prot_Ecto-sp13_S_contig9921.21566.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9921.21566.1
Unique Nameprot_Ecto-sp13_S_contig9921.21566.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length480
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9921.21566.1 vs. uniprot
Match: D8LB68_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB68_ECTSI)

HSP 1 Score: 675 bits (1741), Expect = 2.090e-224
Identity = 409/472 (86.65%), Postives = 422/472 (89.41%), Query Frame = 0 
Query:    1 HDAVDQLSFLQNNPPIFVSNLVGALSASYAKPGDVLFYQDEVASDLYFLVTGKVNLFATFSAKVTAEKTFTDGFHCSTMGHTDLQANVIGEGSFAVQTFSFAKVFKDSRIGEAGVMLDVQQPIAAVAMAVCDMFTIGKENLLSALDGFVKVQASLIEDAEDFMRRLDEFKRRKGMEVVPEELDSEDTSGMGGITEKSDNARAGGXXXXXXXXXXXXXGVGFQRGVNMSTARDSDWRERKGVGGASTNAGKGNLPPEGTLPPLKRVSSMAKAXXXXXXXXXXGESVGPLSPAGAPPDAGAGGAELSPASPSPNDGHVRGAHVKIRVCNTIKLSPLVGLDGGLNEGSGMNDTGNXXXXXXXXXXXXXXXXXXXXDNFTGGLLVASVSECDSSAFGDEDSGRSGGGESEGSDTTDDEDDAEDELNGSKRHGTLYDPRPRVRSAVSQQYMELENTFASDVTMGGSPAHSSLVQRMA 472
            HDAVDQLSFLQNNPPIFVSNLVGALSASYAKPGDVLFYQ+EVASDLYFLVTGKVNLFATFSAKVTAEKTF+DGFH STMGH DL+ANV GEG FAVQTFSFAKVFKDSRIGE GVMLDVQQPIAAVAM+VCDMFTIGKENLLSALDGFVKVQASLIEDAE+FMRRLDEFK+RKGMEVVPEELDSEDT+ MG I EKSDNARAGGXXXXXXXXXXXXX    QR V +STARDSD RERKGVG A TNAG G  PPE TLPPLKRVSSMAKAXXXXXXXXXX ES GPLSP+GA PDAGAGG ELSPASPSPN  HVRGAHVK+RVCNTIKLSPLV LDGGLNEGSGMN TG+      XXXXXXXXXXX   DNFTGGLLVASVSECDS AFGDEDSG S   ESEGSD TDDEDD  DELNGSKRHG+LYD RPRVRSA SQQ MEL+NTFASDVTMGGSPAHSSL QRMA
Sbjct:  527 HDAVDQLSFLQNNPPIFVSNLVGALSASYAKPGDVLFYQEEVASDLYFLVTGKVNLFATFSAKVTAEKTFSDGFHRSTMGHGDLEANVTGEGPFAVQTFSFAKVFKDSRIGEVGVMLDVQQPIAAVAMSVCDMFTIGKENLLSALDGFVKVQASLIEDAENFMRRLDEFKKRKGMEVVPEELDSEDTNRMGLIAEKSDNARAGGXXXXXXXXXXXXXXXXAQRVVPLSTARDSDGRERKGVGSAGTNAGTGGPPPEATLPPLKRVSSMAKAXXXXXXXXXXXESGGPLSPSGALPDAGAGGFELSPASPSPNVRHVRGAHVKLRVCNTIKLSPLVRLDGGLNEGSGMNGTGDNDRGNGXXXXXXXXXXX---DNFTGGLLVASVSECDSGAFGDEDSG-SWREESEGSDITDDEDDEGDELNGSKRHGSLYDARPRVRSAASQQCMELQNTFASDVTMGGSPAHSSLAQRMA 994
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9921.21566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB68_ECTSI2.090e-22486.65Cyclic nucleotide-binding domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 3..172
e-value: 5.6E-13
score: 50.8
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 9..70
score: 9.031
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 4..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9921contigEcto-sp13_S_contig9921:410..5030 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9921.21566.1mRNA_Ecto-sp13_S_contig9921.21566.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9921 410..5030 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9921.21566.1 ID=prot_Ecto-sp13_S_contig9921.21566.1|Name=mRNA_Ecto-sp13_S_contig9921.21566.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=480bp
HDAVDQLSFLQNNPPIFVSNLVGALSASYAKPGDVLFYQDEVASDLYFLV
TGKVNLFATFSAKVTAEKTFTDGFHCSTMGHTDLQANVIGEGSFAVQTFS
FAKVFKDSRIGEAGVMLDVQQPIAAVAMAVCDMFTIGKENLLSALDGFVK
VQASLIEDAEDFMRRLDEFKRRKGMEVVPEELDSEDTSGMGGITEKSDNA
RAGGGGEGSGGGGGGAGGVGFQRGVNMSTARDSDWRERKGVGGASTNAGK
GNLPPEGTLPPLKRVSSMAKAAAAAAAAVGGGESVGPLSPAGAPPDAGAG
GAELSPASPSPNDGHVRGAHVKIRVCNTIKLSPLVGLDGGLNEGSGMNDT
GNNDRGNGGNTGGGGGGADGGGDNFTGGLLVASVSECDSSAFGDEDSGRS
GGGESEGSDTTDDEDDAEDELNGSKRHGTLYDPRPRVRSAVSQQYMELEN
TFASDVTMGGSPAHSSLVQRMAAVGSPEF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR000595cNMP-bd_dom
IPR018490cNMP-bd-like