mRNA_Ecto-sp13_S_contig12609.2156.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12609.2156.1 vs. uniprot
Match: D8LJQ3_ECTSI (Pho4 high affinity phosphate transporter, probable (IC) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ3_ECTSI) HSP 1 Score: 150 bits (380), Expect = 7.840e-46 Identity = 79/88 (89.77%), Postives = 83/88 (94.32%), Query Frame = 1
Query: 1 MSEALQPRILAPEASDHWLWIVVAGAFGSFLAASGIGANDVANAFATSVGARAVTLKQAIVLAGIFEFLGALLLGTHVTKAVRENIVN 264
MSEALQPR+LAPEASD WLWIVV GAFGSFLAA GIGANDVANAF+TSVGARAVTLKQAIVLAG+FEFLGALLLG VTKA+RENIVN
Sbjct: 1 MSEALQPRMLAPEASDQWLWIVVVGAFGSFLAAFGIGANDVANAFSTSVGARAVTLKQAIVLAGVFEFLGALLLGAPVTKAIRENIVN 88
BLAST of mRNA_Ecto-sp13_S_contig12609.2156.1 vs. uniprot
Match: A0A6H5JIN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN4_9PHAE) HSP 1 Score: 116 bits (291), Expect = 4.930e-32 Identity = 56/81 (69.14%), Postives = 70/81 (86.42%), Query Frame = 1
Query: 22 RILAPEASDHWLWIVVAGAFGSFLAASGIGANDVANAFATSVGARAVTLKQAIVLAGIFEFLGALLLGTHVTKAVRENIVN 264
RIL PE +D +LWI++ GAFG+F AA GIGANDVANAFATSVGA+A+T+KQA++LAGIFEFLGA+ LG+HVTK +R I +
Sbjct: 9 RILVPETTDQFLWILIVGAFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVILAGIFEFLGAVFLGSHVTKTIRSGIAD 89
BLAST of mRNA_Ecto-sp13_S_contig12609.2156.1 vs. uniprot
Match: D7G5U7_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U7_ECTSI) HSP 1 Score: 117 bits (294), Expect = 1.670e-31 Identity = 57/81 (70.37%), Postives = 72/81 (88.89%), Query Frame = 1
Query: 22 RILAPEASDHWLWIVVAGAFGSFLAASGIGANDVANAFATSVGARAVTLKQAIVLAGIFEFLGALLLGTHVTKAVRENIVN 264
RILAPEA+D +LWI++ AFG+F AA GIGANDVANAFATSVGA+A+T+KQA+VLAG+FEFLGA+ LG+HVTK +R+ I +
Sbjct: 34 RILAPEATDQFLWILIVAAFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVVLAGVFEFLGAVFLGSHVTKTIRKGIAD 114
BLAST of mRNA_Ecto-sp13_S_contig12609.2156.1 vs. uniprot
Match: D7G0K9_ECTSI (Phosphate transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI) HSP 1 Score: 122 bits (307), Expect = 5.360e-31 Identity = 60/81 (74.07%), Postives = 72/81 (88.89%), Query Frame = 1
Query: 22 RILAPEASDHWLWIVVAGAFGSFLAASGIGANDVANAFATSVGARAVTLKQAIVLAGIFEFLGALLLGTHVTKAVRENIVN 264
RILAPE +DH+LWIV+ GAFG+F AA GIGANDVANAFATSVGA+A+T+KQA+VLAGIFEFLGA+ LG+HVTK +R I +
Sbjct: 9 RILAPETTDHFLWIVIVGAFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVVLAGIFEFLGAVFLGSHVTKTIRSGIAD 89
BLAST of mRNA_Ecto-sp13_S_contig12609.2156.1 vs. uniprot
Match: A0A6H5JNE7_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE) HSP 1 Score: 116 bits (291), Expect = 9.660e-29 Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 1
Query: 1 MSEALQPRILAPEASDHWLWIVVAGAFGSFLAASGIGANDVANAFATSVGARAVTLKQAIVLAGIFEFLGALLLGTHVTKAVRENIVN 264
M + RILAPE +D WLWI++ +FG+F AA GIGANDVANAFATSVGA+A+T+KQA+VLA IFEF GA+ LG+HVTK +R+ I +
Sbjct: 1 MDGVFEERILAPETTDQWLWILIVASFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVVLAAIFEFAGAVFLGSHVTKTIRKGIAD 88
BLAST of mRNA_Ecto-sp13_S_contig12609.2156.1 vs. uniprot
Match: D7FZJ7_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI) HSP 1 Score: 108 bits (271), Expect = 6.200e-26 Identity = 53/77 (68.83%), Postives = 67/77 (87.01%), Query Frame = 1
Query: 22 RILAPEASDHWLWIVVAGAFGSFLAASGIGANDVANAFATSVGARAVTLKQAIVLAGIFEFLGALLLGTHVTKAVRE 252
RILAP+ ++ +LWI++ G FG+F AA GIGANDVANAFATSVGA+A+TL+QA+VLAGIFEFLGA+ LG+HVT +R
Sbjct: 9 RILAPDTTNGFLWILIVGTFGAFFAAFGIGANDVANAFATSVGAKALTLRQAVVLAGIFEFLGAVFLGSHVTSTIRS 85
BLAST of mRNA_Ecto-sp13_S_contig12609.2156.1 vs. uniprot
Match: D7FWT9_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI) HSP 1 Score: 105 bits (262), Expect = 1.160e-24 Identity = 52/84 (61.90%), Postives = 66/84 (78.57%), Query Frame = 1
Query: 13 LQPRILAPEASDHWLWIVVAGAFGSFLAASGIGANDVANAFATSVGARAVTLKQAIVLAGIFEFLGALLLGTHVTKAVRENIVN 264
L RILAP + +LWIV+ + G+ AA GIGAND+ANAFATSVGARA+T+KQA+VLAG+FEFLGA+ LG+HV K +R I +
Sbjct: 6 LDERILAPAVTSEFLWIVIVSSIGAVFAAFGIGANDLANAFATSVGARALTIKQAVVLAGVFEFLGAVFLGSHVAKTIRSGIAD 89
BLAST of mRNA_Ecto-sp13_S_contig12609.2156.1 vs. uniprot
Match: D8LJQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ0_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 2.820e-24 Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 1
Query: 16 QPRILAPEASDHWLWIVVAGAFGSFLAASGIGANDVANAFATSVGARAVTLKQAIVLAGIFEFLGALLLGTHVTKAVRENIVN 264
+ R+LAPEA+ WLWIV + G+ AA GIGANDVAN+FATSVG++A+TLK+A++LAGI EF GALLLG A+ E+I +
Sbjct: 7 EQRVLAPEATGQWLWIVSVASLGALCAALGIGANDVANSFATSVGSKALTLKKALLLAGICEFFGALLLGRQAMTAISESIAD 89
BLAST of mRNA_Ecto-sp13_S_contig12609.2156.1 vs. uniprot
Match: A0A6U1NDP7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NDP7_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.520e-22 Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 1
Query: 46 DHWLWIVVAGAFGSFLAASGIGANDVANAFATSVGARAVTLKQAIVLAGIFEFLGALLLGTHVTKAVRENIVN 264
D +LWIV+ G F + A GIGANDVANAF+TSVGA+ +TLKQA++L GIFEFLGA L G+HVTK +R+ I +
Sbjct: 7 DDYLWIVIVGGFLAVFTAYGIGANDVANAFSTSVGAKTLTLKQAVILGGIFEFLGAFLFGSHVTKTIRKGIAD 79
BLAST of mRNA_Ecto-sp13_S_contig12609.2156.1 vs. uniprot
Match: A0A7S2V1L4_9STRA (Phosphate transporter n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1L4_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 8.060e-21 Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 1
Query: 46 DHWLWIVVAGAFGSFLAASGIGANDVANAFATSVGARAVTLKQAIVLAGIFEFLGALLLGTHVTKAVRENIVN 264
D +LWIV+ G F + A GIGANDVANAF+TSVGA+ +TLKQA++L GIFEFLGA L G+HVTK +R+ I +
Sbjct: 7 DDYLWIVIVGGFLAVFTAYGIGANDVANAFSTSVGAKTLTLKQAVILGGIFEFLGAFLFGSHVTKTIRKGIAD 79 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12609.2156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12609.2156.1 >prot_Ecto-sp13_S_contig12609.2156.1 ID=prot_Ecto-sp13_S_contig12609.2156.1|Name=mRNA_Ecto-sp13_S_contig12609.2156.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=88bp MSEALQPRILAPEASDHWLWIVVAGAFGSFLAASGIGANDVANAFATSVGback to top mRNA from alignment at Ecto-sp13_S_contig12609:3651..4479+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12609.2156.1 ID=mRNA_Ecto-sp13_S_contig12609.2156.1|Name=mRNA_Ecto-sp13_S_contig12609.2156.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=829bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12609:3651..4479+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12609:3651..4479+ >mRNA_Ecto-sp13_S_contig12609.2156.1 ID=mRNA_Ecto-sp13_S_contig12609.2156.1|Name=mRNA_Ecto-sp13_S_contig12609.2156.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=264bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12609:3651..4479+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |