prot_Ecto-sp13_S_contig1260.2152.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1260.2152.1
Unique Nameprot_Ecto-sp13_S_contig1260.2152.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length519
Homology
BLAST of mRNA_Ecto-sp13_S_contig1260.2152.1 vs. uniprot
Match: D7FXV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV8_ECTSI)

HSP 1 Score: 527 bits (1357), Expect = 3.570e-182
Identity = 321/471 (68.15%), Postives = 346/471 (73.46%), Query Frame = 0
Query:   51 MSSCDDLFYLDIDYSSDRDGCYEFSSTINLGNAFFLDGIEDEGSAVVYASENIVDDNLVWVLGNVNEWYDGGTWDISWLCRDAAFGDASSQDPWEVVQWNCYSSDDDDYTRLDEISITCSCGTTPAPTTLSCDDSFSLDVDYSSVRDGCYEVRTTPTINGEYAYFLNGIEEDVDSSVVYTTDDIVDDHVVWVLGSVNEYEGGDWDITRLCRDAALGDGSTQDPWEVAQWDCYSSADDAYTRLDEISITCSCDTTPAPTAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN---PPIATPSPTSGSRVVTVTPAPTVFSTVETRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGQTSPATVASSGXXXXXXXXXXXXXXXXXXXXXVIVTVVLLFKTGRLKRCGNGNATEPSPGVGSIPAAAPSATSRATTGTQLRTAVQYPEALRT 518
            MSSCDDLFYLDIDYS+DRDGCYE  STINL NA+FLDGI DEGSA+VYASE+IVDDNLVWVLGNVNEWYDG TWD+SWLCRDAA GDAS+Q P EVVQWNCYSS+D DYTRLDEISITCSCGTTPAPT LSCDDSFSLDVDYSSVRDGCYE+    TINGE +YFLNGIEEDVDSSVVYTTDD+VDDH+VWVLG+VNEYE G+W I+ +CRDAALGD  TQ+PWEVA+WDCYSS DD +TRLDEISITCSCDTTPAPTAGS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        PIA  SP      +T  P P+   T  T                                             +G T+PATVASSG                      I  VVLLFKTGRLK CGN N++EPSPGVGSIPA APSATS A  GTQL  A+QYPEALRT
Sbjct:    1 MSSCDDLFYLDIDYSTDRDGCYEVGSTINLENAYFLDGIADEGSALVYASESIVDDNLVWVLGNVNEWYDGDTWDVSWLCRDAALGDASTQHPSEVVQWNCYSSEDSDYTRLDEISITCSCGTTPAPTALSCDDSFSLDVDYSSVRDGCYELNIAWTINGENSYFLNGIEEDVDSSVVYTTDDLVDDHLVWVLGNVNEYEEGNWVISPICRDAALGDPFTQEPWEVARWDCYSSDDDDFTRLDEISITCSCDTTPAPTAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETETFTPAPIAIISPRETVSPLTTNPFPSPSFTEST------------------------------------PPFTLSPLPEGTTTPATVASSGGGDTSTMSVVAGAVGGGLVVGAIAAVVLLFKTGRLKPCGNDNSSEPSPGVGSIPAGAPSATSSAIAGTQLPAAMQYPEALRT 435          
BLAST of mRNA_Ecto-sp13_S_contig1260.2152.1 vs. uniprot
Match: A0A6H5JTE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTE7_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 2.670e-49
Identity = 87/112 (77.68%), Postives = 94/112 (83.93%), Query Frame = 0
Query:  127 SWLCRDAAFGDASSQDPWEVVQWNCYSSDDDDYTRLDEISITCSCGTTPAPTTLSCDDSFSLDVDYSSVRDGCYEVRTTPTINGEYAYFLNGIEEDVDSSVVYTTDDIVDDH 238
            SW CRDAA GD  + DPWEV Q +CY+SDD DYTRLDEISITCSCGTTPAPT  SCDDSFSLDVDY S RDGCYE+ T  TING+ AYFLNGIEEDVDSSVVY  DD+VDD+
Sbjct:    3 SW-CRDAALGDPFTHDPWEVTQSDCYNSDDGDYTRLDEISITCSCGTTPAPTAPSCDDSFSLDVDYFSGRDGCYELNTAWTINGKNAYFLNGIEEDVDSSVVYAADDMVDDN 113          
BLAST of mRNA_Ecto-sp13_S_contig1260.2152.1 vs. uniprot
Match: D7G7I5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I5_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 8.790e-32
Identity = 164/381 (43.04%), Postives = 193/381 (50.66%), Query Frame = 0
Query:  181 SCDDSFSLDVDYSSVRDGCYEVRTTPTINGEYAYFLNGIEEDVDSSVVYTTDDIVDDHVVWVLGSVNEY--EGGDWDITRLCRDAALGDGSTQDPWEVAQWDCYSSADDAYTRLDEISITCSCDT----TPAPTAGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPPIATPSPTSGSRV--------------------VTVTPAPTVFSTVETRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGQ-----------------TSPATVASSGXXXXXXXXXXXXXXXXXXXXXVIVTVVLLFKTGRLKRCGNGNATEPSPGVGSIPAAA-PSATSRATTGTQLRTAVQYPEALR 517
            SC  SF ++VDY+S  DGCYE  TT ++N    YFL+G+E    SS+VY +    DDH VWV+ +V +   E G +D++  C+DA   D +T  P EV QW+CYS+AD+ YTRLDEI ITCSC T    TP+P                                           PIATP PT                           +TP           XXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    T+PATVASSG                      I T++LLFKTGRLK C NG++   S GVG IPAAA PSA   A  G Q+  A+QYPEALR
Sbjct:    3 SCYSSFYVEVDYNSAVDGCYE-DTTTSVNDLDGYFLDGVEAG-GSSIVYASSSFRDDHFVWVVANVYDIDVEEGIFDVSITCKDAYEDDATTLHPVEVIQWNCYSTADEDYTRLDEIEITCSCGTVAGYTPSPVYS----------------------------------------PIATPEPTXXXXXXXXXXXXXXXXXXXXXXXXXAPITPXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALTESTSPFTPPPLPDITTTPATVASSGGGDPSTMSVVAVAVGGGLVVGAIATLILLFKTGRLKHCRNGSSHGTSRGVGPIPAAAGPSAMESARRGMQIPAAIQYPEALR 341          
BLAST of mRNA_Ecto-sp13_S_contig1260.2152.1 vs. uniprot
Match: A0A6H5K4G7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4G7_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 2.440e-24
Identity = 63/125 (50.40%), Postives = 84/125 (67.20%), Query Frame = 0
Query:   51 MSSCDDLFYLDIDYSSDRDGCYEFSST-INLGNAFFLDGIEDEGSAVVYASENIVDDNLVWVLGNVNEW-YDGGTWDISWLCRDAAFGDASSQDPWEVVQWNCYSSDDDDYTRLDEISITCSCGT 173
            M+SC   FYL+IDY+S+ DGCYE ++T IN  + +FLDG+E  GS+V            VWV+ NV +   + G +D +  C+DA   DA++  P EV+QWNCYS+ D+DYTRLDEI ITCSCGT
Sbjct:    1 MTSCYGSFYLNIDYTSEVDGCYEDTTTSINDLDGYFLDGVEAGGSSV-----------FVWVVANVYDMDVEEGIFDAATTCKDAYEEDATTLHPVEVIQWNCYSTADEDYTRLDEIEITCSCGT 114          
BLAST of mRNA_Ecto-sp13_S_contig1260.2152.1 vs. uniprot
Match: A0A6H5JVQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVQ9_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 1.160e-12
Identity = 37/47 (78.72%), Postives = 38/47 (80.85%), Query Frame = 0
Query:  181 SCDDSFSLDVDYSSVRDGCYEVRTTPTINGEYAYFLNGIEEDVDSSV 227
            SCD+ F LDVDY S  DGCYEV TT TINGEYAYFLNGIEE VDS V
Sbjct:    3 SCDNVFHLDVDYYSFYDGCYEVSTTTTINGEYAYFLNGIEE-VDSYV 48          
BLAST of mRNA_Ecto-sp13_S_contig1260.2152.1 vs. uniprot
Match: D7FYB8_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB8_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 1.030e-10
Identity = 49/94 (52.13%), Postives = 55/94 (58.51%), Query Frame = 0
Query:  425 GQTSPATVASSGXXXXXXXXXXXXXXXXXXXXXVIV--TVVLLFKTGRLKRCGNGNATEPSPGVGSIPAAAPSATSRATTGTQLRTAVQYPEAL 516
            G T+PAT+ASSG                   XX      VV+LFKTGRLK C +G    PSPG+GSIPAAAPSATS A  G QL  A+QYPE L
Sbjct:  180 GTTAPATIASSGRGDSDSATVGLVAGVLGVGXXXXXXGAVVVLFKTGRLKSCRHGTPNGPSPGMGSIPAAAPSATSSAMEGIQLPPAIQYPEVL 273          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1260.2152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FXV8_ECTSI3.570e-18268.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTE7_9PHAE2.670e-4977.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7I5_ECTSI8.790e-3243.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4G7_9PHAE2.440e-2450.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVQ9_9PHAE1.160e-1278.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYB8_ECTSI1.030e-1052.13Ferric reductase n=1 Tax=Ectocarpus siliculosus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 445..466
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..444
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 467..518
NoneNo IPR availableTMHMMTMhelixcoord: 444..466

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1260contigEcto-sp13_S_contig1260:1923..10029 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1260.2152.1mRNA_Ecto-sp13_S_contig1260.2152.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1260 1923..10029 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1260.2152.1 ID=prot_Ecto-sp13_S_contig1260.2152.1|Name=mRNA_Ecto-sp13_S_contig1260.2152.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=519bp
LTEHSWKRARLSAQAHAFWRAHWGRSLRHEGRSTFTGSLFPSEALPLAFG
MSSCDDLFYLDIDYSSDRDGCYEFSSTINLGNAFFLDGIEDEGSAVVYAS
ENIVDDNLVWVLGNVNEWYDGGTWDISWLCRDAAFGDASSQDPWEVVQWN
CYSSDDDDYTRLDEISITCSCGTTPAPTTLSCDDSFSLDVDYSSVRDGCY
EVRTTPTINGEYAYFLNGIEEDVDSSVVYTTDDIVDDHVVWVLGSVNEYE
GGDWDITRLCRDAALGDGSTQDPWEVAQWDCYSSADDAYTRLDEISITCS
CDTTPAPTAGSAPAPTVGSTPAPAVGPSPFPTVGPTPAPTIGSIPAPSNP
PIATPSPTSGSRVVTVTPAPTVFSTVETRARTFTPSPIAIISSPETISPL
TANPFPSPSFTESTSPFTLSPLPKGQTSPATVASSGGGDSSTMSVVAGAV
GGGLVVGVIVTVVLLFKTGRLKRCGNGNATEPSPGVGSIPAAAPSATSRA
TTGTQLRTAVQYPEALRT*
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