mRNA_Ecto-sp13_S_contig98.21456.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig98.21456.1
Unique NamemRNA_Ecto-sp13_S_contig98.21456.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig98.21456.1 vs. uniprot
Match: D7FKW0_ECTSI (ATG13 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW0_ECTSI)

HSP 1 Score: 1226 bits (3171), Expect = 0.000e+0
Identity = 632/693 (91.20%), Postives = 647/693 (93.36%), Query Frame = 1 
Query:    1 MSSDRSKCEQVVYELLCKVAELVVSSRVSLVQAQRREVNSKFSLHVQELAFVRSSMKAWENNLTLPLGIDIFWVEGGGGDGAPRRELLERWEIMYEAQDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLVHSRDDTGFSLYPLRDGGSCGSGLDFSACGGQDHAGHSGRKSTSCYAFKPLKAPHGSVKVVCHYRRGVDSKAYQHGQTNTLTAAPDMTTSLIPDYVTDEYERNTAASRMPAAEVNHDWPKLPSTVEDGASGPDGAVDTYGQHAGKKVSKENTSTMHWPSPELGHGYAEKRIHVGPRQGPAPFLTPGPHRGRPLG-HDVMMEPLELGPNAEIHARGPPLLPAPPVRQENEDLICVSAQTLSGASGCTESNRGNSHCSNGMIRTAEGGEDGVADRDRALMRPYRRNSISESLSTPSGSSGSRITAGHRHSTATEYTPPFSYNTTGPDLGERNIALGQPLVSFSPPFDAAHVGQRGHDSTISIRVHSSRPRTPVPTVLEVLPESPFGLRKAGTQPPGVPGTAVASSSRPFLPPRLDYSSQEPTFAATSAGIDRIELPFAAEAQDDGVSAAVDSSLYGVEAGFDSSAAPSTLYALCSAASSKSIFLADPS-EYAEHTPVGFLQERDANEAPSPGAAYS---GNLPQEVIVRSLEEDLEGFRLFQQEVLEQRR 2064
            MSSDRSKCEQVVYELLCKVAELVVSSRVSL+Q QRREVNSKFSLHVQELAFVR+SMKAWENNLTLPLGIDIFWVEGGG DGAPRRELLERWEIMYEAQDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSL  SRDDTGFSLYPLRDGGSCGSGLDFSA GG+DHAG SGRKSTSCY FKPLKAPHGSVKV+CHYRRGVDSKAYQHGQTNT+TAAPDMTTSLIPDYVTDEYERN AASRMPA EVNHDWPKLPST EDGAS PDGAVD YGQHAG KVSKENTS MHWPSPELGHGYAEKR H+GPRQGPAPFLTPGPHRGRPLG HDVMMEPLELGPNAEIHARGPP  PAPPVRQENEDLI VSAQTLSGASG TESN  +SHCSNGMIRTAEGGEDGVADR RALMRPYRRNSISESLSTPSGS GSRITAGHRHSTA EYTPPFSYNTTGPDLGERNIALGQPLVSFSPPF+A HVGQRGHDST SIRVHSS PR PVPT+LEVLPESPF LRK GTQPPGVPGTAVASSSRPFLP RLD SSQEPTFAATSAGIDR ELPFAAE QDDGVSA+VDSS+ GVE G DSSAAPSTLYALCSAASSKSIFLADPS EYAE T VGFLQERD+N+ PSPGA Y+   G+LPQEVIVRSLEEDLEGFRLFQQEVLEQRR
Sbjct:    1 MSSDRSKCEQVVYELLCKVAELVVSSRVSLIQPQRREVNSKFSLHVQELAFVRNSMKAWENNLTLPLGIDIFWVEGGG-DGAPRRELLERWEIMYEAQDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLADSRDDTGFSLYPLRDGGSCGSGLDFSASGGEDHAGRSGRKSTSCYTFKPLKAPHGSVKVICHYRRGVDSKAYQHGQTNTVTAAPDMTTSLIPDYVTDEYERNAAASRMPATEVNHDWPKLPSTPEDGASVPDGAVDAYGQHAGNKVSKENTSMMHWPSPELGHGYAEKRTHIGPRQGPAPFLTPGPHRGRPLGRHDVMMEPLELGPNAEIHARGPPHFPAPPVRQENEDLIRVSAQTLSGASGRTESNHVDSHCSNGMIRTAEGGEDGVADRGRALMRPYRRNSISESLSTPSGSGGSRITAGHRHSTAIEYTPPFSYNTTGPDLGERNIALGQPLVSFSPPFNAVHVGQRGHDSTFSIRVHSSGPRAPVPTLLEVLPESPFALRKEGTQPPGVPGTAVASSSRPFLP-RLDCSSQEPTFAATSAGIDRTELPFAAELQDDGVSASVDSSVCGVEGGLDSSAAPSTLYALCSAASSKSIFLADPSSEYAEQTAVGFLQERDSNDVPSPGAEYTSTAGSLPQEVIVRSLEEDLEGFRLFQQEVLEQRR 691
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BLAST of mRNA_Ecto-sp13_S_contig98.21456.1 vs. uniprot
Match: K3WW66_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WW66_GLOUD)

HSP 1 Score: 95.9 bits (237), Expect = 5.440e-17
Identity = 73/230 (31.74%), Postives = 109/230 (47.39%), Query Frame = 1 
Query:   13 RSKCEQVVYELLCKVAELVVSSRVSLV-QAQRREVN--SKFSLHVQELAFVRSSMKAWENNLTLPLGIDIFWVEGGGGDGAPRRELLERWEIMYEAQDAAEGKS--------------------AQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSL-VHSRDDTGFSLYPLRDGGSCGSGLDFSACGGQDHAGHSGRKSTSCYAFKPLKAPHGSVKVVCHYR 630
            R+K +QVV E L K AEL++ SRV+   +A  R  N  ++F+L ++E+ FVR +M AW  ++ LPL I I+ ++ GG D   +R LLE+W +MY A D  +  S                     QL+   K+  +LLR LYS +RLLPA+ + KR     +S  +HS        +  +D                           S Y+F P+  P G +K+   YR
Sbjct:    1 RAKTDQVVLEFLYKAAELIIQSRVNFQSEADHRRGNRRARFNLDIEEVQFVRDAMLAWREDVHLPLTIGIY-LDSGGDD---QRVLLEQWSVMY-APDGGDADSYSGLRRNSSSHLTGAARDVIQQLKEVCKKISVLLRALYSFMRLLPAHRLFKRSYPSTLSYEIHSMSSAFLETHFEKD------------------------VPVSRYSFVPITTPFGFLKISTVYR 201
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BLAST of mRNA_Ecto-sp13_S_contig98.21456.1 vs. uniprot
Match: A0A6H5K5Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Z1_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 7.410e-16
Identity = 37/49 (75.51%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:  166 MKAWENNLTLPLGIDIFWVEGGGGDGAPRRELLERWEIMYEAQDAAEGK 312
            MKAWE +LTLPLGIDIFWVEGGGGDGAP RELLERWEI       A  K
Sbjct:    1 MKAWEKDLTLPLGIDIFWVEGGGGDGAPGRELLERWEITCVVAYGANAK 49
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BLAST of mRNA_Ecto-sp13_S_contig98.21456.1 vs. uniprot
Match: A0A7S3NNL2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNL2_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 6.040e-15
Identity = 57/142 (40.14%), Postives = 80/142 (56.34%), Query Frame = 1 
Query:    4 SSDRSKCEQVVYELLCKVAELVVSSRV-SLVQAQRREVNSKFSLHVQELAFVRSSMKAWENNLTLPLGIDIFWVEGGGGDG-----APRRELLERWEIMYEAQDAA------EGKSAQLRHFFKRSIILLRTLYSLVRLLPA 393
            +S  SKCEQV++E + K AE+V+ +R+ S  Q  RR    +F++ V E+  VR  M+ W  +L LPL I I W E    +        +  LLERW+I +E   A+      E    Q+R  +KR +ILLRTLYS + LLPA
Sbjct:    4 NSAASKCEQVMFEAVAKAAEIVLLNRIHSPSQLGRRLGRQRFNMDVDEVDVVRGMMEYWRRDLHLPLRILIVWRENNSTEKKNILQGTKPRLLERWDIQFELASASLSGPNEEELLVQVRSVWKRVVILLRTLYSRMLLLPA 145
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BLAST of mRNA_Ecto-sp13_S_contig98.21456.1 vs. uniprot
Match: A0A6G0XV64_9STRA (ATG13 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XV64_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.700e-13
Identity = 85/288 (29.51%), Postives = 129/288 (44.79%), Query Frame = 1 
Query:    1 MSSDRSKCEQVVYELLCKVAELVVSSRVSLVQAQRREVNSKFSLHVQELAFVRSSMKAWENNLTLPLGIDIFWVEGGGGDGAPRRELLERWEIMYEAQDAAEGKSA---QLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLVHSRDDTGFSLYPLRDGGSCGSGLDFSACGGQD---HAGHSGRKSTSCYAFKPLKAPHGSVKVVCHYRRGVD---SKAYQHGQTNTLTAAPDMTT------------------SLIPDYVTDEYERNTAASRMPAAEVNH 783
            +S+ + K +QVV E L K  E+V+ SR     +  R   ++F+L +QEL  VR +M+ +++N+T P+ +DIF        GA    LLERW I Y +   A+       QLR   +R  ILLR +Y L R+LPA+ V  R++++       ++D G  L           GL + A G  D          +    Y+F P+  P G++++   YR+  D   +   Q    +  TAA   TT                  ++I DYV        A   MPAA   H
Sbjct:   40 VSTGKKKTDQVVLEFLYKTVEVVLLSRAYFQPSTPRR--ARFNLDIQELVHVRDAMRMYKDNVTQPVLVDIFM-------GAT---LLERWHISYTSGMQAQSPVDVINQLREVCRRIGILLRAVYCLARILPAFPVGDRLKTQ-------QEDLGHPLV----------GLQY-AIGSVDTDMQVQFDAAEPKQRYSFVPIDTPFGTLQLSVLYRKRNDDLLAAIEQMAVADHPTAAATTTTITRELDNVSLKSSTSLENAIIQDYVPTA---PVAVKSMPAALPKH 294
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BLAST of mRNA_Ecto-sp13_S_contig98.21456.1 vs. uniprot
Match: R1FDE6_EMIHU (ATG13 domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FDE6_EMIHU)

HSP 1 Score: 81.3 bits (199), Expect = 3.610e-13
Identity = 85/328 (25.91%), Postives = 130/328 (39.63%), Query Frame = 1 
Query:   10 DRSKCEQVVYELLCKVAELVVSSRVSLVQAQRREVNSKFSLHVQELAFVRSSMKAWENNLTLPLGIDIFWVEG--------GGGDGAPRRELLERWEIMYEAQDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLVHSRDDTGFSLYPLRDGGSCGSGLDFSACGGQDHAGHSGRKSTSC-------------YAFKPLKAPHGSVKVVCHYRRGVDSKAYQHGQTNTLTAAPD--MTTSLIPDYVTDEYERNTAASRMPAAEVNHDWPKLPSTVEDGASGPDGAVDTYGQHAGKKVSKENTSTMHWPSPELG 924
            +  K + VV   + K  ELV+ +RV L    R   N  F+L  +E+A VR  ++ W+  ++ PL +DIF            G     P   LLERW + YE    A  ++     F+KR ++LLR+L + +RL+PA+    R+ S    L H+ D                  L F  C G  H G S   S                +AF P  + HG +++   YR               +  + D  M+ +LI +Y+  E  R                P   +T+++ A G DG+   +G      +     S  H PSP  G
Sbjct:    2 EAQKLQLVVRNCVQKTLELVLRARVPL---GRGTPNHWFNLESEEVACVRDRLEGWKQRISQPLQLDIFIDTSSSAVRAAVGAQPNEPNLVLLERWTLRYEPAPHAP-EAIGWPTFYKRFMVLLRSLAAFLRLMPAH----RLASSLGRLGHASDAPA---------------LGFRVCIGGPHGGRSSEASPEAAPLDFAAGVSPQQHAFSPPDSTHGKLRIAVSYRPPSLFTRTARPAAAAVRCSSDRMMSAALIANYLPTEGARQ---------------PPAVATLDEAALGADGSNPRFG------LLPRPASAPHAPSPPAG 285
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BLAST of mRNA_Ecto-sp13_S_contig98.21456.1 vs. uniprot
Match: A0A485LN19_9STRA (Aste57867_23525 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LN19_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 4.070e-13
Identity = 65/219 (29.68%), Postives = 102/219 (46.58%), Query Frame = 1 
Query:    1 MSSDRSKCEQVVYELLCKVAELVVSSRVSLVQAQRREVNSKFSLHVQELAFVRSSMKAWENNLTLPLGIDIFWVEGGGGDGAPRRELLERWEIMYEAQDAAEGKSA-----QLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLVHSRDDTGFSLYPLRDGGSCGSGLDFSACGGQDHAGHSGRKSTSCYAFKPLKAPHGSVKVVCHYRRGVD 642
            +S+ + K +QVV E L K  E+V+ SR        R   ++F+L +QEL  VR S++ + +N+  PL +DIF              LLERW I Y +    + KS      QLR   +R  ILLRT+Y LVR+LPA+ V  R++++   L H      +++                A            +    Y+F P++ P G +++   YR+  D
Sbjct:   38 LSTGQKKTDQVVLEFLYKTVEVVLLSRAYFQPTTPRR--ARFNLDIQELTHVRESLRPYRDNVGQPLFLDIFMGS----------TLLERWHISYTS--GMQSKSPVDVINQLREVCRRIGILLRTVYCLVRILPAFPVGTRLKTQQEDLGHVVAGLQYAV---------------GAVDADMRQQFDAAEPKQRYSFVPIETPFGMIQLSVLYRKRND 227
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BLAST of mRNA_Ecto-sp13_S_contig98.21456.1 vs. uniprot
Match: A0A2P6NID3_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NID3_9EUKA)

HSP 1 Score: 80.9 bits (198), Expect = 3.220e-12
Identity = 42/140 (30.00%), Postives = 81/140 (57.86%), Query Frame = 1 
Query:   13 RSKCEQVVYELLCKVAELVVSSRVSLVQAQRR------EVNSKFSLHVQELAFVRSSMKAWENNLTLPLGIDIFWVEGGGGDGAPRRE--LLERWEIMYEAQDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHK 408
            R+K EQ+V EL  K+ ++++ SR+ +VQ   +      ++N  F+L ++E+  +   +  W  N+ +PL I +F+    G    P  E  +LE+W+I  E     + ++ ++   +KR ++L+R+LYS +R++P YSV +
Sbjct:   13 RTKTEQIVRELYVKLTQVILQSRIPMVQQAAKNGTGKVKINKWFNLELEEVENITQELTPWRQNMYIPLCIKVFFNSSRGMAQHPYEERVMLEKWKIQLEPH-TGQRENVEVPVLYKRLVLLVRSLYSYLRVVPTYSVFR 151
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BLAST of mRNA_Ecto-sp13_S_contig98.21456.1 vs. uniprot
Match: A0A5N6P6K0_9ASTR (ATG13 domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P6K0_9ASTR)

HSP 1 Score: 79.3 bits (194), Expect = 1.050e-11
Identity = 70/293 (23.89%), Postives = 118/293 (40.27%), Query Frame = 1 
Query:    7 SDRSKCEQVVYELLCKVAELVVSSRVSLVQA-----------QRREVNSKFSLHVQELAFVRSSMKAWENNLTLPLGIDIFWVE-------GGGGDGAPRRELLERWEIMYEAQDAAEGK--SAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLVHSRDDTGFSLYPLRDGGSCGSGLDFSACGGQDHAGHSGRKSTSCYAFKPLKAPHGSVKVVCHYRRGVDSKAYQHGQTNTLTAAPDMTTSLIPDYV----TDEYER---NTAASRMPAAEVN-----HDW 789
            ++  + +Q+V + L K   +V+ SRV  +++           Q ++ +  F+L + E       +  W  NL  P+ IDI  V+        G G G     ++ERW + YE          S   +  +K+SIILLR+LY+++RLLPAY  ++++ S+                    G  CG  + +           S  +    Y F P++A HG + +   YR  +            L  +      +I DYV    TD +     N AA+  P  + +     H W
Sbjct:    9 NEHGRNDQIVSQFLLKSLHIVLESRVPSIRSNGRGGSLSSGGQVKKSDKWFNLALGERLTPLDCLSFWHRNLMEPMIIDIVLVQDMPDLGQNGSGYGTLVETVIERWVVQYEYSRTPPSHQLSESYKKTYKKSIILLRSLYTMMRLLPAYRAYRKLSSK--------------------GRDCGFDIVYKVSSFSAPFSRSEEQMMKLYTFVPVEAQHGHLSISVRYRESLSDF--------NLETSASFPPEIIIDYVGSPATDPFRAFPDNKAATSFPNRDTSRLQRPHSW 273
[Close]
BLAST of mRNA_Ecto-sp13_S_contig98.21456.1 vs. uniprot
Match: A0A328E0K3_9ASTE (ATG13 domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328E0K3_9ASTE)

HSP 1 Score: 77.4 bits (189), Expect = 3.940e-11
Identity = 46/144 (31.94%), Postives = 78/144 (54.17%), Query Frame = 1 
Query:   10 DRSKCEQVVYELLCKVAELVVSSRVSLVQAQRREVNSK-----FSLHVQELAFVRSSMKAWENNLTLPLGIDIFWVEGGGGDGAPRRELLERWEIMYEAQ--DAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQS 420
            +  + EQ+V + L K   +V+ SRV  ++   R    K     F+L + +      ++ +W  NLT P+ IDI  V+   G G+    ++ERW + YE +    ++G  +  +  +K+ IILLR+LYS+ +LLPAY   K++ S
Sbjct:   10 EHGRFEQIVSQFLSKSLHIVLDSRVPSIRNHGRTGEVKKSDKWFNLVLGDRPSALENLNSWHRNLTEPMNIDIVLVKDKPGSGSSLT-VIERWIVQYECRRTSISQGVDSSHKKTYKKLIILLRSLYSMTKLLPAYKAFKKLCS 152
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig98.21456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKW0_ECTSI0.000e+091.20ATG13 domain-containing protein n=1 Tax=Ectocarpus... [more]
K3WW66_GLOUD5.440e-1731.74Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6H5K5Z1_9PHAE7.410e-1675.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3NNL2_9STRA6.040e-1540.14Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6G0XV64_9STRA1.700e-1329.51ATG13 domain-containing protein n=1 Tax=Aphanomyce... [more]
R1FDE6_EMIHU3.610e-1325.91ATG13 domain-containing protein n=2 Tax=Emiliania ... [more]
A0A485LN19_9STRA4.070e-1329.68Aste57867_23525 protein n=1 Tax=Aphanomyces stella... [more]
A0A2P6NID3_9EUKA3.220e-1230.00Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A5N6P6K0_9ASTR1.050e-1123.89ATG13 domain-containing protein n=2 Tax=Mikania mi... [more]
A0A328E0K3_9ASTE3.940e-1131.94ATG13 domain-containing protein n=3 Tax=Cuscuta se... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig98contigEcto-sp13_S_contig98:32978..38524 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1229.5
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FKW0
Preferred nameATG13
Model size2067
KEGG koko:K08331
KEGG Pathwayko04136,ko04138,ko04140,ko04211,map04136,map04138,map04140,map04211
Hectar predicted targeting categoryother localisation
GOsGO:0000045,GO:0000407,GO:0000422,GO:0001932,GO:0001934,GO:0002790,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005776,GO:0005829,GO:0006810,GO:0006914,GO:0006996,GO:0007005,GO:0007033,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009306,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016236,GO:0016237,GO:0019207,GO:0019220,GO:0019222,GO:0019887,GO:0019898,GO:0022411,GO:0022607,GO:0030234,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0032147,GO:0032258,GO:0032268,GO:0032270,GO:0032940,GO:0032991,GO:0033036,GO:0033365,GO:0033674,GO:0034497,GO:0034613,GO:0034727,GO:0042325,GO:0042327,GO:0042886,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043549,GO:0044085,GO:0044093,GO:0044237,GO:0044248,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0044804,GO:0044805,GO:0045184,GO:0045859,GO:0045860,GO:0045937,GO:0046903,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051641,GO:0060255,GO:0061695,GO:0061726,GO:0061919,GO:0065007,GO:0065009,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0072665,GO:0080090,GO:0098772,GO:1902494,GO:1902554,GO:1902911,GO:1903008,GO:1905037,GO:1990234,GO:1990316
Exons10
EggNOG free text desc.process utilizing autophagic mechanism
EggNOG OGsKOG4573@1,KOG4573@2759
Cds size2067
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig98.21456.1prot_Ecto-sp13_S_contig98.21456.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig98 32978..38524 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464244.2480521-CDS-Ecto-sp13_S_contig98:32977..330461681464244.2480521-CDS-Ecto-sp13_S_contig98:32977..33046Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 32978..33046 -
1681464244.2684228-CDS-Ecto-sp13_S_contig98:33287..334201681464244.2684228-CDS-Ecto-sp13_S_contig98:33287..33420Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 33288..33420 -
1681464244.278176-CDS-Ecto-sp13_S_contig98:33865..340021681464244.278176-CDS-Ecto-sp13_S_contig98:33865..34002Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 33866..34002 -
1681464244.2875366-CDS-Ecto-sp13_S_contig98:34191..347131681464244.2875366-CDS-Ecto-sp13_S_contig98:34191..34713Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 34192..34713 -
1681464244.300655-CDS-Ecto-sp13_S_contig98:35486..356761681464244.300655-CDS-Ecto-sp13_S_contig98:35486..35676Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 35487..35676 -
1681464244.3118753-CDS-Ecto-sp13_S_contig98:36017..363851681464244.3118753-CDS-Ecto-sp13_S_contig98:36017..36385Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 36018..36385 -
1681464244.3210928-CDS-Ecto-sp13_S_contig98:36547..367961681464244.3210928-CDS-Ecto-sp13_S_contig98:36547..36796Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 36548..36796 -
1681464244.3319685-CDS-Ecto-sp13_S_contig98:37164..372821681464244.3319685-CDS-Ecto-sp13_S_contig98:37164..37282Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 37165..37282 -
1681464244.345994-CDS-Ecto-sp13_S_contig98:38020..381781681464244.345994-CDS-Ecto-sp13_S_contig98:38020..38178Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 38021..38178 -
1681464244.3561447-CDS-Ecto-sp13_S_contig98:38401..385241681464244.3561447-CDS-Ecto-sp13_S_contig98:38401..38524Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 38402..38524 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig98.21456.1

>prot_Ecto-sp13_S_contig98.21456.1 ID=prot_Ecto-sp13_S_contig98.21456.1|Name=mRNA_Ecto-sp13_S_contig98.21456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=689bp
MSSDRSKCEQVVYELLCKVAELVVSSRVSLVQAQRREVNSKFSLHVQELA
FVRSSMKAWENNLTLPLGIDIFWVEGGGGDGAPRRELLERWEIMYEAQDA
AEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLVHSRD
DTGFSLYPLRDGGSCGSGLDFSACGGQDHAGHSGRKSTSCYAFKPLKAPH
GSVKVVCHYRRGVDSKAYQHGQTNTLTAAPDMTTSLIPDYVTDEYERNTA
ASRMPAAEVNHDWPKLPSTVEDGASGPDGAVDTYGQHAGKKVSKENTSTM
HWPSPELGHGYAEKRIHVGPRQGPAPFLTPGPHRGRPLGHDVMMEPLELG
PNAEIHARGPPLLPAPPVRQENEDLICVSAQTLSGASGCTESNRGNSHCS
NGMIRTAEGGEDGVADRDRALMRPYRRNSISESLSTPSGSSGSRITAGHR
HSTATEYTPPFSYNTTGPDLGERNIALGQPLVSFSPPFDAAHVGQRGHDS
TISIRVHSSRPRTPVPTVLEVLPESPFGLRKAGTQPPGVPGTAVASSSRP
FLPPRLDYSSQEPTFAATSAGIDRIELPFAAEAQDDGVSAAVDSSLYGVE
AGFDSSAAPSTLYALCSAASSKSIFLADPSEYAEHTPVGFLQERDANEAP
SPGAAYSGNLPQEVIVRSLEEDLEGFRLFQQEVLEQRR*
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mRNA from alignment at Ecto-sp13_S_contig98:32978..38524-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig98.21456.1 ID=mRNA_Ecto-sp13_S_contig98.21456.1|Name=mRNA_Ecto-sp13_S_contig98.21456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5547bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98:32978..38524- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCAGCGATAGGTCCAAATGCGAACAAGTTGTCTATGAGCTGCTCTG
CAAGGTCGCAGAACTTGTCGTTTCCAGCAGAGTTTCGTTAGTTCAAGCAC
AGCGACGCGAGGTCAACAGTAAGGTGAGACCGCTGCAAGTGCTAGAAGTG
CCACACCTTGGCTCCATTGGTGAGCGTCAGCCCACGCTCAGGCTACAGGG
ATCTAGGAATTAACATGAAATTGTACTTTGAACCGAAGGTGATTTGTACA
TAGTATACATATTGAGACACTGAGGTACGGGAGTCCCCCCCAAGTTTATA
CCCTTCGCTCGTCGATCGTATCCTCGTGCGTCGTTTCATCAAGCAGTTCT
CTCTGCACGTACAAGAGCTAGCGTTTGTGAGAAGCTCCATGAAAGCATGG
GAAAACAACCTCACGCTGCCTCTTGGTATTGACATATTTTGGGTCGAGGG
TGGAGGAGGAGACGGGGCCCCTCGCCGCGAGCTGCTGGAGCGATGGGAGA
TCATGTGCGTCGTTGTGTACGGAAAATGTCCTACGCCCTTTCGGAGGTTT
CTTATTATAGTAGAAGTCATAGCAAAGCTGGTCATGTGTGGTTCAATGTT
AGCCTCGAACATAGCACACCGTTGTTATCGCATGCATGGGACGAACTGGA
TTGCGAAAGTGCTTCTTACCTCGCTATGAGTTTTCAGTTCGAAGGAGGCG
AACGCGAAGCAGGAAGGCGTGTGAGGCGTAGCGGAGAATTTTTTGTGAGG
TTGTACAATCAATTGGATACACGACATACGATGGCGAATTTGATACGGGG
GAATCTGTATGTGTTCGTGAGAGTGTGCGTTTCGTGGTTCTGTCTCTCTT
GTTCCCTGTCTCTTGTTCTCGTTCTCCCTCTCTCCTGTCTGTCTGTCGTG
TGTTGACCCTTACATATTCTCAAGACATTTACTGTAGTTTTTCACACACA
CCCTCCACCGTTCTCATCTCGATCGTAACCGGAGGTTGTGAGAACGGGGC
GTTACGTGCAAGAAACGCTCTTGACGCTACTACATTGATGGCCCAAGTGA
ACATTTTTGGAATCGGCACACTTTTGGGCCTGAATCAATTAAATATATTT
TTAACAGCGGTCCCTCTACAGCATGGGTGGCGATGCCTCGTAGTCTGACG
GAATTTGCTTAACGGGAACATGGTGTCACGAATAGCCCGCTGGTCTCGAG
AGCAGCAAGCATCACGTTGTCCGAATGTTTGTACCGTGGCAGGTACGAGG
CGCAAGATGCAGCAGAGGGCAAATCTGCTCAGCTGAGGCACTTCTTCAAA
CGATCCATTATCCTTCTTCGCACTCTTTACTCTCTCGTGCGGTTGCTGCC
AGCTTACAGCGTGAGTGGGAACTAATATTGTTGAGAGTTATCTGCACGAA
TGCGTGGTCTGTTTGGGTGATAATAGTTACGATATGATGCAGATTTCCGA
ACCCCGCATACTGCGTACGAGACACCTCCAACATTGGCTTTGTTCAACAC
AGAGGTCAAGAGGTCTCCTCCACTGTCGAACACCAAATCCACAGCTATGC
AAGTCATCCGGAACACACATCTTGTATTCAGGCAAAAGCCTTGGCCCGAA
CGTGCCCCGTGGACGGGTATCCGCACGAACAGCTTCCCTGACAATGGCGC
CTGAAAATGGCGATATCCATGAAGAATCTGGCTGAAATATGCAGCTCGCC
TCCCGCCATCCTGTTGATTTTGACAAAGGTTCACAAACGGATCCAGAGCA
GGGATGTGTCTTTGGTACATTCAAGAGACGACACGGGTTTCTCCCTGTAC
CCCTTGCGTGATGGAGGTAGCTGCGGATCAGGTCTGGACTTCAGCGCTTG
TGGCGGTCAAGACCATGCAGGTCACAGTGGCCGGAAGTCGACGAGCTGCT
ACGCCTTCAAGCCTTTAAAGGCACCACACGGCAGTGTGAAGGTCGTCTGT
CACTACCGAAGAGGTGTGGATTCAAAGGTGCGCTGAGCTTAGTGTACGAA
ACGTCGCGCTTTTATCCGTGTCATCCTTCACGCGTTTGTCACCTGTTGTG
TCGGTATGGCGTGCGCCCGTTAACCACTGTTAGTTGGTATCATTCTGAAA
GGTGTCTTGTTCCTATCCGTCTGTATGACTCTTCGTCAGGCTTATCAGCA
CGGACAAACCAACACCCTTACTGCTGCGCCCGATATGACGACTTCGCTCA
TCCCGGACTATGTAACGGACGAGTATGAGAGAAACACCGCAGCCTCGAGG
ATGCCAGCAGCGGAAGTGAACCACGACTGGCCAAAGCTGCCCAGCACGGT
TGAAGACGGAGCTTCGGGGCCGGACGGTGCTGTCGATACGTATGGCCAGC
ACGCCGGGAAGAAAGTCTCGAAAGAGAATACTTCTACGATGCATTGGCCC
TCTCCGGAACTGGGGCATGGGTACGCGGAGAAGCGAATACATGTTGGACC
ACGCCAAGGTCCAGCACCGTTTTTGACTCCTGGGCCACATCGCGGACGGC
CGCTTGGGTGAGGAAATGCTCTCTCTCTGTTTAATGTATTCGGCAGAAAC
CAGGGCCCATTGGTGTAATATGTTTCATCCATCGTAAAACACTGGCATGT
ATCGATCTGTGATAGCTTTTGTATGGAACAGCTGTGCAAGTTTGGGCTTG
AGTAGCTTGAGCAACAGAACATGTGACACATCATTCTCTGTGTCGCGTAC
ACTGTTCACCGAGGGCGGTCTTTGCACTTTGGGTTCACAGCTGTCTCTCA
TGCACTTTGCAGTGAGATGCAGCAACGTCCATCCAGCGTAGGGCTGCTGT
TAAAAATTGATGAACGTTGCTGAATGATTCATTTTCAAATTTAACAAGGC
ACGACGTCATGATGGAGCCACTGGAGTTGGGGCCAAACGCTGAAATCCAT
GCTCGAGGGCCCCCGCTTTTACCAGCTCCTCCTGTGCGGCAGGAAAATGA
AGATCTCATATGCGTTTCTGCACAAACCCTATCGGGTGCCAGCGGATGCA
CGGAGTCGAACCGTGGTAATTCTCATTGCAGCAATGGGGTAAGCTGATTG
ATGGCAATAATCCATTTGTTTCCACCATTTCTTGTATTCCACCCCGGTCC
ACATTACAGGCGACCTTGGGTAGATTCGCTCTTGGTGCAACATGTACTTT
GAAGGTGTAGACTAACTACAATAACCAGACCAGTGGAGGGGGTGGGCGGT
GCAAATGAATGCCAGGGGTGGACCGGGGACACCGTAATAATGACAGCATT
AGATGGAAAAATTTTCCACTCTCTGGATATCGCCGTAACCCAAGCCCTTC
GATTGCTATCAGCGAACAAATCTGCAATCGCGTTCGTCCTCTCAGATTCG
TTAAGGTTTCTCTGCAGTATTGGGGAACGATTTCAGTCGCAGACATGAAC
CCTCATGCTTCTAGATGACAATTTCCTGCCAATTCGCAGGCGCGCGCTCC
GTTTACTGTTGCCCAGGCGGTGGCTATTGGTGACACACCAGATGTTCTTT
CAAAATTTGGTTTGGTGGATGTTACGGGATGGGTAAATCACGGGCATTGA
GAGGCTTGAATCCAAAATCCAAAAGTCACATTTCCGCACAAAGTGCCACA
ATTTCTTGTAATGTCCCCATAGTTGCTGACCAGAGTGGTACCCGGCAACT
TGTGCGCCAAGATGCAATATACCCGCGTAGACGAGCGGTACATTACGGCG
AACGTTTGGCCGATACAAGGTATGACTAGAGGATCAGGCTCCTGTCAAAT
CCAAGCATCCTCTCTTGCGGAGAGTTCCTCAGGAGTGTCCCGGTTCTGCG
ACGCCGTGCAGATGATTCGGACAGCAGAGGGAGGAGAGGACGGAGTTGCT
GATCGAGACAGAGCACTCATGCGGCCATACAGGCGGAATTCAATCAGCGA
ATCGCTTTCAACGCCGTCAGGGTCTAGTGGCTCTCGCATCACAGCAGGGC
ATCGGCACAGCACGGCAACCGAGTACACTCCGCCATTTTCGTACAACACC
ACTGGGCCTGATCTTGGCGAACGAAACATTGCCCTGGGTCAGCCCTTGGT
TAGCTTCAGTCCTCCGTTTGACGCCGCACACGTCGGCCAGAGGGGTCATG
ACAGCACTATCAGCATAAGGGTACATTCATCTAGACCACGAACCCCGGTG
CCTACCGTCCTCGAAGTGCTGCCAGAATCTCCTTTTGGGTTGAGGAAGGC
AGGTACTCAACCCCCTGGTGTCCCGGGGACGGCGGTTGCTTCGTCGTCGC
GGCCGTTCCTACCGCCAAGATTGGACTATAGTAGTCAGGAACCAACGTTT
GCTGCAACAAGTGCTGGCATTGACAGAATTGAGGTGAGTTCGTGCCTTCA
ATCCGATTGTGCCACGGCCTCCAGTTAGACTCCTCTGGCATTTTTTGCCT
AACTCGTCGTCAGGCGTTTGCTGCAGCATCTATCAAGTAGTGCCTTTCTC
GTCCTCAGTTCTTCTGTGCGGGAATAACCGATTGCCTGGCGTTCATGGAT
GAACTACTGGCTGGCGTTCCAGCTACCTTTTGCGGCAGAAGCGCAAGATG
ATGGAGTATCAGCGGCTGTGGATTCCAGCCTCTATGGTGTGGAGGCTGGG
TTCGACTCCTCTGCCGCTCCGTCGACGCTGTACGCGTTGTGCTCGGCTGC
GTCCTCCAAGTACGTCGTTTGGGTTTCCCTATTCTTGCAGATCGTGTCGG
ATTGTCCGTTGCATGGTTAGACTTTCGTTTAATTTTCTTCCAGTATACAC
GAGTCCGTGGCATGGACCATTTTGGAACACAACCTTTAGAAAATTGCCGC
CCAACGAGCAAATGACACAGTGGCCCGTAGTTGAGAGAGTTATTTGAACC
GGGGAAAGGGGGGACTGTGGTGATCAATGATACCTCTGGTACGTACCGAT
CGAGACGACAGCATTTCAAGAGGTAGAGCCAGGAAGGTAAATAGTTTCGA
CGTGCCTGCGTAGGATCTGATACTTCGTGACGTGCCCACAACCAGCCTTT
TCGTCCTCTGTGTCTCGGTTCATGAATCCGTGTAGCCAACCTTCGTGAGG
GTGAGTGGGCGTCAGTACATGCTTTTGCTGTGTGCTCTTTCGTGGGCTCC
GCAGGTCTATTTTCTTGGCGGACCCATCCGAATATGCCGAGCACACGCCA
GTCGGCTTTTTACAGGAGCGTGATGCCAACGAGGCTCCTTCCCCCGGCGC
AGCGTACAGCGGGAATCTACCGCAGGAGGTTATCGTGGTAAGGAGTTAGC
GGCTAAGCTCGCACGTCCCGGACGTCTGTGAGTTGGCATCATGAGCATCA
TCATCACTGTGGCGCTCACGCGTTTTGTGCTGCTGGAGCGCAGCTTCCTC
GTACAAACCACATTTCGGTGGATTCGCGATACACTCGCTTGCCACAACGT
CAGCATCATTTTCTGTCCTTCACCACATACCCCCTCTTCCGATGCCCACG
CCCGTGTGATTGGTGTTTCGTATGCCAGCGCTCGTTGGAAGAAGATCTGG
AGGGATTCAGGCTATTTCAACAAGAAGTTCTTGAGCAAAGACGCTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig98:32978..38524-

>mRNA_Ecto-sp13_S_contig98.21456.1 ID=mRNA_Ecto-sp13_S_contig98.21456.1|Name=mRNA_Ecto-sp13_S_contig98.21456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2067bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98:32978..38524- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCAGCGATAGGTCCAAATGCGAACAAGTTGTCTATGAGCTGCTCTG
CAAGGTCGCAGAACTTGTCGTTTCCAGCAGAGTTTCGTTAGTTCAAGCAC
AGCGACGCGAGGTCAACAGTAAGTTCTCTCTGCACGTACAAGAGCTAGCG
TTTGTGAGAAGCTCCATGAAAGCATGGGAAAACAACCTCACGCTGCCTCT
TGGTATTGACATATTTTGGGTCGAGGGTGGAGGAGGAGACGGGGCCCCTC
GCCGCGAGCTGCTGGAGCGATGGGAGATCATGTACGAGGCGCAAGATGCA
GCAGAGGGCAAATCTGCTCAGCTGAGGCACTTCTTCAAACGATCCATTAT
CCTTCTTCGCACTCTTTACTCTCTCGTGCGGTTGCTGCCAGCTTACAGCG
TTCACAAACGGATCCAGAGCAGGGATGTGTCTTTGGTACATTCAAGAGAC
GACACGGGTTTCTCCCTGTACCCCTTGCGTGATGGAGGTAGCTGCGGATC
AGGTCTGGACTTCAGCGCTTGTGGCGGTCAAGACCATGCAGGTCACAGTG
GCCGGAAGTCGACGAGCTGCTACGCCTTCAAGCCTTTAAAGGCACCACAC
GGCAGTGTGAAGGTCGTCTGTCACTACCGAAGAGGTGTGGATTCAAAGGC
TTATCAGCACGGACAAACCAACACCCTTACTGCTGCGCCCGATATGACGA
CTTCGCTCATCCCGGACTATGTAACGGACGAGTATGAGAGAAACACCGCA
GCCTCGAGGATGCCAGCAGCGGAAGTGAACCACGACTGGCCAAAGCTGCC
CAGCACGGTTGAAGACGGAGCTTCGGGGCCGGACGGTGCTGTCGATACGT
ATGGCCAGCACGCCGGGAAGAAAGTCTCGAAAGAGAATACTTCTACGATG
CATTGGCCCTCTCCGGAACTGGGGCATGGGTACGCGGAGAAGCGAATACA
TGTTGGACCACGCCAAGGTCCAGCACCGTTTTTGACTCCTGGGCCACATC
GCGGACGGCCGCTTGGGCACGACGTCATGATGGAGCCACTGGAGTTGGGG
CCAAACGCTGAAATCCATGCTCGAGGGCCCCCGCTTTTACCAGCTCCTCC
TGTGCGGCAGGAAAATGAAGATCTCATATGCGTTTCTGCACAAACCCTAT
CGGGTGCCAGCGGATGCACGGAGTCGAACCGTGGTAATTCTCATTGCAGC
AATGGGATGATTCGGACAGCAGAGGGAGGAGAGGACGGAGTTGCTGATCG
AGACAGAGCACTCATGCGGCCATACAGGCGGAATTCAATCAGCGAATCGC
TTTCAACGCCGTCAGGGTCTAGTGGCTCTCGCATCACAGCAGGGCATCGG
CACAGCACGGCAACCGAGTACACTCCGCCATTTTCGTACAACACCACTGG
GCCTGATCTTGGCGAACGAAACATTGCCCTGGGTCAGCCCTTGGTTAGCT
TCAGTCCTCCGTTTGACGCCGCACACGTCGGCCAGAGGGGTCATGACAGC
ACTATCAGCATAAGGGTACATTCATCTAGACCACGAACCCCGGTGCCTAC
CGTCCTCGAAGTGCTGCCAGAATCTCCTTTTGGGTTGAGGAAGGCAGGTA
CTCAACCCCCTGGTGTCCCGGGGACGGCGGTTGCTTCGTCGTCGCGGCCG
TTCCTACCGCCAAGATTGGACTATAGTAGTCAGGAACCAACGTTTGCTGC
AACAAGTGCTGGCATTGACAGAATTGAGCTACCTTTTGCGGCAGAAGCGC
AAGATGATGGAGTATCAGCGGCTGTGGATTCCAGCCTCTATGGTGTGGAG
GCTGGGTTCGACTCCTCTGCCGCTCCGTCGACGCTGTACGCGTTGTGCTC
GGCTGCGTCCTCCAAGTCTATTTTCTTGGCGGACCCATCCGAATATGCCG
AGCACACGCCAGTCGGCTTTTTACAGGAGCGTGATGCCAACGAGGCTCCT
TCCCCCGGCGCAGCGTACAGCGGGAATCTACCGCAGGAGGTTATCGTGCG
CTCGTTGGAAGAAGATCTGGAGGGATTCAGGCTATTTCAACAAGAAGTTC
TTGAGCAAAGACGCTGA
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