mRNA_Ecto-sp13_S_contig9936.21583.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9936.21583.1
Unique NamemRNA_Ecto-sp13_S_contig9936.21583.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9936.21583.1 vs. uniprot
Match: A0A6H5KYK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK9_9PHAE)

HSP 1 Score: 1321 bits (3418), Expect = 0.000e+0
Identity = 774/853 (90.74%), Postives = 788/853 (92.38%), Query Frame = 1 
Query:  271 TPVSETPAVAPXPVIPTLLPVATPPEPPASSDSLQPVVAPPTASGTVTNAPVNAAQPVAPGTXXXXXXXXXXXXXXXXXXXXATAPTALAPSAEPVIGVQPSVPPVAAPSATIGQGPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXXXTITTSPAAVPGAPTAEPALAPVVPLLPGQTAAPAARDLPIAGIPTPAPIAGGTARPAAPIVAPVVPGAPTLATTRAPVDPADIPKTPAPVLPPDXXXXXXXXATQPXXXXXXXXXXXXXXXXXVPVATPAPSTNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVEVTRRSLGGWLTEGWNSTSVSPTEGSYYLRRRLEETSDAGFVVTVPGTTTSGLIQSINYFQNNFDRVSEALSVDSEDVQFSSLQFSATSFSPITEEASNSDVQLVVNPPESDASAAAVGMFVLFLVALLLGTCGCLWAILGFCRRQRMRAKEASRKDFFSSKMMGSTAGSVSGASGTGSGDEGEYYHNFNPIRTRGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQASFYQAGAATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGVDGQSTTLDWVHGLQPDDLEKFLAEKKDQRMRVLCLDLEPTGIPQQALRDNDEVVRAANSLQSESSPTSSAQMEPPFHGADNEVSGS 2829
            TPVSET     X  IPTLLPVATPPEPPA+SDSLQPVVAPPTASG +TNAPV+AAQPVAPGT XXXXXXXXXX         ATAPTALAPSAEPVIGVQPSVPPVAAPSATIGQ PTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXXXTITTSPAAVPGAPTAEPALAP         AAPAARDLPIAGIPTP PIAGGTARPAAPIVAPVVPGAPTLA+TRAPVDPADIPKTPAPVLPPD   X  XXATQP XXXXXXXXXXXXXXXX       PSTNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVE TRRSLGGWLTE WNSTSVSPTEG YYLRRRL+ETSDAGFVVTVPG TTSGLIQSINYFQNN+ RVSEAL VDSEDVQFSSLQFSATS SPITEEASNSDVQLVVNPP SDASAAAVGMFVLFLVALLLGTCGCLWAILGFCR QR RAKEASR+DFFSSK+MGSTAGSVSGASGTGSGDEGEYYHNFNPIRT GMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQA+  ++ AATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLG DGQSTTLDWVHGLQPDDLEKFLAEKK+QRMRVLCLDLEPTGIPQQALRD+DEVV AANSLQSESSP SS QME PF GAD+E   S
Sbjct: 1106 TPVSETXXXXXXXXIPTLLPVATPPEPPAASDSLQPVVAPPTASGALTNAPVDAAQPVAPGTTXXXXXXXXXXP--------ATAPTALAPSAEPVIGVQPSVPPVAAPSATIGQEPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXXXTITTSPAAVPGAPTAEPALAPXXXXXXXXXAAPAARDLPIAGIPTPVPIAGGTARPAAPIVAPVVPGAPTLASTRAPVDPADIPKTPAPVLPPDQLPXTSXXATQPTXXXXXXXXXXXXXXXXXXXXXXXPSTNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVEFTRRSLGGWLTEEWNSTSVSPTEGFYYLRRRLDETSDAGFVVTVPGPTTSGLIQSINYFQNNYGRVSEALGVDSEDVQFSSLQFSATSISPITEEASNSDVQLVVNPPASDASAAAVGMFVLFLVALLLGTCGCLWAILGFCR-QRRRAKEASRQDFFSSKLMGSTAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQAT--RSRAATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGADGQSTTLDWVHGLQPDDLEKFLAEKKEQRMRVLCLDLEPTGIPQQALRDDDEVVGAANSLQSESSPASSTQMELPFQGADDETPSS 1947
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BLAST of mRNA_Ecto-sp13_S_contig9936.21583.1 vs. uniprot
Match: D8LG77_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG77_ECTSI)

HSP 1 Score: 1217 bits (3150), Expect = 0.000e+0
Identity = 722/818 (88.26%), Postives = 733/818 (89.61%), Query Frame = 1 
Query:  376 PVVAPPTASGTVTNAPVNAAQPVAPGTXXXXXXXXXXXXXXXXXXXXATAPTALAPSAEPVIGVQPSVPPVAAPSATIGQGPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXXXTITTSPAAVPGAPTAEPALAPVVPLLPGQTAAPAARDLPIAGIPTPAPIAGGTARPAAPIVAPVVPGAPTLATTRAPVDPADIPKTPAPVLPPDXXXXXXXXATQPXXXXXXXXXXXXXXXXXVPVATPAPSTNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVEVTRRSLGGWLTEGWNSTSVSPTEGSYYLRRRLEETSDAGFVVTVPGTTTSGLIQSINYFQNNFDRVSEALSVDSEDVQFSSLQFSATSFSPITEEASNSDVQLVVNPPESDASAAAVGMFVLFLVALLLGTCGCLWAILGFCRRQRMRAKEASRKDFFSSKMMGSTAGSVSGASGTGSGDEGEYYHNFNPIRTRGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQASFYQAGAATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGVDGQSTTLDWVHGLQPDDLEKFLAEKKDQRMRVLCLDLEPTGIPQQALRDNDEVVRAANSLQSESSPTSSAQMEPPFHGADNEVSGS 2829
            PVVAP TAS  VTNAPV+AAQPVAPGT   XXXXX   X        ATAPTAL                    SA IGQ PTVDPIAVVPSPPXXXXXXXXXXXXXXXXXX  TIT SPAAVPGAPTAEPALAP        TAAPAARDLPI GIPTPAPIAGGTARPAAPIVAPVVPGAPTL+ T APVDPADIPKTPAPVLP  XXXXXXXX    XXXXXXXXXXXXXXXXX   ATPAPSTNAPSVSG LTM+ AA+EQCEDGCEVGLANAFDVQPYLVRCSCPEVE++RRSLGGWLTEGWNST+VSPTEGSYYLRRRLEETSDAGFVVTVPGTTTSGLIQSINYFQNNFDRVSEAL VDSE+VQFSSLQFSATSFSPITEEASN+DVQLVVNPP SDASAAAVGMFVLFLVALLLGTCGCLWAILGFCR QRMRAKEASRKDFFSSKMMGS AGSVSGASGTGSGDEGEYYHNFNPIRT GMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQA       ATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIR KCPQWHEGNVQLMGV LAITFLEYG NSQTLGVD QSTTLDWVHGLQPDDLEKFLAEKKDQRMRVLCLDLEPTGIPQQALRDNDEV+RAANSLQSESSPTSSAQME PF GAD+E   S
Sbjct:  646 PVVAP-TASAAVTNAPVDAAQPVAPGTIPPXXXXXTVPX--------ATAPTALXXXXXXXXXXXXXXXXXXXXSAAIGQDPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXTTTITNSPAAVPGAPTAEPALAPXXXXXXXXTAAPAARDLPITGIPTPAPIAGGTARPAAPIVAPVVPGAPTLSGTTAPVDPADIPKTPAPVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPAPSTNAPSVSGALTMSLAAMEQCEDGCEVGLANAFDVQPYLVRCSCPEVEISRRSLGGWLTEGWNSTTVSPTEGSYYLRRRLEETSDAGFVVTVPGTTTSGLIQSINYFQNNFDRVSEALGVDSENVQFSSLQFSATSFSPITEEASNNDVQLVVNPPASDASAAAVGMFVLFLVALLLGTCGCLWAILGFCR-QRMRAKEASRKDFFSSKMMGSAAGSVSGASGTGSGDEGEYYHNFNPIRTGGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEATPPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQA-------ATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRGKCPQWHEGNVQLMGVSLAITFLEYGFNSQTLGVDAQSTTLDWVHGLQPDDLEKFLAEKKDQRMRVLCLDLEPTGIPQQALRDNDEVIRAANSLQSESSPTSSAQMELPFQGADDETPSS 1446
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BLAST of mRNA_Ecto-sp13_S_contig9936.21583.1 vs. uniprot
Match: D7G150_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G150_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 2.710e-52
Identity = 147/349 (42.12%), Postives = 179/349 (51.29%), Query Frame = 1 
Query:  898 VAPVVPGAP---------TLATTRAPVDPADIPKTPAPVLPPDXXXXXXXXATQPXXXXXXXXXXXXXXXXXVPVATPAP------------STNAPSVSGVLTMTEAAVEQCEDGCEVGLANAFDVQPYLVRCSCPEVEVTRRSLGGWLTEGWNSTSVSPTEGSYYLRRRLEETSDAGFVVTVPGTTTSGLIQSINYFQNNFDRVSEALSVDSEDVQFSSLQFSATSFSPITEEASNSDVQLVVNPPESDASAAAVGMFVLFLVALLLGTCGCLWAILGFCRRQRMRAKEASRKDFFSSKMMGSTAGSVSGASGTGSGDEGEYYHNFNPIRTRGMLAPHGKAIAPASI 1881
            +APVVPG           T      PVDP D  KTPAPVLPP                               PV T AP            S  APSVSG + ++E A+ QCE GC  GLA AFD+QPY V+C CPEV   RRSL   L    N TSV P+EG+Y  RRRL  T++  +VVTVPG TT G++QSIN+FQ N+  VS +L V  ++V FS+L+F A S S I    SN DV L+VNPP S AS  A+GMF++ ++ALLLGTC CL A+L FC                                       G+Y   +  IR RGMLAPH +AI PAS+
Sbjct:  199 MAPVVPGXXXXXXXXXXXTARPANTPVDPVDTFKTPAPVLPP---------------------VLVPTRTPITPVTTAAPLPXXXXXXXXXXSAQAPSVSGFIIVSETALAQCEVGCVEGLAAAFDLQPYRVQCICPEVR--RRSLRSMLANRRNVTSVHPSEGAYLSRRRLT-TAEVPYVVTVPGITTQGMVQSINHFQANYMEVSSSLGVPGDEVVFSTLEFVAASSSHI----SNMDVPLLVNPPASGASTNAIGMFIICILALLLGTCVCLEAVLNFC---------------------------------------GKYCSTYL-IRARGMLAPHHRAIVPASM 479
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BLAST of mRNA_Ecto-sp13_S_contig9936.21583.1 vs. uniprot
Match: A0A0G4EB06_VITBC (Methyltransf_11 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EB06_VITBC)

HSP 1 Score: 77.0 bits (188), Expect = 9.010e-11
Identity = 57/233 (24.46%), Postives = 106/233 (45.49%), Query Frame = 1 
Query: 1963 DPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHAILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALETAVVYTEAEEEAEFWQGLQASFYQAGAATDSLSRYDQIIVTARIVLMFDGSSGQSAAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGLNSQTLGVDGQSTTLDWVHGLQPDDLEKFLAEKKDQRM 2661
            DP Y  M+G L  +    +   +      RL  +F +A    E+ + +D++  +P IY +L+           ++ LA+ LAP W N+E  + AL   +      ++  FW  L       G  +D +S  D++I  A IV  F G     A +++ + +      +++ +C +W + +VQL+ V LAIT      +  T    G++    W+      +L+  L +++D +M
Sbjct:  336 DP-YEAMMGQL--WTARELEDAERQLVVARLTRDFNRADTESEQESFVDAVKGVPSIYRVLKEMNPVTFPPPLRAKLASLLAPQWKNTEAQQSALRQGLGLEPPSKD--FWLKL-------GQLSDDVSAEDRLIWLADIVPQFTGEPTHDAYVKQMIDVVPLAIDLVKERCQEWSDADVQLVAVDLAIT------DYMTEPPRGRARFYPWLKNFSRGELDDILRKRRDYKM 550
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9936.21583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KYK9_9PHAE0.000e+090.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG77_ECTSI0.000e+088.26Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G150_ECTSI2.710e-5242.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0G4EB06_VITBC9.010e-1124.46Methyltransf_11 domain-containing protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9936contigEcto-sp13_S_contig9936:77..5836 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score1231.5
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LG77
Model size2835
Hectar predicted targeting categoryother localisation
Exons12
EggNOG OGs2D0P0@1,2SEV1@2759
Cds size2835
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9936.21583.1prot_Ecto-sp13_S_contig9936.21583.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9936 77..5836 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464253.9938931-CDS-Ecto-sp13_S_contig9936:76..2051681464253.9938931-CDS-Ecto-sp13_S_contig9936:76..205Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9936 77..205 -
1681464254.0072038-CDS-Ecto-sp13_S_contig9936:616..7401681464254.0072038-CDS-Ecto-sp13_S_contig9936:616..740Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9936 617..740 -
1681464254.0164142-CDS-Ecto-sp13_S_contig9936:954..12081681464254.0164142-CDS-Ecto-sp13_S_contig9936:954..1208Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9936 955..1208 -
1681464254.0256581-CDS-Ecto-sp13_S_contig9936:1425..16351681464254.0256581-CDS-Ecto-sp13_S_contig9936:1425..1635Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9936 1426..1635 -
1681464254.035152-CDS-Ecto-sp13_S_contig9936:1851..20551681464254.035152-CDS-Ecto-sp13_S_contig9936:1851..2055Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9936 1852..2055 -
1681464254.044474-CDS-Ecto-sp13_S_contig9936:2234..24661681464254.044474-CDS-Ecto-sp13_S_contig9936:2234..2466Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9936 2235..2466 -
1681464254.0541008-CDS-Ecto-sp13_S_contig9936:2638..28381681464254.0541008-CDS-Ecto-sp13_S_contig9936:2638..2838Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9936 2639..2838 -
1681464254.063506-CDS-Ecto-sp13_S_contig9936:3078..32371681464254.063506-CDS-Ecto-sp13_S_contig9936:3078..3237Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9936 3079..3237 -
1681464254.073278-CDS-Ecto-sp13_S_contig9936:3533..36291681464254.073278-CDS-Ecto-sp13_S_contig9936:3533..3629Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9936 3534..3629 -
1681464254.0834239-CDS-Ecto-sp13_S_contig9936:3803..44441681464254.0834239-CDS-Ecto-sp13_S_contig9936:3803..4444Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9936 3804..4444 -
1681464254.0933964-CDS-Ecto-sp13_S_contig9936:4804..48531681464254.0933964-CDS-Ecto-sp13_S_contig9936:4804..4853Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9936 4805..4853 -
1681464254.1026685-CDS-Ecto-sp13_S_contig9936:5299..58361681464254.1026685-CDS-Ecto-sp13_S_contig9936:5299..5836Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9936 5300..5836 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9936.21583.1

>prot_Ecto-sp13_S_contig9936.21583.1 ID=prot_Ecto-sp13_S_contig9936.21583.1|Name=mRNA_Ecto-sp13_S_contig9936.21583.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=945bp
APPATGTAQPVTAPTPTATAPPATGTTQPVTAPTPTATAPPATGTTQPVT
APTPTVTTPPATGTTPPATTPTQPVTAPPVTGTTPPASAPTPVSETPAVA
PTPVIPTLLPVATPPEPPASSDSLQPVVAPPTASGTVTNAPVNAAQPVAP
GTAQPVATGTAQPVAPGTTVPPATAPTALAPSAEPVIGVQPSVPPVAAPS
ATIGQGPTVDPIAVVPSPPPAAVVPSPPPAPVVGAPPTATITTSPAAVPG
APTAEPALAPVVPLLPGQTAAPAARDLPIAGIPTPAPIAGGTARPAAPIV
APVVPGAPTLATTRAPVDPADIPKTPAPVLPPDQLPPTPAPATQPTPAPL
APGSTRAPVPTPVPVATPAPSTNAPSVSGVLTMTEAAVEQCEDGCEVGLA
NAFDVQPYLVRCSCPEVEVTRRSLGGWLTEGWNSTSVSPTEGSYYLRRRL
EETSDAGFVVTVPGTTTSGLIQSINYFQNNFDRVSEALSVDSEDVQFSSL
QFSATSFSPITEEASNSDVQLVVNPPESDASAAAVGMFVLFLVALLLGTC
GCLWAILGFCRRQRMRAKEASRKDFFSSKMMGSTAGSVSGASGTGSGDEG
EYYHNFNPIRTRGMLAPHGKAIAPASIKAVSPTPSQTKQTELFTNLMEAT
PPRGDPIYTEMIGTLGLFGTFYMSKEDMDFCAMRLYSNFKQAQENMERHA
ILDSIDVMPEIYDILRHCEDSHLTADEKSLLATQLAPHWTNSEEARRALE
TAVVYTEAEEEAEFWQGLQASFYQAGAATDSLSRYDQIIVTARIVLMFDG
SSGQSAAIREAVPLFQQVYKIIRAKCPQWHEGNVQLMGVYLAITFLEYGL
NSQTLGVDGQSTTLDWVHGLQPDDLEKFLAEKKDQRMRVLCLDLEPTGIP
QQALRDNDEVVRAANSLQSESSPTSSAQMEPPFHGADNEVSGSL*
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mRNA from alignment at Ecto-sp13_S_contig9936:77..5836-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9936.21583.1 ID=mRNA_Ecto-sp13_S_contig9936.21583.1|Name=mRNA_Ecto-sp13_S_contig9936.21583.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5760bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9936:77..5836- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGCCCCCTGCCACGGGGACAGCGCAGCCGGTCACCGCACCAACCCCGAC
AGCAACCGCGCCCCCTGCCACGGGGACAACACAGCCGGTCACGGCACCAA
CCCCGACAGCAACCGCGCCCCCTGCCACGGGGACAACACAGCCGGTCACG
GCACCGACGCCAACCGTTACCACCCCTCCCGCCACTGGGACAACGCCACC
GGCTACGACGCCAACTCAACCAGTAACCGCCCCCCCCGTTACGGGAACGA
CGCCACCGGCTTCGGCACCAACGCCTGTATCCGAAACCCCCGCTGTTGCC
CCGACCCCAGTAATCCCGACCCTGTTGCCTGTCGCAACACCTCCTGAACC
TCCCGCTTCTTCCGATTCGCTGCAGCCTGTTGTGGCGCCACCTACAGCTT
CTGGGACGGTGACCAATGCGCCTGTGAATGCGGCCCAGCCAGTGGCACCG
GGGACGGCCCAGCCAGTGGCAACGGGGACGGCCCAGCCAGTGGCACCGGG
GACGACGGTTCCCCCTGCCACGGCTCCGACCGCACTGGTGTGTGTGTGTG
TGTTTTTGTTTACACTGTTCCTTTGATTTCTAACGAGGGGTGCCGCCTTG
TGTTGGTTTATTCGTCTGTGACCCGTACGCATGTCTGAAGACACTGAGCG
GAGACCATTTGTTTACCGTGCGGACAACAACGCTGTCGAGTTTCGATCGT
GTTGGTTTTTGTCCCGAAAGAAATTCGTGGCTCTGGTGACGGTGTCGGGT
GTGTTGTGTTTTGTTTAGTTAGTTTGGTTTGGTTTGTGCGAGGTGCGCCG
ACACTGAGCACGATACGCACGGATACGATGACGTTGGGTTTGTATCATGA
CCTTGTTGGTTTGTTGCTGCACGACTAGATTGTGGCAGGAACTCAGGTAC
GGGATCTCTGTCGTTTACCTCAGATGTCTCGCACCGCCCTGGTGCTGCGC
AATTCTGTATGTTTTTCGGCTGTATTGTTCCAGGCGCCGAGTGCTGAGCC
TGTGATTGGGGTACAGCCGAGCGTCCCTCCAGGTAAGCAGGAGGAAGAAG
GGTGTCATCGCTCGTTTGTTTTTTTTCACGTCTCGCTTCTCTCTCATGAA
CGCTTGGTATGCATCGTGCTTTTCTTGGACGCTCTCTGCGAAAAGGCAAC
TTCAAGCGCACGCATGGTCCATGGCGCGTGGTGTTTAACATTTGCTTACA
TCGGTCGCCACATCCGTTCCACCGCTATCTATTGAGTAGGCCGCTGCGTC
GGTCTTGAGTAGGCCGCTGCGTCCGTCGCCACCCCTTCTGTGCTAGCGTT
CTATCTTGGTAACGACAAGTCTGCCGGCTCCCGAGAAGATTTTGACTTGT
GTTTTTTCCCGCCCCTGTCCGTCGCCTCCCGCCCGCTCGAAGTTGCCGCT
CCCTCAGCAACAATTGGACAGGGCCCTACCGTAGACCCGATAGCCGTGGT
GCCTTCGCCGCCACCGGCGGCCGTAGTTCCCTCGCCCCCGCCGGCCCCTG
TGGTCGGCGCGCCGCCTACGGCTACGATTACCACATCGCCCGCCGCGGTG
CCAGGGGCGCCCACGGCCGAGCCGGCGCTAGCCCCGGTGGTCCCCCTGCT
CCCCGGACAGACCGCCGCCCCCGCTGCCAGAGACCTGCCCATCGCCGGCA
TCCCGACGCCGGCCCCGATCGCCGGCGGCACAGCCCGCCCGGCCGCTCCC
ATCGTGGCGCCGGTGGTCCCCGGCGCCCCGACGTTAGCCACCACCAGGGC
GCCCGTCGACCCGGCTGATATCCCCAAGACGCCGGCGCCGGTGCTACCGC
CGGACCAGCTGCCGCCAACGCCGGCGCCCGCGACGCAGCCGACGCCGGCG
CCGCTGGCCCCGGGGAGCACGCGAGCTCCGGTGCCGACTCCGGTGCCGGT
GGCCACGCCCGCGCCTTCGACGAATGCCCCGAGCGTGAGCGGGGTGCTGA
CAATGACGGAGGCGGCGGTGGAGCAGTGCGAGGACGGGTGCGAGGTCGGG
CTCGCCAACGCTTTCGATGTTCAGCCTTACCTGGTGAGTTTTGGCAGGAA
GTAGAATGGTCTCGGGTGACGTAGTTCTATTCCACGTGCTTGCGGCATCG
AAGTGTACTCTATGGCCCCGTAAGGGGGATTTGTCGGGGGCCTTGACAAC
ATGTCGGCGGAACCAAACGCGGTGTCTTCCCGATGACTGCCGTTCAATTG
CACGCAGGTTCGATGTAGCTGCCCCGAAGTCGAAGTCACCCGGAGGTCCT
TGGGAGGCTGGCTGACGGAAGGGTGGAACTCGACGAGCGTGAGCCCAACA
GAGGTGAGTTTAGAGAGGCCGCCAGGGTAAGTTGCCTTCCCGGCTGTTGT
CTGCGCAGTGGTTGTTTCGTGACCGATATCGCCCCCTTTGAGAAGGTTAC
CGTGGCGTTGTCCTTATGGGTCGTGATGTTACGACGGCTTCTTTTGCACG
GGACAGGGGGGGGGGGGGCAGGTCTCATGCGCAATCCTTCTTCCGGTACA
TCGCTGTGATAAATCGTGCACAGCGATTGGGCACATATCGTTCTCCTCTT
GTTCATTCGGCGTCTCTGATTTTTTTTTCGCTCATCGGACACCACGCAGG
GCTCCTACTACCTGCGGAGGCGTCTTGAAGAAACCAGCGACGCAGGTTTC
GTGGTGACCGTGCCGGGAACCACCACCTCGGGCCTTATCCAGTCCATCAA
CTACTTCCAGAACAACTTCGATCGTGTTTCGGAAGCGCTGAGCGTGGACT
CGGAGGACGTGAGTTTTCTTTCGTTGTTTTTGGTCTCTCGAGAAGACTCT
TTGTGTCTGATATGGGTCCTCCGTGTACATGGTACATGGGTCAGTTTGTT
GTTCACAGAGATGTGCACATTTATGTGTCCCCTCTCTTTGGAGTCTTAAC
GTGGATACCAGTTCGTTGAACAGGTCTTTCACACACCCCTCCTCCCCCCC
AAACCCACCTTTTCGGGTCCTCGCACGCGGGGTGTTACCCGCAAGCAGGT
CCAGTTCTCGTCTCTCCAGTTCAGCGCGACTTCCTTCTCGCCCATCACCG
AGGAGGCCAGCAACAGCGACGTGCAGCTGGTCGTAAACCCCCCCGAGTCG
GACGCGTCGGCTGCCGCCGTGGGGATGTTCGTGCTGTTCCTGGTGGCTCT
TCTACTCGGCACCTGCGGGTGCCTGTGGGCCATCTTGGGCTTCTGCAGGT
GTGTGTCGTTTGTCGTTAGTTTGCGTTGACCGCGCTAACCGGCTGACCAG
TTGAAGACACGTCAGTGCGGGTGTGGCCCTTGCGATACTCACACACACAC
ACACACACACCCCCCCCCCGCTCCGGTATACACCCATGTGCCTGGCATGC
ATCTTTTGGTTTCTTGCGAGAAGGCAACGGATGAGGGCGAAGGAGGCCTC
CCGAAAGGACTTCTTCTCGTCCAAGATGATGGGCTCCACCGCCGGCTCAG
TGTCAGGTGCCTCGGGTACCGGGTCCGGAGACGAGGGCGAGTACTACCAC
AACTTCAACCCCATCCGCACGAGAGGAATGCTGGCGCCCCACGGGAAGGC
TATCGCGCCAGCCTCGATCAAGGCGGTCTCTCCGACCCCCTCTCAGACGA
AGGTTTGTCGATGTTACCGTAGTCAACTGATCTACTTTCTCTTGAGTGGG
TAGATACCTGTAAGTCGAAGACAAAAGTATCGATGGATTTAAGCTTTTGT
TACTTTGTATGGGTACCTTTTCTTTCTTGCGCGTTTGCGCCCAACTCACT
CTGTGTTTCTTTCTCTCTCTATCCCTTTCAGCAAACGGAGCTTTTCACGA
ACCTGATGGAAGCTACACCGCCCCGGGGCGACCCCATCTACACGGAGATG
ATCGGAACCCTGGGACTTTTCGGTACCTTCTATATGTCCAAGGAAGACAT
GGACTTCTGCGCCATGCGGCTGTACAGCAACTTCAAGCAAGCCCAGGAGA
ACATGGAACGCCACGCTATCCTGGACTCAATCGATGTAAGTATATAGACC
AAGAGACTGTAAGAGACGGCACCGTTTTGTTTTGTGTTGTTTTTTTGCGT
CTTTCTCCCACGGAACCATTTTGGGGGGTTGTCCGTCACATTAGGGGGTG
GGGTTCCGGTGTTCCAATATAAGCAGCGCCCGTGTATGCTGGTCGACCTC
CAATGTCACCAACGTCATCTCTCTCTCGCGCATGTCTGTGTGTGCGTTCA
GGTCATGCCCGAGATCTACGATATCCTGCGACACTGCGAGGACAGCCACT
TGACGGCGGACGAGAAGTCTCTGCTCGCTACGCAGCTGGCGCCGCACTGG
ACGAACTCGGAGGAAGCGAGGCGGGCGCTGGAAACTGCGGTTGTGTACAC
GGAGGCCGAGGAGGAGGCGGAGTTCTGGCAGGGTTTGCAGGCAAGTTTTT
ACCAAGCGGGGGTTTATTATGTCATTGGTACGTGCGCCATCTTGTCCCGT
TTCGTTTTTCGGTCGCCTTCCCACTGCTGTGAACCAAAACCCTGACCTGC
GACCGGCGGGCACGCTCCCTTGCGTTTGTAGTTTTTCGAACAACCATCGT
TCGGCCGTGGCTCTTGTGCTGCTGCCTCCATGACTGGTGAACGTTTTATC
ATTTGTTCTTTTTTTTTCGTGTGCACAGGCTGCAACCGACTCCCTGTCGA
GGTACGACCAGATCATCGTGACGGCCCGAATCGTCCTCATGTTCGACGGC
AGCAGCGGGCAGTCGGCGGCCATCCGCGAGGCCGTTCCCCTGTTCCAGCA
GGTGTACAAGATCATCCGGGCCAAGTGCCCGCAGTGGCACGAGGGGAATG
TGCAGCTGATGGGGGTGTACCTGGCCATCACGTTCCTCGAGTACGGGCTC
AACTCGCAGACGCTGGGGGTCGATGGCCAGAGGTGAGGGCGGGGGGGGAG
ATTCATGTGGACCCATGTGGGACCCGCATCATACAAGCAGTGCGGCAGTG
TTTCGCTCCTAACATTGCAACATGCAAGTGTACCGATTGACCTTGACCGC
AATGTTACATCAAGCCCTCGTTTATTTGCTGAACGTGGCTGATCTGATAA
TTTATGATGTGTCGTGCTTCCTACCGTCGAAAATGTACGACATCAGCACG
ACCCTGGACTGGGTCCACGGGCTTCAGCCGGACGACCTGGAGAAGTTCTT
GGCCGAGAAAAAGGACCAGCGCATGAGAGTCCTGTGTCTCGACCTCGAGC
CCACTGGTATCCCCCAGCAGGTGTGCGTGTGTATGTGTGTGTGCTTGTGT
TTTGGTGTTTGGTTGATTTGAATTACACTCGTGGCTCCGACATATGGGAG
GACGGTGTGACAAAGGCCCTCAACCCTCGTTTATCGGGGCCCCCTCTTTT
TCCAGAGTATGAGGGTACCCTAGCATGCTTTCGTGGGTCAGGTCCGTGAC
AACCGATTTCAACCGTCTTGCATCGTAGCCATCATTGTAGCATTTCGTCG
TGTAGATTTGATGTTGGACCGGTCCAGCCGGCTGAGCACCGGACATTGAC
GCCTCATCAGTGTTTTGTCACCTCAAGGCTAGTGTAGAAATTAAAAGTTT
CTTGTTGGCCGACTTGCCTGGCTCGATTGACCATCATTCCGACCTCTTCT
CCTTGCCTTTGTTGTTGCTAAATGCTGGCAGGCCTTGCGAGACAACGACG
AGGTGGTTAGAGCTGCAAACTCTTTGCAATCAGAGTCGTCGCCGACCAGT
TCGGCGCAAATGGAACCCCCCTTCCACGGAGCGGATAACGAGGTGAGTGG
TTCGTTGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9936:77..5836-

>mRNA_Ecto-sp13_S_contig9936.21583.1 ID=mRNA_Ecto-sp13_S_contig9936.21583.1|Name=mRNA_Ecto-sp13_S_contig9936.21583.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2835bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9936:77..5836- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGCCCCCTGCCACGGGGACAGCGCAGCCGGTCACCGCACCAACCCCGAC
AGCAACCGCGCCCCCTGCCACGGGGACAACACAGCCGGTCACGGCACCAA
CCCCGACAGCAACCGCGCCCCCTGCCACGGGGACAACACAGCCGGTCACG
GCACCGACGCCAACCGTTACCACCCCTCCCGCCACTGGGACAACGCCACC
GGCTACGACGCCAACTCAACCAGTAACCGCCCCCCCCGTTACGGGAACGA
CGCCACCGGCTTCGGCACCAACGCCTGTATCCGAAACCCCCGCTGTTGCC
CCGACCCCAGTAATCCCGACCCTGTTGCCTGTCGCAACACCTCCTGAACC
TCCCGCTTCTTCCGATTCGCTGCAGCCTGTTGTGGCGCCACCTACAGCTT
CTGGGACGGTGACCAATGCGCCTGTGAATGCGGCCCAGCCAGTGGCACCG
GGGACGGCCCAGCCAGTGGCAACGGGGACGGCCCAGCCAGTGGCACCGGG
GACGACGGTTCCCCCTGCCACGGCTCCGACCGCACTGGCGCCGAGTGCTG
AGCCTGTGATTGGGGTACAGCCGAGCGTCCCTCCAGTTGCCGCTCCCTCA
GCAACAATTGGACAGGGCCCTACCGTAGACCCGATAGCCGTGGTGCCTTC
GCCGCCACCGGCGGCCGTAGTTCCCTCGCCCCCGCCGGCCCCTGTGGTCG
GCGCGCCGCCTACGGCTACGATTACCACATCGCCCGCCGCGGTGCCAGGG
GCGCCCACGGCCGAGCCGGCGCTAGCCCCGGTGGTCCCCCTGCTCCCCGG
ACAGACCGCCGCCCCCGCTGCCAGAGACCTGCCCATCGCCGGCATCCCGA
CGCCGGCCCCGATCGCCGGCGGCACAGCCCGCCCGGCCGCTCCCATCGTG
GCGCCGGTGGTCCCCGGCGCCCCGACGTTAGCCACCACCAGGGCGCCCGT
CGACCCGGCTGATATCCCCAAGACGCCGGCGCCGGTGCTACCGCCGGACC
AGCTGCCGCCAACGCCGGCGCCCGCGACGCAGCCGACGCCGGCGCCGCTG
GCCCCGGGGAGCACGCGAGCTCCGGTGCCGACTCCGGTGCCGGTGGCCAC
GCCCGCGCCTTCGACGAATGCCCCGAGCGTGAGCGGGGTGCTGACAATGA
CGGAGGCGGCGGTGGAGCAGTGCGAGGACGGGTGCGAGGTCGGGCTCGCC
AACGCTTTCGATGTTCAGCCTTACCTGGTTCGATGTAGCTGCCCCGAAGT
CGAAGTCACCCGGAGGTCCTTGGGAGGCTGGCTGACGGAAGGGTGGAACT
CGACGAGCGTGAGCCCAACAGAGGGCTCCTACTACCTGCGGAGGCGTCTT
GAAGAAACCAGCGACGCAGGTTTCGTGGTGACCGTGCCGGGAACCACCAC
CTCGGGCCTTATCCAGTCCATCAACTACTTCCAGAACAACTTCGATCGTG
TTTCGGAAGCGCTGAGCGTGGACTCGGAGGACGTCCAGTTCTCGTCTCTC
CAGTTCAGCGCGACTTCCTTCTCGCCCATCACCGAGGAGGCCAGCAACAG
CGACGTGCAGCTGGTCGTAAACCCCCCCGAGTCGGACGCGTCGGCTGCCG
CCGTGGGGATGTTCGTGCTGTTCCTGGTGGCTCTTCTACTCGGCACCTGC
GGGTGCCTGTGGGCCATCTTGGGCTTCTGCAGAAGGCAACGGATGAGGGC
GAAGGAGGCCTCCCGAAAGGACTTCTTCTCGTCCAAGATGATGGGCTCCA
CCGCCGGCTCAGTGTCAGGTGCCTCGGGTACCGGGTCCGGAGACGAGGGC
GAGTACTACCACAACTTCAACCCCATCCGCACGAGAGGAATGCTGGCGCC
CCACGGGAAGGCTATCGCGCCAGCCTCGATCAAGGCGGTCTCTCCGACCC
CCTCTCAGACGAAGCAAACGGAGCTTTTCACGAACCTGATGGAAGCTACA
CCGCCCCGGGGCGACCCCATCTACACGGAGATGATCGGAACCCTGGGACT
TTTCGGTACCTTCTATATGTCCAAGGAAGACATGGACTTCTGCGCCATGC
GGCTGTACAGCAACTTCAAGCAAGCCCAGGAGAACATGGAACGCCACGCT
ATCCTGGACTCAATCGATGTCATGCCCGAGATCTACGATATCCTGCGACA
CTGCGAGGACAGCCACTTGACGGCGGACGAGAAGTCTCTGCTCGCTACGC
AGCTGGCGCCGCACTGGACGAACTCGGAGGAAGCGAGGCGGGCGCTGGAA
ACTGCGGTTGTGTACACGGAGGCCGAGGAGGAGGCGGAGTTCTGGCAGGG
TTTGCAGGCAAGTTTTTACCAAGCGGGGGCTGCAACCGACTCCCTGTCGA
GGTACGACCAGATCATCGTGACGGCCCGAATCGTCCTCATGTTCGACGGC
AGCAGCGGGCAGTCGGCGGCCATCCGCGAGGCCGTTCCCCTGTTCCAGCA
GGTGTACAAGATCATCCGGGCCAAGTGCCCGCAGTGGCACGAGGGGAATG
TGCAGCTGATGGGGGTGTACCTGGCCATCACGTTCCTCGAGTACGGGCTC
AACTCGCAGACGCTGGGGGTCGATGGCCAGAGCACGACCCTGGACTGGGT
CCACGGGCTTCAGCCGGACGACCTGGAGAAGTTCTTGGCCGAGAAAAAGG
ACCAGCGCATGAGAGTCCTGTGTCTCGACCTCGAGCCCACTGGTATCCCC
CAGCAGGCCTTGCGAGACAACGACGAGGTGGTTAGAGCTGCAAACTCTTT
GCAATCAGAGTCGTCGCCGACCAGTTCGGCGCAAATGGAACCCCCCTTCC
ACGGAGCGGATAACGAGGTGAGTGGTTCGTTGTAG
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