prot_Ecto-sp13_S_contig9894.21536.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9894.21536.1
Unique Nameprot_Ecto-sp13_S_contig9894.21536.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length668
Homology
BLAST of mRNA_Ecto-sp13_S_contig9894.21536.1 vs. uniprot
Match: A0A6H5JNJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ9_9PHAE)

HSP 1 Score: 1132 bits (2927), Expect = 0.000e+0
Identity = 619/651 (95.08%), Postives = 624/651 (95.85%), Query Frame = 0
Query:   18 EPAAQPPRLKDPSKEPLLLVGDLFTAPGPGEAEEGELRWEKEPGGVVSEQRGLEAAEHEARLLTCALPALRLLRHCLGRLSDAGAEPPVGPLDAVGALLDLEAALAMLPLDLPPSALPPGSDGKPSPSRGESWDLGATPSVALALRAEALVLSSCRLWCPPRPWSRLRRNSGGGGSSSFLHRVSAHALACPANHMSGARLLTALLPPESPAPLHRLVLPVATAAXXXXXXXXXXXXXXXXXDGGSVGRLVGRVHTAAALEQSEGLRRQAVAALERRVREMLEGWDVCVAGDLFPSKEAAAAEAGPDGDGGGAGEEGAGDKDGXXXFDRAGGGXXXXAGGWRPSLETNPVLAVTAPGVVNVPAVVLSLCHSASPVLHGRVLELARRAVGIGPMTARALCASLVRSLIGCIERYVGQSKPLDGRSDKDREVSWESVCRVLAVVLAVSDNPRSGAGRVGLLLGGAIEALMPCLGLPKPEVIRSALEVLCSFVEGARVSEVRRYSEPACSFGTLATAARNVVAKWHRVDLHVHAWGARLLATLAAQPSVAADALQALKPRGAEAAGVEAQEGKTTMLLPRLYAGLQKGLEDTGNRYKHRLSLLKGGRVSEQKGLDLDRRVLRLVRAACWAIQVPLALMEEGLVDAAVVAGVLSPK 668
            EPAAQPPRLKDPSKEPLLLVGDLFTAPGPGEAEEGELRWEKEPGGVVSEQRGLEAAEHEARLLTCALPALRLLRHCLGRLSDAGAEPPVGPLDAVGALLD EAALAMLPLDLPPS+LPPGSDGKPSPSR ESWD GATPSVALALRAEALVLSSCRLWCPPRPWSRLRRNSGGGGSSSFLHRVSAHALACPANHMSGARLLTALLPPESPAPLHRLVLPVATAAXXXXXXXXXXXXXXX  DGGSVGRLVGRVHTAAALE+SEGLRRQAVAALERRVREMLEGWDVCVAGDLFPSKEA AAEAGPDGDGGG           XXX       XXXX  GWRPSLETNPVLAVTAPGVVNVPAVVLSLCHSASPVLHGRVLELARRAV IGPMTARALCA+LVRSLIGCIERYVGQSKPLDGRSDKDREVSWESVCRVLAV+LAVSDNPRSGAGRVGLL+GGAIEALMPCLGLPKPEVIRSALEVLCSFVEGARVSEVRRYSEPACSFGTLATAARNVVAKWHRVDLHVHAWGARLLATLAAQPSVAADALQALKPRGAEAAGVEAQEGKTTMLLPRLYAGLQKGLEDTGNRYKHRLSLLKGGRVSEQKGLDLDRRVLRLVRAACWAIQVPLALMEEGLVDAAVVAGVLSPK
Sbjct: 1360 EPAAQPPRLKDPSKEPLLLVGDLFTAPGPGEAEEGELRWEKEPGGVVSEQRGLEAAEHEARLLTCALPALRLLRHCLGRLSDAGAEPPVGPLDAVGALLDFEAALAMLPLDLPPSSLPPGSDGKPSPSREESWDFGATPSVALALRAEALVLSSCRLWCPPRPWSRLRRNSGGGGSSSFLHRVSAHALACPANHMSGARLLTALLPPESPAPLHRLVLPVATAAXXXXXXXXXXXXXXXTSDGGSVGRLVGRVHTAAALEKSEGLRRQAVAALERRVREMLEGWDVCVAGDLFPSKEADAAEAGPDGDGGGXXXX----XXXXXXXXXXXXXXXXXXXGWRPSLETNPVLAVTAPGVVNVPAVVLSLCHSASPVLHGRVLELARRAVSIGPMTARALCAALVRSLIGCIERYVGQSKPLDGRSDKDREVSWESVCRVLAVILAVSDNPRSGAGRVGLLIGGAIEALMPCLGLPKPEVIRSALEVLCSFVEGARVSEVRRYSEPACSFGTLATAARNVVAKWHRVDLHVHAWGARLLATLAAQPSVAADALQALKPRGAEAAGVEAQEGKTTMLLPRLYAGLQKGLEDTGNRYKHRLSLLKGGRVSEQKGLDLDRRVLRLVRAACWAIQVPLALMEEGLVDAAVVAGVLSPK 2006          
BLAST of mRNA_Ecto-sp13_S_contig9894.21536.1 vs. uniprot
Match: D8LBI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI8_ECTSI)

HSP 1 Score: 1118 bits (2891), Expect = 0.000e+0
Identity = 612/650 (94.15%), Postives = 618/650 (95.08%), Query Frame = 0
Query:   20 AAQPPRLKDPSKEPLLLVGDLFTAPGPGEAEEGELRWEKEPGGVVSEQRGLEAAEHEARLLTCALPALRLLRHCLGRLSDAGAEPPVGPLDAVGALLDLEAALAMLPLDLPPSALPPGSDGKPSPSRGESWDLGATPSVALALRAEALVLSSCRLWCPPRPWSRLRRNSGGGGSS-SFLHRVSAHALACPANHMSGARLLTALLPPESPAPLHRLVLPVATAAXXXXXXXXXXXXXXXXXDGGSVGRLVGRVHTAAALEQSEGLRRQAVAALERRVREMLEGWDVCVAGDLFPSKEAAAAEAGPDGDGGGAGEEGAGDKDGXXXFDRAGGGXXXXAGGWRPSLETNPVLAVTAPGVVNVPAVVLSLCHSASPVLHGRVLELARRAVGIGPMTARALCASLVRSLIGCIERYVGQSKPLDGRSDKDREVSWESVCRVLAVVLAVSDNPRSGAGRVGLLLGGAIEALMPCLGLPKPEVIRSALEVLCSFVEGARVSEVRRYSEPACSFGTLATAARNVVAKWHRVDLHVHAWGARLLATLAAQPSVAADALQALKPRGAEAAGVEAQEGKTTMLLPRLYAGLQKGLEDTGNRYKHRLSLLKGGRVSEQKGLDLDRRVLRLVRAACWAIQVPLALMEEGLVDAAVVAGVLSPK 668
            AAQPPRLKDPSKEPLLLVGDLFTAPGPGEAEEGELRWE+EPGGVVSEQRGLEAAEHEARLLTCALPALRLLRHCLGRLSDAGAEPPVGPLDAVGALLD EAALAMLPLDLPPS+LPPGSD KPSPSRGESWDLGATPSVALALRAEALVLSSCRLWCPPRPWSRLRRN        SFLHRVSAHALACPANHMSGARLLTALLPPESPA LHRLVLPVATA XXXXXXXXXXXXXXXX DGGSVGRLVGRVHTAAALEQSEG RRQAVAALERRVREML+ WDVCVAGDLFP KEAAAAEAGPD DGGGAGEEG GDK G   FD    GXXXX   WRPSLETNPVLAVTAPGVVNVPAVVLSLCHSASPVLHGRVLELARRAVGIGPMTARALCASLVRSLIGCIERY+GQS+PLDGRSDKDREVSWESVCRVL V+LAVSDNP SGAGRVGLLLGG IEALMPCLGLPKPEVIRSALEVLCSFVEGARVSEVRRYSEPACSFGTLATAARNVVAKWHRVDLHVHAWGARLLATLAAQPSVAADALQALKPRGAEAAGVEAQEGKTTMLLPRLYAGLQKGLEDTGNRYKHRLSLLKGGRVSEQKGLDLDRRVLRLVRAACWAIQVPLALMEEGLVDAAVVAGVLSPK
Sbjct: 1278 AAQPPRLKDPSKEPLLLVGDLFTAPGPGEAEEGELRWEQEPGGVVSEQRGLEAAEHEARLLTCALPALRLLRHCLGRLSDAGAEPPVGPLDAVGALLDFEAALAMLPLDLPPSSLPPGSDVKPSPSRGESWDLGATPSVALALRAEALVLSSCRLWCPPRPWSRLRRNGXXXXXXXSFLHRVSAHALACPANHMSGARLLTALLPPESPAALHRLVLPVATAXXXXXXXXXXXXXXXXXSDGGSVGRLVGRVHTAAALEQSEGFRRQAVAALERRVREMLKRWDVCVAGDLFPLKEAAAAEAGPDVDGGGAGEEGTGDKSGNGAFD----GXXXXXXXWRPSLETNPVLAVTAPGVVNVPAVVLSLCHSASPVLHGRVLELARRAVGIGPMTARALCASLVRSLIGCIERYMGQSQPLDGRSDKDREVSWESVCRVLTVILAVSDNPHSGAGRVGLLLGGVIEALMPCLGLPKPEVIRSALEVLCSFVEGARVSEVRRYSEPACSFGTLATAARNVVAKWHRVDLHVHAWGARLLATLAAQPSVAADALQALKPRGAEAAGVEAQEGKTTMLLPRLYAGLQKGLEDTGNRYKHRLSLLKGGRVSEQKGLDLDRRVLRLVRAACWAIQVPLALMEEGLVDAAVVAGVLSPK 1923          
BLAST of mRNA_Ecto-sp13_S_contig9894.21536.1 vs. uniprot
Match: A0A835ZHG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHG1_9STRA)

HSP 1 Score: 311 bits (796), Expect = 9.640e-88
Identity = 256/708 (36.16%), Postives = 324/708 (45.76%), Query Frame = 0
Query:   37 VGDLFTAPGPGE-AEEGELRWEKEPGGVVS---EQRGLEAAEHEARLLTCALPALRLLRHCLGRLSDAGAEPPVGPLDAV-GALLDLEAALAMLPLDLPPS--ALPPGSDGKPSPSRGESWDLGATPSVALALRAEALVLSSCRLWCPPR------------------PWSRLRRNSGGGG---------------------------SSSFLHRVSAHALACPANHMSGARLLTALLPPESPAPLHRLVLPVATAAXXXXXXXXXXXXXXXXXDGGSVGRLVGRVHTAAALEQSEGLRRQAVAALERRVREMLEGWDVCVAGDLFPSKEAAAAEAGPDGDGGGAGEEGAGDKDGXXXFDRAGGGXXXXAGGWRPSLETNPVLAVTAPGVVNVPAVVLSLCHSASPVLHGRVLELARRAVGIGPMTARALCASLVRSLIGCIERYVG-----QSKPLDGRSDKDREVSWESVCRVLAVVLAVSDNPRSGAGRVGLLLGGAIEALMPCLGLPKPEVIRSALEVLCSFVEGA-RVSEVRRYSEPACSFGTLATAARNVVAKWHRVDLHVHAWGARLLATLAAQPSVAADALQALKPRGAEAAGVEAQEGKTTMLLPRLYAGLQKGLEDTGNRYKHRLSLLK-------------------GGRVSEQKGLDLDRRVLRLVRAACWAIQVPLALMEEGLVDAAVVAGVLSP 667
            V DL   PGP E A E E  W    G   +    +R   AA H  ++L   +  LRLLR  L R+   G +      DAV  A+LD +AA+A LPL    +   LP G                ATP+  LALRAE+L++  CRLW PP                            G                              ++S +  +  HALA PA+H+   RLL ALLPP  P PLHRL  P +                           L  RV  AAA+E+ +GLR  A+  +ER +   L  WD+     L P+  AA+  A                                  G            A  A    ++ A+  ++CHS+SP +     ++A RA G G  TAR + A+L+  L  C++ Y+                      W  VCR L  V A++D    GA RV LLL GA+ AL+PCLGLP+PE IR+AL  L  F  G+ R +E RR+  P  SFG +ATAARNV+ KWHRVDL VHA GA+LLA LAA PS AA  L AL+PRGAEAAG    EGKTTMLLPRLY+GL KGLED   +Y+ R +L                           ++G D+D RVL + RAACWA+  PLALM EGLVDAA VA VL P
Sbjct: 1124 VADLVW-PGPSETAAEEEALWGDGKGAAPALSPAERQAVAARHTRQVLGALVACLRLLRLLL-RVLPRGGDDDAQLRDAVMAAILDGQAAIACLPLATAAADTTLPEGCT--------------ATPTTVLALRAESLIVGVCRLWLPPHCCDASDXXXXXXXXXXXXXXXEAHHQDGSASPMAVDGEHIEAAVADADGDEAESSAVTAASTMQLIYKHALAAPAHHLGALRLLHALLPPAVPPPLHRL--PASLPERD---------------------ELAARVRLAAAVERKDGLREAALDEVERHMAWHLHCWDLA----LTPAAAAASVAA------------------------------ASADGXXXXXXXXXXXGAPRASSDGSIGALTAAMCHSSSPQVRALAADVAARAAGAGAATARGVTAALLADLQRCVDTYLAGPAAXXXXXXXXXXXXXXAAPWLPVCRALQAVHALADAD-GGAARVALLLQGALAALLPCLGLPRPEPIRAALCALRPFCSGSGRAAEARRHGAPPTSFGVVATAARNVMGKWHRVDLRVHADGAQLLAALAAVPSCAAHVLGALRPRGAEAAGAAVGEGKTTMLLPRLYSGLVKGLEDAQFKYRARAALAXXXXXXXXXXXXXXXXXXXXSAGTDARRGDDIDARVLLVARAACWAVLAPLALMTEGLVDAAEVAAVLIP 1757          
BLAST of mRNA_Ecto-sp13_S_contig9894.21536.1 vs. uniprot
Match: A0A8J2SEC1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEC1_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 2.160e-8
Identity = 82/326 (25.15%), Postives = 130/326 (39.88%), Query Frame = 0
Query:  386 HSASPVLHGRVLELARRAVGIGPMTARALCASLV---RSLIGCIERYVGQSKPLDGRSDKDREVS-------WESVCRVLAVVLAVSDNPRSGAGRVGLLLGGAIEALMPCLGLPKPEVIRSALEVLCSF------------VEGARVS--------------EVRRYSEPACSFGTLATAARNVVAKWHRVDLHVHAWGARLLATLAAQPSVAADALQALKPRGAEAAGVEAQEGKTTMLLPRLYAGLQKGLE----------------DTGNRYKHRLSLLKGGRVSEQKGL--DLDRRVLRLVRAACWAIQVPLALMEEGLVD 657
             SA+  L G   EL    V +GP++     + L+   R+ + C +    ++      +D ++  +       +E+  R   ++  V +   S +GR  L   GA   L+  L LPKPE++R ALE L +             +E +R++              EV             A A   V+AK+H+ D HVHA  AR LA LA +   A        PR   A G  +     + LL R   GL   LE                DT   +K ++       +SE++ +   L  R  +L+RAA +  + P+AL  +   D
Sbjct: 1018 ESAAKALQGVGSELVAGLVDLGPVSGAKTASYLLLEARAAVQCGKAKDAKAYAARAETDHEKRAAMFGELENFEAWHRAARLLTGVREACCSSSGRTALFACGAPLVLVDALSLPKPELLRLALESLAALTHDAQERTASDDIEKSRIALDALLAGYPPPERNEVYGSGISTTFLTAFARALAKVLAKYHKADAHVHASTARCLAILARERRNA--------PRVLRALGAASSSSGGSSLLTRAVTGLTTSLEALREGGPGHAPDAPEEDTTEEFKSKI-------LSERREVFEGLASRAAKLLRAAAYCARAPVALAWDARCD 1328          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9894.21536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JNJ9_9PHAE0.000e+095.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBI8_ECTSI0.000e+094.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZHG1_9STRA9.640e-8836.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2SEC1_9STRA2.160e-825.15Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9894contigEcto-sp13_S_contig9894:107..6109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9894.21536.1mRNA_Ecto-sp13_S_contig9894.21536.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9894 107..6110 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9894.21536.1 ID=prot_Ecto-sp13_S_contig9894.21536.1|Name=mRNA_Ecto-sp13_S_contig9894.21536.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=668bp
QPPPPSPEAPAVPAAAPEPAAQPPRLKDPSKEPLLLVGDLFTAPGPGEAE
EGELRWEKEPGGVVSEQRGLEAAEHEARLLTCALPALRLLRHCLGRLSDA
GAEPPVGPLDAVGALLDLEAALAMLPLDLPPSALPPGSDGKPSPSRGESW
DLGATPSVALALRAEALVLSSCRLWCPPRPWSRLRRNSGGGGSSSFLHRV
SAHALACPANHMSGARLLTALLPPESPAPLHRLVLPVATAAAAAAGVAAA
AAADSSASDGGSVGRLVGRVHTAAALEQSEGLRRQAVAALERRVREMLEG
WDVCVAGDLFPSKEAAAAEAGPDGDGGGAGEEGAGDKDGGGAFDRAGGGA
GGGAGGWRPSLETNPVLAVTAPGVVNVPAVVLSLCHSASPVLHGRVLELA
RRAVGIGPMTARALCASLVRSLIGCIERYVGQSKPLDGRSDKDREVSWES
VCRVLAVVLAVSDNPRSGAGRVGLLLGGAIEALMPCLGLPKPEVIRSALE
VLCSFVEGARVSEVRRYSEPACSFGTLATAARNVVAKWHRVDLHVHAWGA
RLLATLAAQPSVAADALQALKPRGAEAAGVEAQEGKTTMLLPRLYAGLQK
GLEDTGNRYKHRLSLLKGGRVSEQKGLDLDRRVLRLVRAACWAIQVPLAL
MEEGLVDAAVVAGVLSPK
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