomonas calceola... [more]
A0A7S0PWT1_9STRA1.190e-7864.53GDP-L-fucose synthase n=1 Tax=Asterionellopsis gla... [more]
A0A7S0L5V8_9EUKA1.320e-7867.44GDP-L-fucose synthase n=1 Tax=Coccolithus braarudi... [more]
W7TZW1_9STRA1.370e-7866.28GDP-L-fucose synthase n=2 Tax=Monodopsidaceae TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001509NAD-dependent epimerase/dehydratasePFAMPF01370Epimerasecoord: 4..95
e-value: 2.3E-16
score: 60.0
NoneNo IPR availableGENE3D3.90.25.10coord: 26..90
e-value: 1.8E-20
score: 75.1
NoneNo IPR availableGENE3D3.90.25.10coord: 91..172
e-value: 2.5E-11
score: 45.5
NoneNo IPR availablePANTHERPTHR43238FAMILY NOT NAMEDcoord: 1..172
NoneNo IPR availablePANTHERPTHR43238:SF1GDP-L-FUCOSE SYNTHASEcoord: 1..172
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 4..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1263contigEcto-sp13_S_contig1263:14500..18163 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1263.2180.1mRNA_Ecto-sp13_S_contig1263.2180.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1263 14500..18163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1263.2180.1 ID=prot_Ecto-sp13_S_contig1263.2180.1|Name=mRNA_Ecto-sp13_S_contig1263.2180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=173bp
IDVLNRCYKGEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAK
QAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDE
VSIADAAKMIASAMNFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFT
SMQDGLKAACDWFCENYETARK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR036291NAD(P)-bd_dom_sf