prot_Ecto-sp13_S_contig9865.21509.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9865.21509.1
Unique Nameprot_Ecto-sp13_S_contig9865.21509.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length469
Homology
BLAST of mRNA_Ecto-sp13_S_contig9865.21509.1 vs. uniprot
Match: D7FNZ5_ECTSI (DUF1279 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNZ5_ECTSI)

HSP 1 Score: 748 bits (1931), Expect = 1.120e-269
Identity = 424/471 (90.02%), Postives = 437/471 (92.78%), Query Frame = 0
Query:    1 MAMVARSLGPVQTAVLRRTRLGDGSLLLPASRTIASISGRINKASPKPSR-SLSRRNTYSTSAARGTAPVATMQPIKGPPCVLRSSGDVSGNSATCIRRNLHCNSGRAVATADWLRPPVGAVLLGQGDASRAGGMPSSGAVNQISTGGHGVVFLQAAGLRTMSRVFAPATGDAAGKKPGGEAASPSQPGSSNGHGNKTPPSPSEIRPPAGSGGRGGSNTMDPPAGKPNNPQA--AVKATGSIGDNERTVKGGNPDLREREGTFVEMRDRIRHARADASEDAKDWMRXXXXXXXXXXXXXXXXXXXXXXXXXDGTLGAQLSDQAKESSSRLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYGVLTNLPSEGTAVIEHMQEWMKNAPEWAQGYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAMTPRMARALGRAPAKVSDADEDEGSDADDGGGGSRKGGSTR 468
            MAMVAR LGPVQT VLRRT LGDGSLLLPASRTIASI G INKASPKPSR S S RNTYSTSAARGTAPVATMQP+KGPPCVLRSSG V GNSATCIRRNLHCNSGRAVATADWLRP VGAVLL QGDASRAGGMPSS AVNQ+ +GGHGVVF+QAAGLRT+SRVFAPATG AAGKKPGGEAASPSQPG  NGHG+KTPPSPSEIRPPAGSGGRG S+ MDPPA K NNPQA  A K  GSIGDNERTVKGGNPDLR+REG FVEMRDRIRHARADASEDAKDWMR XXXXXXXXXXXXXXXXXXXXX   DGTLGAQLSDQAKESS+RLQDLWRKYGAVGIGTYFGIYFGSIA+FYGIYDYGVLT+LPS GTAVIEHMQEWMK+APEWAQGYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIA+TPRMARALGRAPAKVSDADEDEGSDADDG GG RKGGSTR
Sbjct:    1 MAMVARRLGPVQTVVLRRTGLGDGSLLLPASRTIASIPGPINKASPKPSRRSPSCRNTYSTSAARGTAPVATMQPVKGPPCVLRSSGSVGGNSATCIRRNLHCNSGRAVATADWLRPTVGAVLLRQGDASRAGGMPSSSAVNQLPSGGHGVVFVQAAGLRTLSRVFAPATGGAAGKKPGGEAASPSQPGGGNGHGSKTPPSPSEIRPPAGSGGRGASSNMDPPAAKLNNPQAEAAEKPAGSIGDNERTVKGGNPDLRDREGPFVEMRDRIRHARADASEDAKDWMRDXXXXXXXXXXXXXXXXXXXXXARLDGTLGAQLSDQAKESSNRLQDLWRKYGAVGIGTYFGIYFGSIAVFYGIYDYGVLTSLPSGGTAVIEHMQEWMKSAPEWAQGYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAITPRMARALGRAPAKVSDADEDEGSDADDGSGGGRKGGSTR 471          
BLAST of mRNA_Ecto-sp13_S_contig9865.21509.1 vs. uniprot
Match: A0A836CLB5_9STRA (DUF1279 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB5_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.270e-24
Identity = 51/118 (43.22%), Postives = 79/118 (66.95%), Query Frame = 0
Query:  328 QDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYGVLT--NLPSEGTAVIEHMQEWMKNAPEWAQGYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAMTPRMARALGRAPAKV 443
            +++WR+YG V +GTYFGIY  ++   Y ++DYG +T  ++P+      + +Q  ++  P+WAQ   + L+  M ++   R+FVLAW T KV EPVR+L  + +TPR+ARALGRAP K+
Sbjct:    2 KEMWRRYGLVAVGTYFGIYVATLGGLYLVFDYGFMTASDMPAGAAHAGDTLQALVERLPDWAQAKVNALYAKMQQEPGFRNFVLAWLTTKVTEPVRVLATVGITPRIARALGRAPKKL 119          
BLAST of mRNA_Ecto-sp13_S_contig9865.21509.1 vs. uniprot
Match: A0A3R7J9G6_9STRA (DUF1279 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J9G6_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.900e-10
Identity = 46/120 (38.33%), Postives = 59/120 (49.17%), Query Frame = 0
Query:  326 RLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYG-VLTNLPSEGTAVIEHMQEWMKNAPEWAQGYSDRLFGAMVEDHRARS----FVLAWATCKVLEPVRLLGAIAMTPRMARALGRAP 440
            RL+DLWRKYG V IGTY  +Y   +   Y   D G V T+         E     +    ++ +   D      +E  R  S    F+LAW   K  EPVRL   +A+TPR+AR LGRAP
Sbjct:    6 RLKDLWRKYGIVAIGTYLSLYGAVLGSIYVAIDQGWVRTSKRRSSREGQEESFNLITTTNKFVKFAEDMGIAQYLEVERVNSKTGSFLLAWVATKFTEPVRLAVTLAVTPRIARFLGRAP 125          
BLAST of mRNA_Ecto-sp13_S_contig9865.21509.1 vs. uniprot
Match: A0A024GSA6_9STRA (DUF1279 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GSA6_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 5.880e-10
Identity = 52/133 (39.10%), Postives = 71/133 (53.38%), Query Frame = 0
Query:  319 QAKESSSRLQDLWRKYGAVGIGTYF---GIYFGSI--AIFYGIYDYGVLTNLPSEGTA---VIEHMQEWMKNAPEWAQGYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAMTPRMARALGRAPAKV 443
            Q++   +R +DLWRKYG V IGTYF   GI  GSI  +I  G+      T L  + T    V+    + +  A ++  G    L    V   +  SFV+AW   K  EP+RL   +A+TPR+AR LGRAP K+
Sbjct:   56 QSQTHLNRFKDLWRKYGLVAIGTYFTMYGIVLGSIYISIENGLISKNRNTRLNKDTTTNFDVVSTTNKMIALAEDY--GLVKYLDVERVNS-KTGSFVIAWVATKFTEPIRLAITLAITPRIARFLGRAPKKI 185          
BLAST of mRNA_Ecto-sp13_S_contig9865.21509.1 vs. uniprot
Match: H3GLJ1_PHYRM (DUF1279 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLJ1_PHYRM)

HSP 1 Score: 68.9 bits (167), Expect = 9.650e-10
Identity = 49/122 (40.16%), Postives = 62/122 (50.82%), Query Frame = 0
Query:  326 RLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYG-VLTN--LPSEGTAVIEHMQEWMKNAPEWAQGYSDRLFGAMVEDHRARS----FVLAWATCKVLEPVRLLGAIAMTPRMARALGRAP 440
            RL+DLWRKYG V IGTY  +Y   +   Y   D G V TN    S+G    +     +    ++ +   D      +E  R  S    F+LAW   K  EPVRL   IA+TPR+AR LGRAP
Sbjct:   70 RLKDLWRKYGVVAIGTYLTMYGAVLGSVYLAIDQGWVRTNKRTSSKGEGQSDETFNLVTTTNKFVRFAEDLGIAQYLEVERVNSKTGTFLLAWIATKFTEPVRLALTIAVTPRIARFLGRAP 191          
BLAST of mRNA_Ecto-sp13_S_contig9865.21509.1 vs. uniprot
Match: D0MUM9_PHYIT (DUF1279 domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MUM9_PHYIT)

HSP 1 Score: 68.2 bits (165), Expect = 1.090e-9
Identity = 49/121 (40.50%), Postives = 62/121 (51.24%), Query Frame = 0
Query:  326 RLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYGVL-TN--LPSEGTAVIEHMQEWMKNAPEWAQ---GYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAMTPRMARALGRAP 440
            RL+DLWRKYG V IGTY  +Y   +   Y   D G L TN    S+G    +     +    +W     G +  L    V   +  +F+LAW   K  EPVRL   IA+TPR+AR LGRAP
Sbjct:   42 RLKDLWRKYGIVAIGTYLSMYGAVLGSMYLAIDQGWLRTNRRTSSKGEGQSDESFNLVATTNKWIAEDLGIAQYLEVEQVSS-KTGTFLLAWIATKFTEPVRLALTIAVTPRIARFLGRAP 161          
BLAST of mRNA_Ecto-sp13_S_contig9865.21509.1 vs. uniprot
Match: M4BYX8_HYAAE (DUF1279 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYX8_HYAAE)

HSP 1 Score: 67.8 bits (164), Expect = 3.590e-9
Identity = 49/126 (38.89%), Postives = 68/126 (53.97%), Query Frame = 0
Query:  326 RLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYGVL--------TNLPS-EGTAVIEHMQEWMKNAPEWAQ--GYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAMTPRMARALGRAP 440
            RL+DLWRKYGAV +GTYF +Y   +   Y   D G +         + PS E   ++    +++K    WA+  G +  L    V + +  SF+LAW   K  EP+RL   +A TPR+AR LGRAP
Sbjct:   92 RLKDLWRKYGAVAMGTYFSLYGAVLGSIYLAIDQGWVHTDTGRNSNDKPSDENFDLVSTTNKFVK----WAEDLGIAQYLEVERV-NAKTGSFLLAWIATKFTEPLRLALTVAATPRIARFLGRAP 212          
BLAST of mRNA_Ecto-sp13_S_contig9865.21509.1 vs. uniprot
Match: F0W5K2_9STRA (Uncharacterized protein AlNc14C21G2167 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W5K2_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 4.930e-9
Identity = 46/127 (36.22%), Postives = 68/127 (53.54%), Query Frame = 0
Query:  325 SRLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYGVLT---NLPSEGTA-----VIEHMQEWMKNAPEWAQGYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAMTPRMARALGRAPAKV 443
            +R +DLWRKYG V IGTYF +Y   +   Y   + G+++   N+ S         V+    + +  A ++  G +  L    V   +  SFV+AW   K  EP+RL   +A+TPR+AR LGRAP K+
Sbjct:    4 NRFKDLWRKYGLVAIGTYFTMYGIVLGTIYISIENGLISKNRNVRSNKDTTTDFDVVSTTNKMIALAEDY--GLAKYLDVERVNS-KTGSFVIAWVATKFTEPIRLAITLAITPRIARFLGRAPKKM 127          
BLAST of mRNA_Ecto-sp13_S_contig9865.21509.1 vs. uniprot
Match: A0A6A3TMX1_9STRA (DUF1279 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TMX1_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 5.670e-9
Identity = 45/122 (36.89%), Postives = 59/122 (48.36%), Query Frame = 0
Query:  326 RLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYG---VLTNLPSEGTAVIEHMQEWMKNAPEWAQGYSDRLFGAMVEDHRARS----FVLAWATCKVLEPVRLLGAIAMTPRMARALGRAP 440
            RL+DLWRKYG V IGTY  +Y   +   Y   D G         S+G    +     +    ++ +   D      +E  R  S    F+LAW   K  EPVRL   +A+TPR+AR LGRAP
Sbjct:   66 RLKDLWRKYGVVAIGTYMSMYGVVLGSMYLAIDQGWVHTAKRSSSKGEGQADESFNLVTTTNKFVKIAEDLGIAQYLEVERVNSKTGTFLLAWIATKFTEPVRLAVTLAVTPRIARFLGRAP 187          
BLAST of mRNA_Ecto-sp13_S_contig9865.21509.1 vs. uniprot
Match: A0A8K1C653_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C653_PYTOL)

HSP 1 Score: 66.6 bits (161), Expect = 7.090e-9
Identity = 48/135 (35.56%), Postives = 71/135 (52.59%), Query Frame = 0
Query:  315 QLSDQAKESSSRLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYG-VLTNLPSE-----GTAVIEHMQEWMKN-APEWAQ--GYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAMTPRMARALGRAP 440
            ++ ++ K   S+L++LWR+YG V +GTYF +YF  +   Y   + G V T   S      G A  +       N    WA+  G +  L    V + +  SFV+AW   K  EP+RL   +A+TPR+AR +GRAP
Sbjct:   84 EMVEKGKSGWSKLKELWRQYGMVAVGTYFSMYFTVLGSIYVAIEQGWVSTKRTSRSEGENGEANADFNVVTATNKVVTWAEDMGIAKHLDLQRV-NAKTGSFVIAWVATKFTEPLRLAVTLAITPRIARLVGRAP 217          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9865.21509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNZ5_ECTSI1.120e-26990.02DUF1279 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CLB5_9STRA1.270e-2443.22DUF1279 domain-containing protein (Fragment) n=1 T... [more]
A0A3R7J9G6_9STRA3.900e-1038.33DUF1279 domain-containing protein n=3 Tax=Phytopht... [more]
A0A024GSA6_9STRA5.880e-1039.10DUF1279 domain-containing protein n=1 Tax=Albugo c... [more]
H3GLJ1_PHYRM9.650e-1040.16DUF1279 domain-containing protein n=1 Tax=Phytopht... [more]
D0MUM9_PHYIT1.090e-940.50DUF1279 domain-containing protein n=1 Tax=Phytopht... [more]
M4BYX8_HYAAE3.590e-938.89DUF1279 domain-containing protein n=1 Tax=Hyaloper... [more]
F0W5K2_9STRA4.930e-936.22Uncharacterized protein AlNc14C21G2167 n=1 Tax=Alb... [more]
A0A6A3TMX1_9STRA5.670e-936.89DUF1279 domain-containing protein n=3 Tax=Phytopht... [more]
A0A8K1C653_PYTOL7.090e-935.56Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 282..309
NoneNo IPR availablePANTHERPTHR21377UNCHARACTERIZEDcoord: 288..442
NoneNo IPR availablePANTHERPTHR21377:SF14coord: 288..442
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 358..468
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 334..357
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..333
NoneNo IPR availableTMHMMTMhelixcoord: 334..356
IPR009688Domain of unknown function DUF1279PFAMPF06916DUF1279coord: 326..430
e-value: 2.1E-10
score: 41.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9865contigEcto-sp13_S_contig9865:3046..5746 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9865.21509.1mRNA_Ecto-sp13_S_contig9865.21509.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9865 3046..5746 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9865.21509.1 ID=prot_Ecto-sp13_S_contig9865.21509.1|Name=mRNA_Ecto-sp13_S_contig9865.21509.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=469bp
MAMVARSLGPVQTAVLRRTRLGDGSLLLPASRTIASISGRINKASPKPSR
SLSRRNTYSTSAARGTAPVATMQPIKGPPCVLRSSGDVSGNSATCIRRNL
HCNSGRAVATADWLRPPVGAVLLGQGDASRAGGMPSSGAVNQISTGGHGV
VFLQAAGLRTMSRVFAPATGDAAGKKPGGEAASPSQPGSSNGHGNKTPPS
PSEIRPPAGSGGRGGSNTMDPPAGKPNNPQAAVKATGSIGDNERTVKGGN
PDLREREGTFVEMRDRIRHARADASEDAKDWMRDKRDDMNTMKETLRDAR
RDLRNARRDGTLGAQLSDQAKESSSRLQDLWRKYGAVGIGTYFGIYFGSI
AIFYGIYDYGVLTNLPSEGTAVIEHMQEWMKNAPEWAQGYSDRLFGAMVE
DHRARSFVLAWATCKVLEPVRLLGAIAMTPRMARALGRAPAKVSDADEDE
GSDADDGGGGSRKGGSTR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009688DUF1279