prot_Ecto-sp13_S_contig1261.2157.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1261.2157.1
Unique Nameprot_Ecto-sp13_S_contig1261.2157.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length191
Homology
BLAST of mRNA_Ecto-sp13_S_contig1261.2157.1 vs. uniprot
Match: A0A6H5JR22_9PHAE (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR22_9PHAE)

HSP 1 Score: 278 bits (712), Expect = 2.910e-93
Identity = 150/187 (80.21%), Postives = 152/187 (81.28%), Query Frame = 0
Query:    4 AAGRICGAASVAASRQCRLRRKVISAATAAMSPRTAVGSRFVRHASSATTLPDDDVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGGTVDMIVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSPGVDCYGGAGEGLRRATYQGYLNHKTPAE 190
            AAGR CGAASVA +R CRLRRKVISAA                            VLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYA GDAPVEGGTVDM+VELAECGFVGKLFVAEGDTVEVGQAVMAMCEE ENVRALSG TSPGVDCYGGAGEGLR ATYQGYLNHKTPAE
Sbjct:    3 AAGRFCGAASVAVNRHCRLRRKVISAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYALGDAPVEGGTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEVENVRALSGVTSPGVDCYGGAGEGLRIATYQGYLNHKTPAE 189          
BLAST of mRNA_Ecto-sp13_S_contig1261.2157.1 vs. uniprot
Match: D7FRP6_ECTSI (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP6_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 2.300e-78
Identity = 118/124 (95.16%), Postives = 119/124 (95.97%), Query Frame = 0
Query:   64 MPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGGTVDMIVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSPGVDCYGGAGEGLRRATYQGYLNHKT 187
            MPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEG TVDM+VELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSP VDCY GAGEG R ATYQGYLNHKT
Sbjct:    1 MPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGSTVDMVVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSPSVDCYSGAGEGFRIATYQGYLNHKT 124          
BLAST of mRNA_Ecto-sp13_S_contig1261.2157.1 vs. uniprot
Match: A0A836CE97_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE97_9STRA)

HSP 1 Score: 107 bits (266), Expect = 5.690e-26
Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 0
Query:   45 VRHASSATTLPDDDVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPG-DAPVEGGTVDMIVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGAT 160
            +R +S+A  +P D  L+LPMP+LSPSM   T+ KWL + GDE  EY+A L + TD+L A G   P   G+  M+VEL E GF+ KL   EG+TV VG+ +  +CEEE++V AL   T
Sbjct:   21 LRASSTAKGMPHD-TLWLPMPRLSPSMKTGTIKKWLLSPGDEFGEYEAALTIDTDTLVAEGLKTPESSGSTSMVVELLEAGFMAKLLRKEGETVRVGEPIALLCEEEDSVSALQSDT 136          
BLAST of mRNA_Ecto-sp13_S_contig1261.2157.1 vs. uniprot
Match: A0A8J9WR07_9CHLO (Probable dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WR07_9CHLO)

HSP 1 Score: 79.7 bits (195), Expect = 3.520e-15
Identity = 46/109 (42.20%), Postives = 64/109 (58.72%), Query Frame = 0
Query:   58 DVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSL----YAPGDAPVEGGTVDMIVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSP 162
            +V+ +PMPKLSPSMT  T+++WLKA GDEI EYD I+E+ T  L    Y  G      G+V ++VE  E G +    V +G  V+VG  V  M E+ +++  L G   P
Sbjct:    7 NVIVVPMPKLSPSMTEGTISRWLKAPGDEIVEYDIIMEVDTQELTEAAYKVGKF---AGSVTLLVEAQEDGIMHSHLVPQGKQVKVGTPVALMAEQGQSLPDLDGYKPP 112          
BLAST of mRNA_Ecto-sp13_S_contig1261.2157.1 vs. uniprot
Match: A0A7S0IYL7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IYL7_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 3.430e-13
Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 0
Query:   36 PRTAVGSRFVRHASSATTLPDDDVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGGTVDMIVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENV 153
            PRT   S+ +RH  S     +     +PMP+LSPSM+R  + +W  + GD+I+ YD + ++STD L     +P    T  + VE  E G++ K+ VAEG        +  +CE EE+V
Sbjct:   11 PRTMPFSQQIRHFPSGCAHANVSYKLMPMPRLSPSMSRGVLERWHLSAGDQISTYDLVCDVSTDELLDEPSSP----TFVLEVESHEDGWLAKVLVAEGGAAAPDMPIAVICENEEDV 124          
BLAST of mRNA_Ecto-sp13_S_contig1261.2157.1 vs. uniprot
Match: A0A7S0YW53_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YW53_9CRYP)

HSP 1 Score: 67.0 bits (162), Expect = 5.590e-11
Identity = 41/124 (33.06%), Postives = 64/124 (51.61%), Query Frame = 0
Query:   62 LPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGGTVDMIVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSG-ATSPGVDCYGGAGE-GLRRATYQGYL 183
            +PMPKL+P M  A ++KWL  EGDE++  D + EL  + L        E     M++E  E GFV +L  AEG  V   + ++ +C++E +    +G     G     G+G+ G R   +Q Y+
Sbjct:    1 MPMPKLTPQMESAVLSKWLIKEGDEVSAGDLVCELEVEGLNP------ELPHATMLIETHEAGFVARLLEAEGSRVAADRGILVLCDDEASKDQFAGYERKDGPSPNSGSGDSGARVFCWQAYV 118          
BLAST of mRNA_Ecto-sp13_S_contig1261.2157.1 vs. uniprot
Match: A0A7S0L0Q4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L0Q4_9EUKA)

HSP 1 Score: 64.7 bits (156), Expect = 2.630e-10
Identity = 41/95 (43.16%), Postives = 58/95 (61.05%), Query Frame = 0
Query:   42 SRFVRHASSATTLPDDDVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGGTVDMIVELAECGFVGKLFVAEGDT 136
            SR    AS A+ LP   ++  PMP+LSPSMTR  + KWL A GD ++ YD + ++STD L    D P + GT  + +E  E G++ K  +AEGD+
Sbjct:   19 SRCSSSASRASFLPPHKLM--PMPRLSPSMTRGVLDKWLVAAGDAVSTYDLLCDVSTDELL---DEP-KSGTHVLEMESHEDGWLAKGLLAEGDS 107          
BLAST of mRNA_Ecto-sp13_S_contig1261.2157.1 vs. uniprot
Match: A0A2E3SNU1_9BACT (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2E3SNU1_9BACT)

HSP 1 Score: 67.8 bits (164), Expect = 6.170e-10
Identity = 43/99 (43.43%), Postives = 56/99 (56.57%), Query Frame = 0
Query:   64 MPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGGTVDMIVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRALSGATSP 162
            MPKL  S+  AT+TKWLK+EGD+I E DAI+E++TD + +   +PVEG  V             K   +EGD VEVG+ V+A  E E    A     SP
Sbjct:    8 MPKLGESIIEATITKWLKSEGDQIEEDDAIVEIATDKVDSEIPSPVEGKLV-------------KALFSEGDVVEVGK-VIAYIEVEGMETAEESQESP 92          
BLAST of mRNA_Ecto-sp13_S_contig1261.2157.1 vs. uniprot
Match: UPI001557D946 (2-oxo acid dehydrogenase subunit E2 n=2 Tax=unclassified Lentimicrobium TaxID=2677434 RepID=UPI001557D946)

HSP 1 Score: 67.8 bits (164), Expect = 6.270e-10
Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 0
Query:   64 MPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGGTVDMIVELAECGFVGKLFVAEGDTVEVGQ--AVMAMCEEEEN 152
            MPKL  S+  AT+TKWLK EGD ++E DAILE++TD + +   +PVEG  +  + E             EGD + VG+  A++AM  +EE+
Sbjct:    8 MPKLGESIIEATITKWLKVEGDSVDEDDAILEIATDKVDSEIPSPVEGKIIKTLYE-------------EGDVIAVGEVIAIIAMDGDEED 85          
BLAST of mRNA_Ecto-sp13_S_contig1261.2157.1 vs. uniprot
Match: A0A7C0VZ72_9BACT (Dihydrolipoyllysine-residue acetyltransferase (Fragment) n=1 Tax=Candidatus Atribacteria bacterium TaxID=2053509 RepID=A0A7C0VZ72_9BACT)

HSP 1 Score: 63.5 bits (153), Expect = 1.440e-9
Identity = 34/96 (35.42%), Postives = 52/96 (54.17%), Query Frame = 0
Query:   61 YLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDSLYAPGDAPVEGGTVDMIVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEEENVRAL 156
            Y+ MPKL  +M + TV +WLK EGD I E + +LE+ TD    P +AP  G              + K+ V EG+T+ V   +  + EE+E+++ L
Sbjct:    4 YIIMPKLGFNMDQGTVVRWLKKEGDAIEEREEVLEIETDKTVMPVEAPCSG-------------ILRKILVEEGETIAVTLPIGIIAEEKEDIQPL 86          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1261.2157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JR22_9PHAE2.910e-9380.21Lipoyl-binding domain-containing protein n=1 Tax=E... [more]
D7FRP6_ECTSI2.300e-7895.16Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A836CE97_9STRA5.690e-2647.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J9WR07_9CHLO3.520e-1542.20Probable dihydrolipoyllysine-residue acetyltransfe... [more]
A0A7S0IYL7_9EUKA3.430e-1335.59Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S0YW53_9CRYP5.590e-1133.06Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S0L0Q4_9EUKA2.630e-1043.16Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A2E3SNU1_9BACT6.170e-1043.43Dihydrolipoamide acetyltransferase component of py... [more]
UPI001557D9466.270e-1041.762-oxo acid dehydrogenase subunit E2 n=2 Tax=unclas... [more]
A0A7C0VZ72_9BACT1.440e-935.42Dihydrolipoyllysine-residue acetyltransferase (Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000089Biotin/lipoyl attachmentPFAMPF00364Biotin_lipoylcoord: 63..111
e-value: 1.9E-6
score: 27.6
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 59..148
score: 16.365
NoneNo IPR availableGENE3D2.40.50.100coord: 58..164
e-value: 6.2E-25
score: 88.9
NoneNo IPR availablePANTHERPTHR23151DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATEDcoord: 44..160
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 61..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1261contigEcto-sp13_S_contig1261:7585..9444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1261.2157.1mRNA_Ecto-sp13_S_contig1261.2157.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1261 7585..10051 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1261.2157.1 ID=prot_Ecto-sp13_S_contig1261.2157.1|Name=mRNA_Ecto-sp13_S_contig1261.2157.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp
MNAAAGRICGAASVAASRQCRLRRKVISAATAAMSPRTAVGSRFVRHASS
ATTLPDDDVLYLPMPKLSPSMTRATVTKWLKAEGDEINEYDAILELSTDS
LYAPGDAPVEGGTVDMIVELAECGFVGKLFVAEGDTVEVGQAVMAMCEEE
ENVRALSGATSPGVDCYGGAGEGLRRATYQGYLNHKTPAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000089Biotin_lipoyl
IPR011053Single_hybrid_motif