mRNA_Ecto-sp13_S_contig9951.21599.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9951.21599.1
Unique NamemRNA_Ecto-sp13_S_contig9951.21599.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: D7FJL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL8_ECTSI)

HSP 1 Score: 577 bits (1488), Expect = 1.680e-202
Identity = 294/307 (95.77%), Postives = 300/307 (97.72%), Query Frame = 1
Query:    4 LGEQLDEILVWSPKSEIMKRAKSTGGRT-TGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTISGSQAGKQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPEGVQAKARAILDKRQGFISAIEITNPGSGYNTALAPVTVEVFGSEVDETGDDLVESVLKEGTGGAMGETSCPSNFVAEAIVDREV 921
            LGEQLDEI+VWSPKSEIMKRAKSTGGRT TGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFS LEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSF+EESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVT+SGSQAGKQATAR VLRETGHLVGVRLKDCGSSKSFEAPP VYVSAPADPEGVQA+ARAILDKRQG ISAIEITNPGSGYNTALAPVTVEVFGS+VDETGD LVESVL EGTGGAMGET+CPSNFVAEAIVDREV
Sbjct:   20 LGEQLDEIVVWSPKSEIMKRAKSTGGRTATGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSMLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFMEESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTVSGSQAGKQATARVVLRETGHLVGVRLKDCGSSKSFEAPPRVYVSAPADPEGVQAEARAILDKRQGSISAIEITNPGSGYNTALAPVTVEVFGSDVDETGDYLVESVLNEGTGGAMGETACPSNFVAEAIVDREV 326          
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A6H5LAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAW5_9PHAE)

HSP 1 Score: 589 bits (1518), Expect = 4.450e-202
Identity = 299/305 (98.03%), Postives = 304/305 (99.67%), Query Frame = 1
Query:   10 EQLDEILVWSPKSEIMKRAKSTGGRT-TGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTISGSQAGKQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPEGVQAKARAILDKRQGFISAIEITNPGSGYNTALAPVTVEVFGSEVDETGDDLVESVLKEGTGGAMGETSCPSNFVAEAIVDREV 921
            EQLDEILVWSPKSEIMKRAKSTGGRT TGTNETYPVRFVTYLARFLLNYD+ASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTISGSQAGKQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPEGVQAKARAILDKR+GFISAIEITNPGSGYNTALAPVTVEVFGSEVDETGD+LVESVLKEGTGGA+GET+CPSNFVAEAIVDREV
Sbjct:  249 EQLDEILVWSPKSEIMKRAKSTGGRTATGTNETYPVRFVTYLARFLLNYDRASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTISGSQAGKQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPEGVQAKARAILDKRKGFISAIEITNPGSGYNTALAPVTVEVFGSEVDETGDELVESVLKEGTGGALGETACPSNFVAEAIVDREV 553          
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A835ZA12_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA12_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.590e-53
Identity = 140/376 (37.23%), Postives = 183/376 (48.67%), Query Frame = 1
Query:   19 DEILVWSPKSEIMKRAKSTGGRTTGTN---ETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECK------RQLAILFSFIEESQPTESIEL----------------------LLGEVDNGQVNNIVVTDPGGGYTGKVPK-VTISGSQAGKQ-ATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPEGVQ------------------------------------AKARAILDKRQGFISAIEITNPGSGYNTALAPVTVEVFG-SEVDETGDDLVESVLKEGTGGA-----MGETSCPSNFVAEAIVDREV 921
            D  LVWSP+S I++RAK  GGR    N    TY  RFVTYLARFLLNYD+ SRQLW+R A  IP +    E    RR QFAEFA AV+VGLLD+QG QG +A FSL+RSRYG G + K      RQLAILFSF+   QP   ++                       +LGE+D+  ++ I V   G GY+   P  VTIS  Q G + A A AVL ETG +  +RL     +  +++PP                                                  A   A+LD   G + A+++  PG+GYN+A APVTV++ G +++D  G   V S    G GG       G  +C +     A++D  V
Sbjct:   28 DTDLVWSPRSAILERAKGAGGRAAPENLKNSTYGPRFVTYLARFLLNYDRGSRQLWERRAQDIPSSIPVREATKQRRQQFAEFAGAVEVGLLDYQGAQGARALFSLLRSRYGWGADSKGGEERLRQLAILFSFLNRYQPVAQLQAXXXXXXXXXXXXXXXXXXXXXSVLGEIDDAGISQISVVTGGSGYSADAPPAVTISQPQWGTRGAQASAVLGETGRIAALRLAGSPCAYRYQSPPEXXXXXXXXXXXXXXXXXXXRCAVXXXXXXXXXXXXXXXXXXXXXXXXXXATGEAVLDAT-GRLIAVKLLQPGAGYNSAEAPVTVDLVGVADIDMPG---VNSATLTGAGGVGASDEQGIMACGAYPQVTAVLDTAV 399          
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: W7TIQ8_9STRA (Mitochondrial phosphate carrier protein 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIQ8_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.380e-44
Identity = 105/269 (39.03%), Postives = 149/269 (55.39%), Query Frame = 1
Query:    4 LGEQLDE--ILVWSPKSEIMKRAKSTGGRTTGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVP-KVTISGSQ--AGKQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPA-DPEGVQAKARAILDKRQGFISAIEITNPGSGYNTALAPVTVEVF 792
            LGE+ +    L W   SE+  RA+    +  G  +TYPVRFVTYL RFL+N+D+  + LW ++A  IP  +    V   RR QFA  A + ++GL D+QG +G++  F L++ RYGQ  E +RQLAILFSF+E+ QP + I  +L + DN +V    +   G GYT + P +VTIS       + A ARAVLRETG L  + L   GS  +   PP V +S P   P+  +A+A A+L++  G +                 PVTV + 
Sbjct:  271 LGEKANRKGYLGWRRLSEVEGRARD---QNRG-QKTYPVRFVTYLTRFLVNFDEDDKLLWAKLARDIPFTYKEALVAETRRGQFAAIADSAEIGLYDYQGTEGVQRLFELLKDRYGQTSEARRQLAILFSFLEKDQPVQGIARMLVDTDNARVAAFRLVTGGDGYTARTPPRVTISSPMMPTPQPARARAVLRETGSLRRLVLTSSGSIYTQGIPPEVVISEPPRGPDARRARAEAVLERGTGRVXXXXXXXXXXXXRKDGPPVTVTIL 535          
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A0M0K1B3_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K1B3_9EUKA)

HSP 1 Score: 168 bits (426), Expect = 1.850e-43
Identity = 107/282 (37.94%), Postives = 155/282 (54.96%), Query Frame = 1
Query:   25 ILVWSPKSEIMKRAKSTGGRTTGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEES-QPTESIELLLGEVDNGQVNNIVVTDPGGGYTG-KVPKVTISGSQAG-----KQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPEGVQAKARAILDKRQGFISAIEITNPGSGYNTALAPVTVEVFGSEVDETGDDLVESVLKEG 849
            +L W P+S I +  + T         +Y  RF+TYLARFLLN+D+ S   W   +  +P+  +   + AVR  QF +F+++V+VGL+ +QG QG++  FSLMRSRYG+    K QLA+LFS I  + QP++ IE  LGE +NG VN + +T  G GYT  + PKVT++    G       A  RAVL  +G++ GV L + G    + + P V  S P D  G  A+A AI++   G + A+E+   G GY    A   V       DE G  L + +  +G
Sbjct:   42 VLEWEPRSSIPRLTEKT---------SYQPRFITYLARFLLNFDRGSAAWWAEQSRQLPVGLNREALRAVRERQFGQFSESVEVGLVRYQGQQGVRVLFSLMRSRYGKTPLAKVQLALLFSLISAANQPSDLIENALGEAENGHVNQVFLTSGGRGYTSAEPPKVTLTPPDGGLGKMKTPAQIRAVLEVSGNVRGVTLTNSGGG--YSSAPAVSFSPPRD-GGRPAEAIAIVEG--GRVVAVEMMYAGDGYTERDANSVVVTIEPPRDEQGVPLADGISAQG 309          
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A7S2CVF3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CVF3_9EUKA)

HSP 1 Score: 141 bits (355), Expect = 1.630e-37
Identity = 73/170 (42.94%), Postives = 103/170 (60.59%), Query Frame = 1
Query:   28 LVWSPKSEIMKRAKSTGGRTTGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEES-QPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTISGSQA 534
            LVW P+S +  +A+S+         +Y  RFVTYLARFLLN+D  S   W      +P   S  E+ A+R+  F +F+++V+VGLL +QG  G++  FSL+RSRYG   + K QLA+LFS I  S QP + IE  LGEV+ G +  I +T+PG GYT + P   +  + A
Sbjct:   32 LVWQPRSSVPVKAQSS---------SYAPRFVTYLARFLLNFDAGSAAWWAEQGQRLPSKLSRDELAAIRQKSFGQFSESVEVGLLKYQGRTGVRNLFSLLRSRYGSSAQAKIQLALLFSLISASNQPVDKIERALGEVEQGAIKVITLTNPGSGYTNRTPPAVLVSAPA 192          
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A7S4FCX2_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FCX2_CHRCT)

HSP 1 Score: 132 bits (332), Expect = 2.930e-34
Identity = 80/167 (47.90%), Postives = 101/167 (60.48%), Query Frame = 1
Query:   28 LVWSPKSEIMKRAKSTGGRTTGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQ-GIKAFFSLMRSRYGQGEECKRQLAILFSFIEES-QPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTIS 522
            LVW P+SE+  RA  +GG        YP RFVTYLARFLLNYD  SRQ W   ++++P+  S   +  +R  QF +F+++VQVGL  F  P  G +  +SL+RSRYG   + K QLAILFS I    QP++ I   LGE DN  V  I V D G GYT + P V IS
Sbjct:   17 LVWEPRSELPVRA--SGG------VEYPPRFVTYLARFLLNYDAGSRQWWSDQSSSLPLGVSRAALVELRIKQFEQFSQSVQVGLQQFSKPMDGPRQLYSLLRSRYGVSRQNKLQLAILFSLIPAPRQPSDLIRRALGEYDNASVATITVIDGGSGYT-EAPVVAIS 174          
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A6S8WEP6_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8WEP6_9STRA)

HSP 1 Score: 139 bits (349), Expect = 5.130e-33
Identity = 96/288 (33.33%), Postives = 143/288 (49.65%), Query Frame = 1
Query:   22 EILVWSPKSEIMKRAKSTGGRTTGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYG----------------------------QGEECKRQLAILFSFIEESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTISGSQAG------KQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPE-----GVQAKARAILDK---RQGFISAIEITNPGSGYN 759
            E + W+  S + KR+   G       ETY VRF+TYL+RFLL++D   ++ W + A  IP   S  +VE+ R  QF  F+ +V+VGL +++G +G K    L+  RYG                            + +E KRQ+A+LFS ++  QP E I  LL  +DNG V  +V+ +PGGGY  +  +  ++    G        AT RAVLR +G ++ V +   G    +  PP V +S P   +        A A+A L K    +G I  I +T+PG+GYN
Sbjct:  164 EEITWTA-SPVNKRS---GVSFFKAEETYNVRFITYLSRFLLSFDDECQKWWYQRAKDIPRTASADQVESKRLSQFGAFSASVEVGLQEYEGAEGPKQLIKLLLDRYGGDLEEVKAAREVKGQAALKPNEEEMEKREIKEAKRQIALLFSLLKTYQPVEEITALLAAIDNGMVKKVVIENPGGGYAPEYGEPVVTFPPPGGYVDGINAATGRAVLRPSGKVLRVDISKRGFG--YTKPPTVVISPPIAEDFGSLTAKAATAKASLFKDGVNEGRIERILLTSPGNGYN 445          
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A8J6C5U2_DIALT (Uncharacterized protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C5U2_DIALT)

HSP 1 Score: 126 bits (316), Expect = 1.170e-28
Identity = 83/231 (35.93%), Postives = 123/231 (53.25%), Query Frame = 1
Query:   31 VWSPKSEIMKRAKSTGGRTTGTNETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGL-LDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFIEES-QPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPK--------VTISGSQAGKQATARAVLRETGHLVGVRLKDCGSSKSFEAPPPVYVSAPADPEGVQAKARA 693
            VW P    ++RA  +        E YP RF TYLARFLL YD+ SR+ W+  A  IP++FS  +V  +R + +AEF ++V++GL  ++ GP+G++    L+R+R+    E +RQLA+L + +  + QP   +  LLGE DN  V  + V D G GY    P          + +G + G +A  RAV+ E G +V V +   G   SF  P  + + AP  P    A  RA
Sbjct:   76 VWMP----LERAMGSSPGDARGREEYPPRFSTYLARFLLKYDRKSRRWWNSKAEEIPLSFSASKVRELRLEHYAEFTRSVELGLEREYAGPRGVQELVQLLRARFTSTAE-RRQLALLLTLLPPAHQPAADVAELLGEADNATVRTVRVLDGGAGYDELAPPDVALTPPAASTAGGRNGARAQLRAVV-ERGRVVAVEVLAPGLGYSFVQPLELTI-APXPPHRTAAPPRA 299          
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Match: A0A7S3ZFI1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZFI1_9EUKA)

HSP 1 Score: 118 bits (296), Expect = 1.520e-28
Identity = 64/158 (40.51%), Postives = 98/158 (62.03%), Query Frame = 1
Query:  100 ETYPVRFVTYLARFLLNYDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGPQGIKAFFSLMRSRYGQGEECKRQLAILFSFI-EESQPTESIELLLGEVDNGQVNNIVVTDPGGGYTGKVPKVTISG--SQAGKQATARAVL 564
            + +P+RFVTYL RFLLNYD  S + W++    IP+++++ +V  +R  Q+ +FA +V++GL  F+  +GI A  + + + +      KRQL+ILFSF+  + QP   IE L+ E DN  V+ I VTD G GY  + P V IS    ++G  ATA+A +
Sbjct:   56 QVFPLRFVTYLTRFLLNYDAKSSKFWEQAGANIPLSYTSEQVREMRLRQYGDFAASVELGLKPFESKEGIIALTTALSNTF-TSNSAKRQLSILFSFLTNDDQPVSYIESLIAEADNATVSQITVTDAGSGYL-RPPAVRISSPIGRSGATATAKAAM 211          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9951.21599.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJL8_ECTSI1.680e-20295.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LAW5_9PHAE4.450e-20298.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZA12_9STRA1.590e-5337.23Mitochondrial carrier domain-containing protein n=... [more]
W7TIQ8_9STRA1.380e-4439.03Mitochondrial phosphate carrier protein 2 n=2 Tax=... [more]
A0A0M0K1B3_9EUKA1.850e-4337.94Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A7S2CVF3_9EUKA1.630e-3742.94Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S4FCX2_CHRCT2.930e-3447.90Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A6S8WEP6_9STRA5.130e-3333.33Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A8J6C5U2_DIALT1.170e-2835.93Uncharacterized protein n=3 Tax=Diacronema lutheri... [more]
A0A7S3ZFI1_9EUKA1.520e-2840.51Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9951contigEcto-sp13_S_contig9951:858..5602 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score576.6
Seed ortholog evalue6.7e-162
Seed eggNOG ortholog2880.D7FJL8
Model size921
KEGG koko:K15102
KEGG TC2.A.29.4
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.phosphate ion transmembrane transport
EggNOG OGsKOG0767@1,KOG0767@2759
Cds size921
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9951.21599.1prot_Ecto-sp13_S_contig9951.21599.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9951 858..5602 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464255.2030048-CDS-Ecto-sp13_S_contig9951:857..9611681464255.2030048-CDS-Ecto-sp13_S_contig9951:857..961Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9951 858..961 +
1681464255.215719-CDS-Ecto-sp13_S_contig9951:1698..18061681464255.215719-CDS-Ecto-sp13_S_contig9951:1698..1806Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9951 1699..1806 +
1681464255.2264898-CDS-Ecto-sp13_S_contig9951:2059..21951681464255.2264898-CDS-Ecto-sp13_S_contig9951:2059..2195Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9951 2060..2195 +
1681464255.240428-CDS-Ecto-sp13_S_contig9951:3082..32441681464255.240428-CDS-Ecto-sp13_S_contig9951:3082..3244Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9951 3083..3244 +
1681464255.2626224-CDS-Ecto-sp13_S_contig9951:3773..38771681464255.2626224-CDS-Ecto-sp13_S_contig9951:3773..3877Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9951 3774..3877 +
1681464255.2734845-CDS-Ecto-sp13_S_contig9951:4511..46831681464255.2734845-CDS-Ecto-sp13_S_contig9951:4511..4683Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9951 4512..4683 +
1681464255.2830012-CDS-Ecto-sp13_S_contig9951:5467..56021681464255.2830012-CDS-Ecto-sp13_S_contig9951:5467..5602Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9951 5468..5602 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9951.21599.1

>prot_Ecto-sp13_S_contig9951.21599.1 ID=prot_Ecto-sp13_S_contig9951.21599.1|Name=mRNA_Ecto-sp13_S_contig9951.21599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=307bp
KLGEQLDEILVWSPKSEIMKRAKSTGGRTTGTNETYPVRFVTYLARFLLN
YDKASRQLWDRMATTIPINFSTLEVEAVRRDQFAEFAKAVQVGLLDFQGP
QGIKAFFSLMRSRYGQGEECKRQLAILFSFIEESQPTESIELLLGEVDNG
QVNNIVVTDPGGGYTGKVPKVTISGSQAGKQATARAVLRETGHLVGVRLK
DCGSSKSFEAPPPVYVSAPADPEGVQAKARAILDKRQGFISAIEITNPGS
GYNTALAPVTVEVFGSEVDETGDDLVESVLKEGTGGAMGETSCPSNFVAE
AIVDREV
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mRNA from alignment at Ecto-sp13_S_contig9951:858..5602+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9951.21599.1 ID=mRNA_Ecto-sp13_S_contig9951.21599.1|Name=mRNA_Ecto-sp13_S_contig9951.21599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4745bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9951:858..5602+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAACTGGGGGAGCAACTGGACGAAATCCTTGTGTGGAGCCCGAAGTCGGA GATCATGAAGCGGGCCAAGTCTACCGGGGGGAGGACGACAGGCACAAACG AGACGTGAGTCATCGCACCAGCACCAGCACCAGCAGCGGTATCAGCTTGG ACAGGACAGGACTGGGCTCCTTATGATCTAGTTTACCGCTTAGGACGCTC AACCTCTGGGCTAACCCTGATGTTGCTTACGGCCATAGAAATTCAAGCTC TAGACGAGCCCTGATGTGTTTTACAGCCCACACTCTCAAGCTCTAGACTA GCCCTGATGTATTTTACGGCCCACACTCTCAAGCTCTAGACGAACCCTGA TGTAGTTTACCGCCTGAACGCTCGAGCTCTGGAGGGGGCTTGGGGGATAA GGGCATGCAAGGAAGAGATCTCTCCGGCATGCAGCAAGCAAGTACCGTTA GATGCCACACCCACCGGACGGACCGACTTTGAAAGCTCGATTACTCTGCG GCAATGGCGGCGTTGAAACCGTCTCATCGAGAGCTTCCCGAACGCATAAT GCGATTGTGCCTGGCGTTGCTATTGTGCGTAGATCTCATCGTAAGCCTGT ACCACATCAGTATGATAGCAACTCTATCGAAATTGTTTTTTCCTAACGTA GCTGGAGCTAGTTCACCTCTTTTTACAACCACCGTGCCAGGTATCGTCAA TATGCTCCCAGCACTTTCTACTCCTGTTTTGTTTTTGTGCTTCCCGCAAT AGTACGGATCTCTTGTGTCTCCCTTGTGTTTACCATTTCTGCGCCGCCGT ATTCCTCCTACTGGTATTGTTTTATTGTTTTGGTTGTGCAGGTACCCAGT GCGTTTCGTCACGTACCTGGCGCGCTTCCTTCTCAACTACGACAAGGCTA GCAGGCAGCTGTGGGATAGGATGGCTACCACCATCCCGATCAACTTCAGG TACATAGACACTGCTGTACCGCACCACGTTTTGGTGATGCCGACCCGTAT CGCACAGCGCGCGTTTCCGTGTCGCAACGTACCATACTGTGGAGCTCCCC GCACCACATATCACGGCACCGGGTGGGCGGCCACCTGCGGGAGAGAAAGC ATCCAGATGTGTATCTAAAGCAGTGTATGGGTTGACGGAAATCACCATGC GGTGCCCCCCCTCCTCTCTATTTCGTTCTCGACACCGCCTGTGTCTTGGC AGCACGCTTGAGGTGGAAGCGGTGCGGCGGGATCAGTTTGCCGAGTTCGC TAAGGCTGTTCAGGTGGGGCTGCTGGACTTCCAGGGTCCGCAAGGAATAA AGGCGTTCTTCTCGCTCATGCGCTCCAGATATGGCCAGGTGATTTCACAT TCTCGTTTACTGGACTTCGTTTGGAAAAAAAATTAAATCGCTGTGTTGCC TTTCGCGCTGCGTGACTGACCCCAGCTGATACATCATACATGTTGTACGT CAAGCACACGTGTGCAAGGAAAGGGACAGGCTGATCAGAATAGATGGGAC GAACACACCCACCCAAGTAGAGGTGGCGCACGTCTCGGGCATCGTTTTCC ACCGCCGAACATGCTTTGCGGGTTGCGTATGCGAGTTGCGATGTCCTGAC ACGCCTTGATTGTTTTTATCGATCACCTTTGCCTGTTGGTATCTGAGGTT GCTGATTGTAGGGGCTGGAATGAGAGGGCAAGGCCTTGCCTTCGCTTCGA GTGCGCTCCTATGTGGGCGAATAAGACCACCTGCTTTATAGAGAGTTCTG TTTTATTTGTGTGTGTTTTGTTGAACACGCGAGTTCGGCTGCATGCAGTA GGCGGTTTCCGCCCGAGACCCACTTCGTTACAAATGATCCATCTATGTAG TTTGTGAGAATGATCTCGAAACATTGAGGAAATGCATACCATTGGACAGA TGTTTAGGGTAAAACGAAAATCATTCGTGCTTCATACAGCAACAGCAGCG GCCCTAGCCCCACGGAATCGTCCCTCTTTGTGCTATGCAATGCGGCGGTA TCGTGCTAGGTTAAGCCCGAGTAGAAGCAAGAGGAGTCTCTATTGGCCTC CAGAGGGCTCAAGGGAGGAGAGAGAAGCTGACCTCGCCCTCCCAAGCCTT TTTTTTCCCGAACCATCACCAACAGCAGCACCCTCCCAAAAACTGTTCTC ATACATGGTACATTCCACGGAATGCCTCCGGATTCCCCAACGTTTGACGG AATGTTTCCGTGCCAATCGACGCAGGGTGAGGAGTGCAAGAGGCAGCTCG CCATTCTGTTCAGCTTCATAGAGGAGTCTCAGCCGACTGAGTCGATCGAA TTGCTCTTGGGAGAGGTTGACAACGGGCAAGTCAACAACATCGTCGTCAC CGATCCAGGCGGAGGATACACTGGCAAGGTTCCTAAGGTGGGACGGTATA TGGTAGAACTTTTGTGTGTTTTGTGCGTGAAATCTTTTGTTGACTTTTCG TGCATTTTTTCTTGTTTTTTGGAGGTCGTGTGGTGGTATCATGTCCCAGG CGCATCTTGTTTTTGTCGTTGTGTCTGATGACCATGACGATGAACCGTCT CTTGAGCCGCCGCACGGCGCCTGCCCGCCTCTACCGTATTCACCGTACAC CTGCCTAGCCTACCTCACTTGTTGTGCATCACGTCGTTGTCGTTGTCGTT GACGTTGCTGCTGTTGCTTCTTCTTCTTTTTCTTTTTGTTCTTTCTCTTC TTCTTCTTCTTGTTCCTCTTTATCTTCTTGTTCTTTCTCTTCTTCTTCTT CTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCT TCTTGCTGTTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTGCTGCTTC TGCTGCTGGTGTTTGATGGATGCTGCTGCTGCCGATGGCGTATGCTTGTC GTTAATTGGTCGAAAGGTTACGATCTCCGGATCCCAAGCCGGGAAGCAGG CCACCGCTCGAGCCGTCCTGAGAGAGACAGGCCACTTGGTGGGCGTTCGA CTAAAAGACTGCGGCTCAAGGTAGACGAGAGAGTGCACGCTGATTGACGA AATCGCGCTTTGTGGTCGTTGTTGCCCGTGCTTTTTGCGGTGGTGTTAGT TGCGCTGTTGACGTCCATCTATCCGTCGTCGTTGCTGTTGGCGAAAGCTT ACGCTAGCCTAGCACAACCTCGGTGGTGGGTTTGACGGCGTTCGTGTCAA GATCACGATGCGGACGGTGGAAGCGATGTTGATGACACTACGATACCGCA GTCTTGACGACTTCAGAAATCTCGAATACAAGACTCAGACTCGTACAGCA GCACTTTGGCCGTAACCCCCCCCGTTTGAGCGTCGTACATCGTACCACGT TTTTTTGTACATGTGAAGACGACAACCAAACAACGGCAACAACAGACTCT CGTGCCCGGTGCCCTCAATCAAGTGGTGCATCCTGCTTCAGGATTGAGGC ATCGTGTGGTCACTTTTGTGGTTCATTACTAGAGTTTCTCTTCCACAAAC ATATGTACTCCTCCGGCCCGGCTGTCAACTCACCGGAGGAGAGATAAAAT CAACGAGCTGTCAAGCCCCCATGTATGCCATCGAACGTCCTTCCTTGTCG ACTCCTTTTTCTTTCTCTGTTTCTGTTTCTGTTTCTGTTTCTTTTTCTTT GCAGCAAAAGCTTCGAAGCCCCTCCGCCAGTGTACGTGAGTGCTCCTGCG GATCCCGAAGGAGTTCAGGCCAAGGCCAGGGCTATCTTGGACAAGAGACA GGGCTTCATCTCCGCCATCGAGATTACCAACCCCGGCTCTGGGTACAACA CCGCTCTTGCCCCCGTAACGGTAGAGGTGAGCGGGTGTCTCGGTGTGGGG GTGGTGGTGTGGGTTATGCTATGGTTTTTTTGTCCCGTATTTTATTCCAT GTGGTACCAGAATTCCATATCTTGCCCCGTTTACGGTGGAGGTGAGCGGG TGTCTCGGTGTGGTGATGGTGGTGGTGTGGATTTCGTTGTGGTTATTTCG TCCCGTATTTATGTTCCATGTGGTACCGGTATTCCATCTCTTGCCCCCGT TACGGTAGAGGTGAGCTGTGTTACGGTGGAGGTGATGGTGGTCTCACCCC CTTTCTTTTTCGCCCCGTTTTTTTTGTGTCCCTTATTGTGCCGGTATTCC GTGATTGTTGTTGTACCGTCTCTTGCTCCCGTCACGGCAGGGGTGAGCAG GTGTTTGGTGGTGGTGGTGTTTGGTGGTGGTGGTGGTGGTGGTGGTGGTC CCTTTTTTGTATTTTTCTCTCGTCCCTTTTCTGTGCGGTGTTTCATGTGG TCCGGTTTTCCGTGATCAGTGTTCCGTGTTTGTTCTGCGACGGTCGAGGG CGTGTTTGTGTCGGGGTACATGTTGTTGAGTGTTTCTCTGTAGATGTTAG ACACAAAGCACACACAAGCGGCGCGCGCGTGTTTCTCAATTGACATCCAT ACTTTTTGTGGCCAAGACAACAAAAAGACAGAACATATCGTCGGCTGTCA AGTCTGGCCATGGCCTGGGATTATTACCCCGTCAGGAACTAGCTGGGAAG AAGGGTTCGATACATGTCCCTGTCTGTCACGTTTAAAATTGTTTTTGTGG CGCTAAAAAGGTGTTCGGGTCGGAAGTGGACGAGACGGGCGATGACCTGG TGGAAAGCGTGTTGAAGGAGGGTACAGGGGGAGCTATGGGGGAGACCTCT TGCCCATCTAACTTTGTGGCAGAGGCGATCGTCGACAGGGAAGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9951:858..5602+

>mRNA_Ecto-sp13_S_contig9951.21599.1 ID=mRNA_Ecto-sp13_S_contig9951.21599.1|Name=mRNA_Ecto-sp13_S_contig9951.21599.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=921bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9951:858..5602+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAACTGGGGGAGCAACTGGACGAAATCCTTGTGTGGAGCCCGAAGTCGGA
GATCATGAAGCGGGCCAAGTCTACCGGGGGGAGGACGACAGGCACAAACG
AGACGTACCCAGTGCGTTTCGTCACGTACCTGGCGCGCTTCCTTCTCAAC
TACGACAAGGCTAGCAGGCAGCTGTGGGATAGGATGGCTACCACCATCCC
GATCAACTTCAGCACGCTTGAGGTGGAAGCGGTGCGGCGGGATCAGTTTG
CCGAGTTCGCTAAGGCTGTTCAGGTGGGGCTGCTGGACTTCCAGGGTCCG
CAAGGAATAAAGGCGTTCTTCTCGCTCATGCGCTCCAGATATGGCCAGGG
TGAGGAGTGCAAGAGGCAGCTCGCCATTCTGTTCAGCTTCATAGAGGAGT
CTCAGCCGACTGAGTCGATCGAATTGCTCTTGGGAGAGGTTGACAACGGG
CAAGTCAACAACATCGTCGTCACCGATCCAGGCGGAGGATACACTGGCAA
GGTTCCTAAGGTTACGATCTCCGGATCCCAAGCCGGGAAGCAGGCCACCG
CTCGAGCCGTCCTGAGAGAGACAGGCCACTTGGTGGGCGTTCGACTAAAA
GACTGCGGCTCAAGCAAAAGCTTCGAAGCCCCTCCGCCAGTGTACGTGAG
TGCTCCTGCGGATCCCGAAGGAGTTCAGGCCAAGGCCAGGGCTATCTTGG
ACAAGAGACAGGGCTTCATCTCCGCCATCGAGATTACCAACCCCGGCTCT
GGGTACAACACCGCTCTTGCCCCCGTAACGGTAGAGGTGTTCGGGTCGGA
AGTGGACGAGACGGGCGATGACCTGGTGGAAAGCGTGTTGAAGGAGGGTA
CAGGGGGAGCTATGGGGGAGACCTCTTGCCCATCTAACTTTGTGGCAGAG
GCGATCGTCGACAGGGAAGTG
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