prot_Ecto-sp13_S_contig9982.21630.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9982.21630.1
Unique Nameprot_Ecto-sp13_S_contig9982.21630.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length375
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9982.21630.1 vs. uniprot
Match: D7G761_ECTSI (Imm downregulated 15 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G761_ECTSI)

HSP 1 Score: 734 bits (1895), Expect = 4.350e-267
Identity = 369/375 (98.40%), Postives = 372/375 (99.20%), Query Frame = 0 
Query:    1 MAPGRISAAALLVLAQHLHVDAFSMNGFAGASVRPQQTRTASSASPSMVAAAPPSGKPMTKEMQRKMERLEQERIRKYVTPSETYANQPLSTPTSEHLIGEEMVKDDATASALADKCILEAERLFASDEGWTKVLEDDGIFVETKDVAGPYLKSGVRVVRGLGAINADCDDFYNFQVSREGFQSIDEYLENHRNVERHEWVTQPQYENMKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKSALHPDRPGGSRYQTEVPLDETDYVRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFWINKFNAHVFITPKYKRFRRVMEDGEEVFELSNIVNEAWKLPKLLMIKPDHSVAKGSNFVDNLRNQGIE 375
            MAPGRISAAALLVLAQHLHVDAFS+NGFAGASVRPQQTRTASSA+PSMVAAAPPSGKPMTKEMQRKMERLEQERIRKYV P E YA+QPLSTPTSEHLIGEEMVKDDATASALADKCILEAERLFASDEGWTKVLEDDGIFVETKDVAGPYLKSGVRVVRGLGAINADCDDFYNFQVSREGFQSIDEYLENHRNVERHEWVTQPQYENMKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKSALHPDRPGGSRYQTEVPLDETDYVRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFWINKFNAHVFITPKYKRFRRVMEDGEEVFELSNIVNEAWKLPKLLMIKPDHSVAKGSNFVDNLRNQGIE
Sbjct:    1 MAPGRISAAALLVLAQHLHVDAFSVNGFAGASVRPQQTRTASSAAPSMVAAAPPSGKPMTKEMQRKMERLEQERIRKYVNPPEAYADQPLSTPTSEHLIGEEMVKDDATASALADKCILEAERLFASDEGWTKVLEDDGIFVETKDVAGPYLKSGVRVVRGLGAINADCDDFYNFQVSREGFQSIDEYLENHRNVERHEWVTQPQYENMKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKSALHPDRPGGSRYQTEVPLDETDYVRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFWINKFNAHVFITPKYKRFRRVMEDGEEVFELSNIVNEAWKLPKLLMIKPDHSVAKGSNFVDNLRNQGIE 375
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BLAST of mRNA_Ecto-sp13_S_contig9982.21630.1 vs. uniprot
Match: A0A0G4HAE1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HAE1_9ALVE)

HSP 1 Score: 324 bits (831), Expect = 9.870e-105
Identity = 163/286 (56.99%), Postives = 214/286 (74.83%), Query Frame = 0 
Query:   87 NQPLSTPTSEHLIGEEMVKDDATASALADKCILEAERLFASDEGWTKVLEDDGIFVETKDVAGPYLKSGVRVVRGLGAINADCDDFYNFQVSREGFQSIDEYLENHRNVERHEWVTQPQYENMKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKSALHPDRPGGSRYQTEVPLDE--TDYVRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFWINKFNAHVFITPKYKRFRRVMEDGEEVFELSNIVNEAWKLPKLLM----IKPDHSVAK-GSNF 365
            N  +S P SE LIGEE+V DD +AS L+D+C+ E +RL  S++GW    E +G  VETK   G Y  SGV +VRG+G I+A  DDF+ +QVSREGFQ IDEYL NHR V++++W+T+P+ E+ KDYELM NRVEW YP ++REFVALD + RP ++LISKSALHP+RPGGSRYQ  + +D   + +VRAVQYY SKVEP+   KCLL MVTWGEMCD+Y+A+W+N+FN ++FITPK++RFR  M  G+ V+E SNIVN AW + KL      +KPD ++ K G++F
Sbjct:  140 NLGVSLPESEDLIGEELVTDDMSASLLSDRCMSELDRLIKSEDGWQSE-ELEGCVVETKKTHGAYGLSGVDIVRGVGEIDASADDFFEYQVSREGFQCIDEYLVNHRKVDQYKWLTRPELESGKDYELMMNRVEWRYPFKSREFVALDTVHRPERVLISKSALHPERPGGSRYQDALEVDPPGSPFVRAVQYYGSKVEPVGPNKCLLYMVTWGEMCDNYSAWWVNQFNKYLFITPKFRRFREAMS-GKTVWEESNIVNNAWDILKLKHNMGGLKPDRTILKNGADF 423
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9982.21630.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G761_ECTSI4.350e-26798.40Imm downregulated 15 n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A0G4HAE1_9ALVE9.870e-10556.99Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 63..324
e-value: 2.8E-8
score: 35.7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..375
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..35
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.635
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 110..316

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9982contigEcto-sp13_S_contig9982:831..4184 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9982.21630.1mRNA_Ecto-sp13_S_contig9982.21630.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9982 831..4184 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9982.21630.1 ID=prot_Ecto-sp13_S_contig9982.21630.1|Name=mRNA_Ecto-sp13_S_contig9982.21630.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=375bp
MAPGRISAAALLVLAQHLHVDAFSMNGFAGASVRPQQTRTASSASPSMVA
AAPPSGKPMTKEMQRKMERLEQERIRKYVTPSETYANQPLSTPTSEHLIG
EEMVKDDATASALADKCILEAERLFASDEGWTKVLEDDGIFVETKDVAGP
YLKSGVRVVRGLGAINADCDDFYNFQVSREGFQSIDEYLENHRNVERHEW
VTQPQYENMKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKSALH
PDRPGGSRYQTEVPLDETDYVRAVQYYASKVEPLPDGKCLLRMVTWGEMC
DSYTAFWINKFNAHVFITPKYKRFRRVMEDGEEVFELSNIVNEAWKLPKL
LMIKPDHSVAKGSNFVDNLRNQGIE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf