mRNA_Ecto-sp13_S_contig9869.21513.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9869.21513.1
Unique NamemRNA_Ecto-sp13_S_contig9869.21513.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: D7G364_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G364_ECTSI)

HSP 1 Score: 518 bits (1334), Expect = 7.080e-184
Identity = 261/286 (91.26%), Postives = 270/286 (94.41%), Query Frame = 1
Query:    1 MQWVGTSGEKMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKRPSGEEEHDWRHEESEASMRLLEEGDRDASCIGRRLSSGLE 858
            MQ VG+SGEKMPQ LFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALIT GIVIFNLA+ S  E+DK+NS YGLCLLV SL+FDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQW+KGSLFCADNPLV GYVVAFSLAAACGQFFIYYTI+TFNPLACATITTTRKFFTIVFSVITFGH+ISLKQWGGVAMVFV IGFYMHGKHKRPS EEEHD   EESEASMRLLEEGDRDASCIG+RLSS  E
Sbjct:   63 MQCVGSSGEKMPQQLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITTGIVIFNLAERSNNEQDKRNSMYGLCLLVASLIFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWMKGSLFCADNPLVTGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHSISLKQWGGVAMVFVGIGFYMHGKHKRPSSEEEHDCCQEESEASMRLLEEGDRDASCIGQRLSSSPE 348          
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: A0A6H5JQ56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ56_9PHAE)

HSP 1 Score: 425 bits (1093), Expect = 6.490e-149
Identity = 216/237 (91.14%), Postives = 221/237 (93.25%), Query Frame = 1
Query:  148 MIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKRPSGEEEHDWRHEESEASMRLLEEGDRDASCIGRRLSSGLE 858
            MIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGL LLVTSL+FDGVMTSSQERLK ICKPT YEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSL AACGQFFIYYTI+TF+PLACATITTTRKFFTIVFSVITFGH+ISLKQWGGVAMVFV IGFYMHGKHKRP  E  HD RH+ESEASMRLLEEGD DAS I RR  S LE
Sbjct:    1 MIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLSLLVTSLIFDGVMTSSQERLKTICKPTAYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLTAACGQFFIYYTITTFSPLACATITTTRKFFTIVFSVITFGHSISLKQWGGVAMVFVGIGFYMHGKHKRPRDEGGHDLRHDESEASMRLLEEGDCDASFIDRRPPSSLE 237          
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: D7G358_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G358_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 1.090e-118
Identity = 178/242 (73.55%), Postives = 198/242 (81.82%), Query Frame = 1
Query:   13 GTSGEKMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738
            G SG+KMP HLFG  G AYIGAM+ SIEAL+YVNFPTKELGKSCKMIPVMLFGVLFAKKQYS++EYLCVALIT+GIV FNL+     +EDK+NSTYGL LL  SL+ DGV  S+QERLKA CKPTV+EMMF+ NAWAL  LSAAA+ SGQ V+G  FC+ NP VM YV+ FSLAAA GQ FIYYTIS FNPL C TITTTRKFFTIV SVI FGH I  KQWGGVAMVF  IG+ M GK++R
Sbjct:   85 GRSGDKMPHHLFGTAGFAYIGAMVCSIEALKYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSLQEYLCVALITVGIVTFNLSGKPHNKEDKENSTYGLGLLAFSLILDGVTGSAQERLKAACKPTVHEMMFFMNAWALAILSAAAYLSGQAVEGYAFCSANPSVMSYVLGFSLAAAFGQNFIYYTISNFNPLVCTTITTTRKFFTIVCSVIIFGHAIGPKQWGGVAMVFTGIGYEMRGKYQR 326          
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: A0A835ZCP5_9STRA (UAA transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCP5_9STRA)

HSP 1 Score: 271 bits (693), Expect = 1.930e-86
Identity = 142/240 (59.17%), Postives = 175/240 (72.92%), Query Frame = 1
Query:   19 SGEKMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738
            SGE +P  LF + G+ YI AMI S+E+L Y+NFPTKELGKSCKMIPVMLFGV+FA K+YSVR+Y+ VALIT GIV FNLA   K +  ++NSTYGL LL  SLV DGV  S+Q+ +K   K TV+EMMF+ NAWAL  L+  A  +GQ   G  FC +NP V+  +  F+L AA GQ FIY+TIS F+ L C TITTTRKFFTI+FSV+ FGH +S KQW GVAMVF ++   M  KH++
Sbjct:  100 SGEAIPHKLFSMAGAGYISAMICSLESLNYINFPTKELGKSCKMIPVMLFGVVFAGKRYSVRDYVGVALITAGIVTFNLA--GKHKSGRENSTYGLALLFMSLVLDGVTGSTQDNIKRAHKHTVHEMMFWMNAWALVVLTPMAVLTGQAAGGYAFCQENPAVLRDLFGFALTAALGQNFIYFTISHFSSLVCTTITTTRKFFTILFSVLFFGHPMSPKQWAGVAMVFTALIDNMWSKHQK 337          
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: A0A2D4BZF8_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZF8_PYTIN)

HSP 1 Score: 252 bits (644), Expect = 2.760e-79
Identity = 120/236 (50.85%), Postives = 165/236 (69.92%), Query Frame = 1
Query:   31 MPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738
            MP   F +T SAY+GAM+ S EAL++V++PT+ LGKSCKMIPVML GVL  +K+Y++R+Y+CV LIT GI +F L K S     ++NSTYGL LL TSL  DG+    QE +    +PTV++ MFYTN WA+ +  A A  +GQ V G  FC +NP ++  V  FS+ +A GQ FIY+TI  F+ L C TITTTRKFFTI+FSV+ +GH+++   W GVA+VF  +G+ +  K+++
Sbjct:   92 MPLKPFAVTSSAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVLLITTGIAVFQLGKASSKHASQENSTYGLLLLFTSLTLDGISGPKQEEISQTLRPTVHQQMFYTNLWAVLYTGAGALVTGQAVSGFQFCVENPAILNSVFYFSICSAXGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHSLTAMSWIGVAIVFTGLGWELSSKYQK 327          
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: A0A5D6XRA2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRA2_9STRA)

HSP 1 Score: 248 bits (633), Expect = 7.250e-78
Identity = 121/237 (51.05%), Postives = 161/237 (67.93%), Query Frame = 1
Query:   28 KMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738
            +MP   F  T  AY+GAM+ S EAL++V++PT+ LGKSCKMIPVML GVL  +K+YS REY CV LIT GI +F L K S     ++NS+YGL LL  SL  DGV    QE +    +P+V++ MFYTN WA+ +  A A A+GQ + G  FCA+NP ++  V  FS+ +A GQ FIY+TI  F+ L C TITTTRKFFTI+FSV+ +GH +S   W GVA+VF  +G+ +  K+ +
Sbjct:   73 RMPLQPFAFTSFAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMLMGVLLRRKKYSAREYFCVLLITAGIAVFQLGKASAKHAAQENSSYGLVLLFLSLTLDGVSGPKQEEIAQTLRPSVHQQMFYTNLWAVIYTGAGALATGQGLAGLAFCAENPAILSSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSATSWAGVAVVFAGLGWELVSKYHK 309          
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: A0A6V2XTI4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XTI4_HETAK)

HSP 1 Score: 249 bits (636), Expect = 1.800e-77
Identity = 122/246 (49.59%), Postives = 170/246 (69.11%), Query Frame = 1
Query:    1 MQWVGTSGEKMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738
            M  +G SG+KMPQ++F   G+ YIGAM+ S E+L++VN+PT+ LGKSCKMIPVMLFGVLFA K+YS++EYLCV LIT GI +F ++ G      K+NS +GL LL  SL  DG+  S+Q +LK   KPTV+E+MF+TN WA+  L+     +GQ   G  +   NP +   +  FS  +A GQ FI++T+S F+PL C TITTTRKFFT++FSV  FGH ++   W  V++VF  +   ++GK+++
Sbjct:  110 MLLLGPSGDKMPQNMFAAVGATYIGAMLTSNESLKHVNYPTQALGKSCKMIPVMLFGVLFAGKKYSMKEYLCVLLITAGIAMFQMS-GKTKSSGKENSYFGLFLLFVSLACDGLTGSNQSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHWIAVSLVFAGLTGEVYGKYQK 354          
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: K3X0M7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0M7_GLOUD)

HSP 1 Score: 246 bits (627), Expect = 7.220e-77
Identity = 118/237 (49.79%), Postives = 161/237 (67.93%), Query Frame = 1
Query:   28 KMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738
             MP   F  T  AY+GAM+ S EAL++V++PT+ LGKSCKMIPVM+ GVL  +K+Y++REY+CV LIT+GI +F L K S     ++NSTYGL LL  SL  DGV    QE +    +P+V++ MFYTN WA+ +  A A  +GQ   G  FC +NP ++  V  FS+ +A GQ FIY+TI  F+ L C TITTTRKFFTI+FSV+ +GH +S   W GV +VFV +G+ +  K+++
Sbjct:   80 SMPLQPFAFTSFAYLGAMLCSNEALKHVSYPTQALGKSCKMIPVMIMGVLIRRKKYTMREYICVLLITVGIAVFQLGKASSKHAAQENSTYGLILLFLSLTLDGVSGPKQEEISQTLRPSVHQQMFYTNLWAVIYTGAGALLTGQAFSGFFFCVENPAILNSVFYFSICSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHQLSAMSWIGVTIVFVGLGWELTSKYQK 316          
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: H3GWN5_PHYRM (Uncharacterized protein n=18 Tax=Peronosporaceae TaxID=4777 RepID=H3GWN5_PHYRM)

HSP 1 Score: 243 bits (621), Expect = 5.980e-76
Identity = 115/237 (48.52%), Postives = 164/237 (69.20%), Query Frame = 1
Query:   28 KMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738
            +MP   F +T  AY+GAM+ S EAL++V+FPT+ LGKSCKMIPVML GVL  +K+Y++R+Y+CV +IT GI +F L K S    +++NSTYGL LL  SL  DG+    QE +    +P+V++ M  TN WA+ +    A  +GQ ++G  FC +NP ++  V  FS+ +A GQ FIY+TI  F+ L C TITTTRKFFTI+FSV+ +GH +SL  W GVA+VF+ +G+ +  K+++
Sbjct:   82 RMPLAPFAMTAGAYLGAMLCSNEALKHVSFPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVVVITTGIAVFQLGKASAKHAERENSTYGLLLLFASLTLDGISGPKQEEIAHQLRPSVHQQMLNTNIWAVVYTGVGALVTGQALEGFFFCIENPSILNSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSLMSWLGVAVVFIGLGWELSSKYQK 318          
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Match: A0A0P1AG43_PLAHL (Solute carrier family 35 member b1 n=6 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AG43_PLAHL)

HSP 1 Score: 243 bits (619), Expect = 1.200e-75
Identity = 116/237 (48.95%), Postives = 164/237 (69.20%), Query Frame = 1
Query:   28 KMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKMIPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTYGLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACATITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKR 738
            +MP   F LT  AY+GAM+ S EAL++V+FPT+ LGKSCKMIPVML GVL  +K+Y++R+Y+CV +IT GI +F L K S    +++NSTYGL LL  SL  DG+    QE +    +P+V++ MF TN WA+ +    A  +GQ ++G  FC +NP ++  V  FS+ +A GQ FIY+TI  F+ L C TITTTRKFFTI+FSV+ +GH +SL  W GVA+V + +G+ +  K+++
Sbjct:   82 RMPLAPFALTAGAYLGAMLCSNEALKHVSFPTQALGKSCKMIPVMLMGVLIRRKKYTLRDYICVLVITSGIAVFQLGKSSAKHAERENSTYGLLLLFLSLTLDGISGPKQEEIAHQLRPSVHQQMFNTNIWAVVYTGIGALVTGQALEGLYFCINNPAILNSVFYFSICSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSLMSWFGVAIVNIGLGWELSSKYRK 318          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9869.21513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G364_ECTSI7.080e-18491.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQ56_9PHAE6.490e-14991.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G358_ECTSI1.090e-11873.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZCP5_9STRA1.930e-8659.17UAA transporter n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A2D4BZF8_PYTIN2.760e-7950.85Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A5D6XRA2_9STRA7.250e-7851.05Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6V2XTI4_HETAK1.800e-7749.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K3X0M7_GLOUD7.220e-7749.79Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3GWN5_PHYRM5.980e-7648.52Uncharacterized protein n=18 Tax=Peronosporaceae T... [more]
A0A0P1AG43_PLAHL1.200e-7548.95Solute carrier family 35 member b1 n=6 Tax=Peronos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9869contigEcto-sp13_S_contig9869:1881..5727 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score520.8
Seed ortholog evalue4.1e-145
Seed eggNOG ortholog2880.D7G364
Model size861
KEGG koko:K15275
KEGG TC2.A.7.11.1,2.A.7.11.4
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.UDP-galactose transmembrane transporter activity
EggNOG OGsCOG0697@1,KOG1580@2759
Ec32 ortholog descriptionUAA transporter
Ec32 orthologEc-03_004650.1
Cds size861
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9869.21513.1prot_Ecto-sp13_S_contig9869.21513.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9869 1881..5727 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464248.7190464-CDS-Ecto-sp13_S_contig9869:1880..19101681464248.7190464-CDS-Ecto-sp13_S_contig9869:1880..1910Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9869 1881..1910 +
1681464248.733476-CDS-Ecto-sp13_S_contig9869:2669..27861681464248.733476-CDS-Ecto-sp13_S_contig9869:2669..2786Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9869 2670..2786 +
1681464248.750531-CDS-Ecto-sp13_S_contig9869:3213..33451681464248.750531-CDS-Ecto-sp13_S_contig9869:3213..3345Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9869 3214..3345 +
1681464248.7627175-CDS-Ecto-sp13_S_contig9869:3981..40591681464248.7627175-CDS-Ecto-sp13_S_contig9869:3981..4059Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9869 3982..4059 +
1681464248.774834-CDS-Ecto-sp13_S_contig9869:4560..47101681464248.774834-CDS-Ecto-sp13_S_contig9869:4560..4710Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9869 4561..4710 +
1681464248.7863734-CDS-Ecto-sp13_S_contig9869:5197..53701681464248.7863734-CDS-Ecto-sp13_S_contig9869:5197..5370Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9869 5198..5370 +
1681464248.7968614-CDS-Ecto-sp13_S_contig9869:5546..57271681464248.7968614-CDS-Ecto-sp13_S_contig9869:5546..5727Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9869 5547..5727 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9869.21513.1

>prot_Ecto-sp13_S_contig9869.21513.1 ID=prot_Ecto-sp13_S_contig9869.21513.1|Name=mRNA_Ecto-sp13_S_contig9869.21513.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=287bp
MQWVGTSGEKMPQHLFGLTGSAYIGAMILSIEALQYVNFPTKELGKSCKM
IPVMLFGVLFAKKQYSVREYLCVALITMGIVIFNLAKGSKTEEDKQNSTY
GLCLLVTSLVFDGVMTSSQERLKAICKPTVYEMMFYTNAWALGFLSAAAF
ASGQWVKGSLFCADNPLVMGYVVAFSLAAACGQFFIYYTISTFNPLACAT
ITTTRKFFTIVFSVITFGHTISLKQWGGVAMVFVSIGFYMHGKHKRPSGE
EEHDWRHEESEASMRLLEEGDRDASCIGRRLSSGLE*
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mRNA from alignment at Ecto-sp13_S_contig9869:1881..5727+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9869.21513.1 ID=mRNA_Ecto-sp13_S_contig9869.21513.1|Name=mRNA_Ecto-sp13_S_contig9869.21513.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3847bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9869:1881..5727+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGTGGGTCGGGACATCCGGGGAAAAGGTGCGACCCCAGACATTGTT ACCCGGTGTCCGGGTCTGGTCGAACGCGGTTGATGATGCCGGCTGCCTGT CGTTCGACGGCCACGATTATGATCTAACTTCTAAGGTCAATGTTGAGGAA GCCAACCACAAATTAACTACAGCAGTATCAATGTACCAGTCCACCACATG GTGCAGGTCCGCTAGACCCGACAGCTCCTTTTTGTTCCAGACAACACTCA TGGAAAGACTTCAAACCTTTCTAAGACCTACGTCCTCTGTACGCTCATGT GGAACCCGTCTTACGAACTTCCATGATGTTGAAGGTTTTGCGAAACCGTT CTGTTCTCTCACCCAGGAACTTTTGTAATAAATACTCAAATGCCCCCCAT TGCGATCGGCACGAATGTCGCCTTTTAGCGAGGCCGTGGGTCCAAACACA CTGGAGGGCCTGTACCGGAACCTAAGGTGAATCAGACCGTGAGTCCAAAC ACTCCAGAGGGCCTGCACCTGCACCTGAAGGCAATCGAAACAAACTACTA CTGCTGCAGACTACCTCTCTAAGTGTAGCGTGTTGGCGACCCCGGATGTA CTCGGGATCAAACAAAACGTTCTACGCGGTTCGGCATCGGTGGATATTTA TTGATTCGGAGGGGTGCTGCAACACCTGGCGATGCGGGAAGGTGAAATAC ATCGCCAATGCGACGTCTATGCATACCACGATACGACTCGTTTGAGTTCT TCAGTCGCGGTGATTTGCAACATGTTCCATTATTCGCAGATGCCACAGCA TCTCTTCGGGTTGACTGGGTCCGCTTACATCGGCGCCATGATCCTGTCGA TAGAGGCACTCCAGTACGTTAACTTCCCGACCAAGGAGCTTGGGAAGTCT TGCAAGGTAAAGCCGGAGGTCCCTCGTTGATGTCTTAGTGACGGGCAACC ATGGCAGCGGGAAGATTTGGTGCAGACAAGACAAGACTGCTAGGTGGTGG TGGCGCCTTTTTCGCCGCGCCCCGCGGTGCCCTCCGAAGAGGAATGTGGT GCAACACTTCCAGCAACGTTGACCGAGCGAACGGTGGTGAAGAACAACGT GTTTTAAGTTTTGATTCTGCGCACCGAAACCGGAGTACTCAAATTATCAA GTTAATTATTTTCGTTTATTGAAAGCTAACTTTGTTGCAGCAGTAGTTAC GTTTTTTTGGCAGACAAAGAATGGAGAGGCCACATGTAGGTCCGCGATGA TTCCGATCGATTGCAGCTGACGGAGACCACATACCGATGGAGTGGCCTAC ACTTGCGTGTCTGTGTCTGTGGCCACAACAAAGATGATCCCGGTGATGCT GTTCGGAGTGCTGTTCGCCAAGAAGCAGTACAGCGTGCGAGAGTACCTCT GCGTGGCGCTCATCACGATGGGGATCGTCATCTTCAATTTAGCCAAGGGG TCCAAGACCGAAGAGGTACTGTAGCTGCGTAATAACAAAAATTGCCAGAT GTTGCGCGTCGGATCTCCCGTGGTTGGTTTGCTTCTTGTATGCTGTTCTT TTTGTCGTGCAATTTGCTCTCGGCGCCAGGTTTCCCTTTTTATATCACGT TCAAGGCACCAACCGGAGTCATAAAAGAAGTATTCTCCACCTAAATGCAC AGGGTCCATGGTTCTTCCTCCGTCAGTGTTTTTTCCATCGGTTTTCTCCC AACTTCCGTGAAAATACCGCGCTGGTGGTCGGTACTGATATTCCGTCGGT ATACCGCCGAATTGCTGTAAAACCGCCTCGGCCAAAGTCGTTACCGTTGA ACAGGTACCGCCAAATTCATGTTGTACCGCCTTTGCCAAAGTCTTCACTG CCTTTAACTCCAGTACCACCTACCACCGAAAAATGCCGACGTATGGCATT GCCGCCGAAACGAAACCATGGCAGCTGTTAAACCGTTACCGACGCTTTCC ACCGCCATGGCCTACAACGTCCATGTCCTAGGCGTGGAAATCATCGTCGA AGTGTAGTCTGGCTTTGTCGTTTCTCGCCCTTGGTTGAGTCTGAGACAGA AACATTAATGTTGGACTCTTTTGTGCCCCCGTGTCTTTGTTGCCCTTTCA GGACAAGCAAAACAGCACGTATGGGCTGTGCCTACTGGTTACAAGCCTGG TCTTCGACGGGGTCATGACCAGCTCTCAGGTTTGTCTACAACTGTCGCCA TCGTTGATGTTTCGAGGCGTTCCTGCTGTGTTGTAGTGAAAGGGTGACGT TTTTGACGGCGGTGACTGACTCTGCTGCAACCCTCTCATCTATCTGTATT GCAGGTCCTATGTTCTGTTCAAACCCATCTTATCACGCTAAATCGGGAAC TCAGTTCTGGCCGGGACCCAGTGGCGAGATCATTCGTCACTACACTTTCG ATAACTCCCTCCGCAATATATGCACTCATCGATGTGTCTTCTTGTCGACA AATCAGTTTCGATGTGGTTTTCTACCCTGAAAAAGGCGAAATCAAATCAG TTGACATACGGATGGCCCCTCGCAAGGTGTTGGCGGGTACGTCGTGCGTG AGTGGCCGACCGACAGCTTGACGACGGGCACCCCGTTGTCTAGAGGAATG TCCGGTGTCGTCGTGGACAACCTGTACCCGCCGACTTACCCCGCGCTCCT ACGTACACCCCCTGCACCTCCCCCGTCCAGGAGCGTTTGAAGGCCATCTG CAAGCCCACCGTCTACGAGATGATGTTCTACACGAACGCGTGGGCGCTGG GCTTCCTGTCAGCGGCAGCCTTCGCCTCGGGGCAATGGGTGAAAGGATCG CTGTTCTGCGCGGACAACCCTCTGGTCATGGTGAGTCTGTGAATGACACC ACGTTCTCTAGGTCATATCTGTGTGATGTTTGTTCGCGTCATTGTGGCAT TGTTGTTTGACATTTCTTTGGCGTGCCTTTTGCATTTTTCTTGGCATTCT TTCGTGTGAGAAGTGAAGGCGGTTCGAGGGCAGGGACAGGGATAGTGATC AGACTGGGAGGGTCGGGATCGTGGTGATTGTGTTGCTAGAGCATATTTCT AGCTGATTTTTCTTCATATCGCAACCCCAGCGTCGTCTTGGCTTCGCATC TGCTCCATTCGACAGCGGCGATTCAAGCGGGTCGGTGTGGCACGCGTAAC CATTTCTACGACTGACGTTGTTGGCTGATCACTTTGGGAACGCTAATAGC AAACATGATCGCGCTTCTAAACATCATAATAATTCACTCCGGACCAAGTG ACCTGCTACCGCACTGCAACCATGTGTGTGATGATTTTTTCCTGGCCTTG ATTTCCGCCGTCCGCAGGGCTACGTGGTGGCGTTCTCATTGGCGGCGGCG TGCGGCCAGTTCTTCATCTACTACACCATCAGCACCTTCAATCCGCTGGC GTGCGCGACGATCACAACGACCCGAAAGTTCTTCACTATCGTCTTCTCCG TCATCACCTTCGGACACACCATCAGCCTGAAGCAGTGGGGGTGAGTTGTG TTCCTCTGGTCCCTCCGACGCTGCGCCTTGGTTCCCGGTTTCGTACTTGA CTTCCCTTTGTTCGCTGTGTTGCTGTGGCTCTGGCTATTGCTGTTCTCAT TGAGCTGCGCAAACGTACCAGTTCGTCACCCGAAACATGTTCGTTCACGT TTCTTGATTTCGGCAGGGGCGTGGCGATGGTGTTCGTCAGTATCGGCTTC TACATGCACGGCAAGCACAAGCGGCCTAGCGGTGAGGAGGAACACGATTG GCGCCATGAAGAATCCGAAGCCTCGATGCGACTGCTTGAAGAAGGCGATC GCGATGCCTCATGTATAGGCCGACGTCTATCGTCCGGCCTGGAGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9869:1881..5727+

>mRNA_Ecto-sp13_S_contig9869.21513.1 ID=mRNA_Ecto-sp13_S_contig9869.21513.1|Name=mRNA_Ecto-sp13_S_contig9869.21513.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=861bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9869:1881..5727+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCAGTGGGTCGGGACATCCGGGGAAAAGATGCCACAGCATCTCTTCGG
GTTGACTGGGTCCGCTTACATCGGCGCCATGATCCTGTCGATAGAGGCAC
TCCAGTACGTTAACTTCCCGACCAAGGAGCTTGGGAAGTCTTGCAAGATG
ATCCCGGTGATGCTGTTCGGAGTGCTGTTCGCCAAGAAGCAGTACAGCGT
GCGAGAGTACCTCTGCGTGGCGCTCATCACGATGGGGATCGTCATCTTCA
ATTTAGCCAAGGGGTCCAAGACCGAAGAGGACAAGCAAAACAGCACGTAT
GGGCTGTGCCTACTGGTTACAAGCCTGGTCTTCGACGGGGTCATGACCAG
CTCTCAGGAGCGTTTGAAGGCCATCTGCAAGCCCACCGTCTACGAGATGA
TGTTCTACACGAACGCGTGGGCGCTGGGCTTCCTGTCAGCGGCAGCCTTC
GCCTCGGGGCAATGGGTGAAAGGATCGCTGTTCTGCGCGGACAACCCTCT
GGTCATGGGCTACGTGGTGGCGTTCTCATTGGCGGCGGCGTGCGGCCAGT
TCTTCATCTACTACACCATCAGCACCTTCAATCCGCTGGCGTGCGCGACG
ATCACAACGACCCGAAAGTTCTTCACTATCGTCTTCTCCGTCATCACCTT
CGGACACACCATCAGCCTGAAGCAGTGGGGGGGCGTGGCGATGGTGTTCG
TCAGTATCGGCTTCTACATGCACGGCAAGCACAAGCGGCCTAGCGGTGAG
GAGGAACACGATTGGCGCCATGAAGAATCCGAAGCCTCGATGCGACTGCT
TGAAGAAGGCGATCGCGATGCCTCATGTATAGGCCGACGTCTATCGTCCG
GCCTGGAGTGA
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