prot_Ecto-sp13_S_contig12622.2170.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig12622.2170.1
Unique Name	prot_Ecto-sp13_S_contig12622.2170.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	184

Homology

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BLAST of mRNA_Ecto-sp13_S_contig12622.2170.1 vs. uniprot
Match: A0A6H5LD75_9PHAE (GDP-mannose 4,6-dehydratase n=6 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5LD75_9PHAE)

HSP 1 Score: 373 bits (957), Expect = 4.230e-128
Identity = 177/180 (98.33%), Postives = 180/180 (100.00%), Query Frame = 0

Query:    4 QAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGTEITWVGEGVEEYGHAKGDPENVLVKVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFTELVKDMMKADIAHVDAGNEHL 183
            +AYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYLGNLDAKRDWGHA+DYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGTEITWVGEGVEEYGHAKGDPENVLVKVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFTELVKDMMKADIA+VDAGNEHL
Sbjct:  183 EAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYLGNLDAKRDWGHAKDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGTEITWVGEGVEEYGHAKGDPENVLVKVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFTELVKDMMKADIAYVDAGNEHL 362

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BLAST of mRNA_Ecto-sp13_S_contig12622.2170.1 vs. uniprot
Match: A0A4D9D4U1_9STRA (GDP-mannose 4,6-dehydratase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4U1_9STRA)

HSP 1 Score: 269 bits (688), Expect = 5.970e-87
Identity = 125/179 (69.83%), Postives = 152/179 (84.92%), Query Frame = 0

Query:    4 QAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGTEITWVGE--GVEEYGHAKGDPENVLVKVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFTELVKDMMKADIAHVDAGN 180
            +AY M L NGILFNHESPRRGPTFVTRKITRAVARI +G QKT+YLGNLDAKRDWGHARDY++GMW+M+Q D P D+VL+TGE H V+EFVE++F++VG E+ W GE   V E G+ K DPE+VLVK+DP+YFRPTEVELLLGD  KAKK +GW PE+SF +LVK+M++ADIA V+ G+
Sbjct:  206 EAYDMFLVNGILFNHESPRRGPTFVTRKITRAVARIQKGLQKTLYLGNLDAKRDWGHARDYVRGMWMMLQHDTPDDFVLATGETHPVREFVEKAFRHVGMEVEWKGEKGSVHEVGYNKADPEHVLVKIDPQYFRPTEVELLLGDPAKAKKHIGWEPEVSFDDLVKEMVEADIALVEKGD 384

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BLAST of mRNA_Ecto-sp13_S_contig12622.2170.1 vs. uniprot
Match: A0A8J2SRK3_9STRA (GDP-mannose 4,6-dehydratase n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRK3_9STRA)

HSP 1 Score: 268 bits (684), Expect = 5.170e-86
Identity = 126/175 (72.00%), Postives = 146/175 (83.43%), Query Frame = 0

Query:    4 QAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGTEITWVGEG--VEEYGHAKGDPENVLVKVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFTELVKDMMKADIAHV 176
            +AYGMHLTNGILFNHESPRRGPTFVTRKITRAVARI +GK KT+YLGNLDAKRDWGHARDY++GMWLMVQRDEP DYVLSTGECHSVKEF E +F  VG  + W G    V+E G    DP  VLVKVDP+YFRPTEV+LL+GDC+KAKK LGW P+++F  L ++M+ AD+A +
Sbjct:  230 EAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARISQGKMKTLYLGNLDAKRDWGHARDYVEGMWLMVQRDEPDDYVLSTGECHSVKEFCEVAFARVGITVQWKGAAGSVDEIGVDATDPSRVLVKVDPKYFRPTEVDLLVGDCSKAKKLLGWAPKVTFKALAEEMVDADLAEL 404

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BLAST of mRNA_Ecto-sp13_S_contig12622.2170.1 vs. uniprot
Match: K0T9K6_THAOC (GDP-mannose 4,6-dehydratase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T9K6_THAOC)

HSP 1 Score: 256 bits (653), Expect = 1.470e-83
Identity = 125/175 (71.43%), Postives = 143/175 (81.71%), Query Frame = 0

Query:    4 QAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGTEITWVGEG--VEEYGHAKGDPENVLVKVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFTELVKDMMKADIAHV 176
            +AYGMHLTNGILFNHESPRRG TFVTRKIT AVARI +G +KT+YLGN+DAKRDWGHARDY+KGMW+M+Q D P DYVL+TGE H+V+EFVE++F  VGT I W GE   V+E G    D   VLVK+DPRYFRPTEVELLLGD +KAKK LGW  E+ F  LVKDMMKAD+A V
Sbjct:   61 EAYGMHLTNGILFNHESPRRGATFVTRKITIAVARISQGLEKTLYLGNIDAKRDWGHARDYVKGMWMMLQHDVPDDYVLATGETHTVREFVEKAFAEVGTTIKWKGETGTVDEIGVDADDESRVLVKIDPRYFRPTEVELLLGDPSKAKKTLGWEAELGFEGLVKDMMKADLAMV 235

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BLAST of mRNA_Ecto-sp13_S_contig12622.2170.1 vs. uniprot
Match: A0A835Z0Z6_9STRA (GDP-mannose 4,6-dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Z6_9STRA)

HSP 1 Score: 258 bits (659), Expect = 7.040e-83
Identity = 121/178 (67.98%), Postives = 146/178 (82.02%), Query Frame = 0

Query:    4 QAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGTEITWVGE--GVEEYGHAKGDPENVLVKVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFTELVKDMMKADIAHVDAG 179
            +AYGM L+NGILFNHESPRRGPTFVTRKITRAV RIHR +Q+ +YLGNL+++RDWGHARDY++GMW+M+Q+D P D+VL+TGE HSVKEFVE SF YVGT + W GE   V+E+G    D   VLVKVDP YFRPTEV+LL+G   KAK+ LGW P+I+F  LV+DMMKAD+A VD G
Sbjct:  180 EAYGMFLSNGILFNHESPRRGPTFVTRKITRAVCRIHRQRQECLYLGNLESQRDWGHARDYVEGMWMMLQQDTPDDFVLATGEMHSVKEFVEASFAYVGTTVAWKGERGSVDEHGVDAADESRVLVKVDPSYFRPTEVDLLIGSPAKAKRVLGWSPKITFKALVEDMMKADLAEVDTG 357

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BLAST of mRNA_Ecto-sp13_S_contig12622.2170.1 vs. uniprot
Match: F0YLN7_AURAN (GDP-mannose 4,6-dehydratase n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLN7_AURAN)

HSP 1 Score: 256 bits (655), Expect = 3.390e-82
Identity = 120/177 (67.80%), Postives = 146/177 (82.49%), Query Frame = 0

Query:    4 QAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGTEITWVGEG--VEEYGHAKGDPENVLVKVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFTELVKDMMKADIAHVDA 178
            +AYGMHLTNGILFNHESPRRGPTFVTRKITRAV RI   +QKT+YLGNLDAKRDWGHARDY++GMWLMVQRD P DYVL+TGECHSV+EFVE SF++VG ++ W GE    EE G    D  + LVKVDP+Y+RPTEV+LL+GD  KA+++LGW P+I+F +L  +M+ AD+A + A
Sbjct:  186 EAYGMHLTNGILFNHESPRRGPTFVTRKITRAVVRIKAQQQKTLYLGNLDAKRDWGHARDYVEGMWLMVQRDVPDDYVLATGECHSVREFVEVSFEHVGIKVKWTGEPGTAEEVGVDAADESHELVKVDPKYYRPTEVDLLVGDAAKARRDLGWKPKITFKKLATEMVDADMAELKA 362

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BLAST of mRNA_Ecto-sp13_S_contig12622.2170.1 vs. uniprot
Match: A0A482T0S9_9ARCH (GDP-mannose 4,6-dehydratase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T0S9_9ARCH)

HSP 1 Score: 252 bits (643), Expect = 6.950e-82
Identity = 119/181 (65.75%), Postives = 145/181 (80.11%), Query Frame = 0

Query:    4 QAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGTEITWVGEG--VEEYGHAKGDPENVLVKVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFTELVKDMMKADIAHVDAGNEH 182
            +AYGMH TNGILFNHESPRRGPTFVTRKITRAVA+IHRG QKT+YLGNLDAKRDWGHA+DY++GMW M+Q ++  DYVL+T E HSV+EF+E++F ++GTEI W+GE   V+E G    D   VLVKVDPRYFRPTEV++L+G+  KA K LGW P   F +LVK+M+ ADIA +D    H
Sbjct:   76 EAYGMHATNGILFNHESPRRGPTFVTRKITRAVAKIHRGLQKTLYLGNLDAKRDWGHAKDYVEGMWRMLQTEQGDDYVLATNETHSVREFIEKAFGHIGTEIKWIGERGTVDETGVDAKDESRVLVKVDPRYFRPTEVDILIGNPAKATKALGWKPTTLFGDLVKEMVDADIAALDNPGSH 256

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BLAST of mRNA_Ecto-sp13_S_contig12622.2170.1 vs. uniprot
Match: A0A7S2XZ47_9STRA (GDP-mannose 4,6-dehydratase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ47_9STRA)

HSP 1 Score: 252 bits (643), Expect = 2.480e-80
Identity = 114/178 (64.04%), Postives = 147/178 (82.58%), Query Frame = 0

Query:    4 QAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYLGNLDAKRDWGHARDYIKGMWLMVQRD-EPSDYVLSTGECHSVKEFVEESFKYVGTEITWVGEGVEEYGHAKGDPENVLVKVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFTELVKDMMKADIAHVDAGN 180
            +AY MH  NGILFNHESPRRGPTFVTRK+TRAVARIH+G Q+ + LGNLD++RDWGHARDY++GMW+M+QRD E  DYVL+TGECHSV+EFVE++F Y+G  + W G GV+E G    + + VLVK++PRYFRPTEV+LL+GD +KAK  LGW P+++F  LV++MM+ADI  V+ G+
Sbjct:  193 EAYNMHCINGILFNHESPRRGPTFVTRKVTRAVARIHKGLQQDLQLGNLDSQRDWGHARDYVEGMWMMMQRDGEAEDYVLATGECHSVREFVEKAFHYIGITLGWRGSGVDEVGFDSANEDRVLVKINPRYFRPTEVDLLVGDASKAKNLLGWSPKVTFQALVEEMMQADIDKVEKGD 370

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BLAST of mRNA_Ecto-sp13_S_contig12622.2170.1 vs. uniprot
Match: A0A7S2GBW7_9STRA (GDP-mannose 4,6-dehydratase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GBW7_9STRA)

HSP 1 Score: 249 bits (635), Expect = 5.530e-79
Identity = 118/179 (65.92%), Postives = 144/179 (80.45%), Query Frame = 0

Query:    4 QAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGTEITWVGE--GVEEYGHAKGDPENVLVKVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFTELVKDMMKADIAHVDAGN 180
            +AYGMHLTNGILFNHESPRRGPTFVTRKITRAV RI +G Q  ++LGN+D++RDWGHARDY+KGMWLMVQRDEP D+VL+T ECHSV+EFVE++F+ V  +I W GE   V+E G    D    LVK+D +YFRPTEV+LL+GD  KAKK LGW PEI+F  LV +MM+ D+  V+AG+
Sbjct:  203 EAYGMHLTNGILFNHESPRRGPTFVTRKITRAVCRISKGLQDILFLGNIDSQRDWGHARDYVKGMWLMVQRDEPEDFVLATNECHSVREFVEKAFEAVDMKIKWTGEKGSVDEVGVDASDESRALVKIDLQYFRPTEVDLLIGDPAKAKKLLGWEPEITFDGLVTEMMEEDMKLVEAGD 381

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BLAST of mRNA_Ecto-sp13_S_contig12622.2170.1 vs. uniprot
Match: A0A0L0DC07_THETB (GDP-mannose 4,6-dehydratase n=2 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DC07_THETB)

HSP 1 Score: 248 bits (632), Expect = 1.280e-78
Identity = 115/180 (63.89%), Postives = 146/180 (81.11%), Query Frame = 0

Query:    4 QAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGTEITWVGEGVEEYGHAK--GDPENVLVKVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFTELVKDMMKADIAHVDAGNE 181
            +AY M   NGILFNHESPRRG TFVTRKITRAVA+I  GKQK +YLGNLDAKRDWGHARDY++GMW+M+Q +EP D+VL+TGE H+V+ F + +FK +G E+TW GEG+EE G +   G+P   +VKVDP YFRPTEV+LLLGD TKA+ +LGWVPE++F  LV+DM+ AD+  + AG++
Sbjct:  196 EAYNMFACNGILFNHESPRRGATFVTRKITRAVAKIAAGKQKVVYLGNLDAKRDWGHARDYVRGMWMMMQAEEPEDFVLATGETHTVRSFCDAAFKVIGVELTWQGEGIEEVGISSVTGEP---VVKVDPAYFRPTEVDLLLGDPTKARTKLGWVPEVTFDALVRDMVVADLEEIGAGDK 372

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig12622.2170.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig12622.2170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5LD75_9PHAE	4.230e-128	98.33	GDP-mannose 4,6-dehydratase n=6 Tax=Phaeophyceae T...	[more]
A0A4D9D4U1_9STRA	5.970e-87	69.83	GDP-mannose 4,6-dehydratase n=1 Tax=Nannochloropsi...	[more]
A0A8J2SRK3_9STRA	5.170e-86	72.00	GDP-mannose 4,6-dehydratase n=3 Tax=Pelagomonas ca...	[more]
K0T9K6_THAOC	1.470e-83	71.43	GDP-mannose 4,6-dehydratase n=1 Tax=Thalassiosira ...	[more]
A0A835Z0Z6_9STRA	7.040e-83	67.98	GDP-mannose 4,6-dehydratase n=1 Tax=Tribonema minu...	[more]
F0YLN7_AURAN	3.390e-82	67.80	GDP-mannose 4,6-dehydratase n=2 Tax=Aureococcus an...	[more]
A0A482T0S9_9ARCH	6.950e-82	65.75	GDP-mannose 4,6-dehydratase n=1 Tax=archaeon TaxID...	[more]
A0A7S2XZ47_9STRA	2.480e-80	64.04	GDP-mannose 4,6-dehydratase n=1 Tax=Fibrocapsa jap...	[more]
A0A7S2GBW7_9STRA	5.530e-79	65.92	GDP-mannose 4,6-dehydratase n=1 Tax=Florenciella p...	[more]
A0A0L0DC07_THETB	1.280e-78	63.89	GDP-mannose 4,6-dehydratase n=2 Tax=Thecamonas tra...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016040	NAD(P)-binding domain	PFAM	PF16363	GDP_Man_Dehyd	coord: 3..168 e-value: 1.4E-67 score: 228.4
None	No IPR available	GENE3D	3.90.25.10		coord: 24..84 e-value: 1.6E-20 score: 75.6
None	No IPR available	GENE3D	3.90.25.10		coord: 85..154 e-value: 2.1E-16 score: 62.0
None	No IPR available	PANTHER	PTHR43715	FAMILY NOT NAMED	coord: 4..176
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 4..172

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig12622	contig	Ecto-sp13_S_contig12622:2793..4645 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig12622.2170.1	mRNA_Ecto-sp13_S_contig12622.2170.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig12622 2793..4645 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig12622.2170.1 ID=prot_Ecto-sp13_S_contig12622.2170.1|Name=mRNA_Ecto-sp13_S_contig12622.2170.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=184bp
MGHQAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYLG
NLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKY
VGTEITWVGEGVEEYGHAKGDPENVLVKVDPRYFRPTEVELLLGDCTKAK
KELGWVPEISFTELVKDMMKADIAHVDAGNEHL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom
IPR036291	NAD(P)-bd_dom_sf