mRNA_Ecto-sp13_S_contig98.21455.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig98.21455.1
Unique NamemRNA_Ecto-sp13_S_contig98.21455.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig98.21455.1 vs. uniprot
Match: D7FKW1_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW1_ECTSI)

HSP 1 Score: 454 bits (1168), Expect = 1.000e-160
Identity = 248/251 (98.80%), Postives = 250/251 (99.60%), Query Frame = 1
Query:    1 MSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFVHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHVLDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDEDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIYV 753
            MSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSF HIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEH+LDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALD+DMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIYV
Sbjct:    1 MSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIYV 251          
BLAST of mRNA_Ecto-sp13_S_contig98.21455.1 vs. uniprot
Match: A0A7S3K6G0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6G0_9STRA)

HSP 1 Score: 199 bits (507), Expect = 3.370e-60
Identity = 111/232 (47.84%), Postives = 164/232 (70.69%), Query Frame = 1
Query:    7 LNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFVHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHVLDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDEDMDEATESMNFVMGRLGKLLKTKSKCQIWTI 702
            L S ASHDPFY V+DE+  K+E I  RLER+++LL   NTA + +F++++KGL++EVK A+AQ++DL  TVEYVE +R++F HID+ EL ERK F++ +K  L  A D L G + + K+  D++ ++A  R  G+ GA+T++E  NT+ + +  ++ R  +  QDE+LE L + V+RV   AT I+ EL++Q+RL+  L+ +MDE TE MNFVMG+L KLLKTK  CQ+ TI
Sbjct:   12 LMSAASHDPFYVVKDELVNKLESISSRLERYENLLWKINTAASVEFKEVKKGLSREVKAAEAQIKDLALTVEYVEKDRNAFAHIDDRELDERKKFIATTKNKLSGARDVLTGPKARAKIEADEKQQLAATR--GNYGAKTDIEMANTDFIHNQHAQTRTIMQEQDENLEHLDSAVDRVHRMATEIHGELKTQSRLIGDLENEMDETTEKMNFVMGKLAKLLKTKDTCQLLTI 241          
BLAST of mRNA_Ecto-sp13_S_contig98.21455.1 vs. uniprot
Match: A0A7S2S2M2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2M2_9STRA)

HSP 1 Score: 198 bits (503), Expect = 9.370e-60
Identity = 109/233 (46.78%), Postives = 160/233 (68.67%), Query Frame = 1
Query:   19 ASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFVHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHVLDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDEDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSF 717
            A+ DPFY V+DE++AK+  I+ RL+ F+ LL  T+TA N+DF+D +K L +++K A+ QL+DL  TVE+V+ +R  F HID+ +L +R T+++++KQ L        G   K K+A D R ++ K  +  +LGA +    +NT  +   Q++ RM + +QDEDLEELG  V+RV + A  IN EL++QNR+L  L+ D+DEATE MNFVMG+L KLLKTK  CQIWT+++L F
Sbjct:    3 AAQDPFYVVKDELTAKVHTIQKRLQTFKRLLETTDTATNQDFKDSKKALGRDLKAAEKQLKDLTLTVEFVQKDRAQFAHIDDYDLQQRTTYIAETKQALGEIKAYYSGDDVKRKLADDMRKDIMKQPT-SNLGATSSDAMENTHFIQGQQAQQRMIMEQQDEDLEELGYAVDRVNDMAVGINTELKTQNRMLKDLESDLDEATEKMNFVMGKLAKLLKTKDTCQIWTVIILFF 234          
BLAST of mRNA_Ecto-sp13_S_contig98.21455.1 vs. uniprot
Match: A0A7S2FMQ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FMQ2_9STRA)

HSP 1 Score: 189 bits (479), Expect = 3.900e-56
Identity = 104/231 (45.02%), Postives = 160/231 (69.26%), Query Frame = 1
Query:   19 ASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFVHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHVLDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDEDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLL 711
            AS DPFY V+DE+S KI+ I  +  +F +LL++TNTA++ +F+D R+ L K++K A+ QLRDL  TV+ V+ +R+ F HID+ EL +R  ++  +++ L        G++ K KM  D+R+E+ + +    LGA    E +NT+ + + Q++ +M + +QDE+LEELG  V+RV + A  INEEL+ QN++L  L+ED+DEA E MNFVMG++ KLLKTK  CQIWT+++L
Sbjct:    3 ASVDPFYVVKDELSMKIDAITGKTVKFLELLDSTNTAKSPEFKDARRSLGKDLKSAEKQLRDLTFTVDMVQKDREQFAHIDDYELEQRDAYIKKARKNLNEMKSTYQGERVKRKMIADERAEI-ESKPMSSLGATNSDEAENTQFIHEQQAQGQMIIRQQDEELEELGYAVDRVNDMAVGINEELKVQNQMLKTLEEDIDEAAEKMNFVMGKMAKLLKTKDTCQIWTVIIL 232          
BLAST of mRNA_Ecto-sp13_S_contig98.21455.1 vs. uniprot
Match: F0XYP6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYP6_AURAN)

HSP 1 Score: 182 bits (462), Expect = 1.960e-53
Identity = 104/249 (41.77%), Postives = 174/249 (69.88%), Query Frame = 1
Query:    7 LNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNT-AQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFVHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHVLDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDEDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIY 750
            L S  ++DPF+ V+DE+ AK+E I++R+ +F  LL    T A ++ F+D RK L +E++GA+ QL+DL  TV+YVE +R +F HID+ ELSER+ F++ ++  +  A DA+ G + + KM  DD++ +A  +  GD GA T++E  NT+ +   ++R +  +  QD++LE+L   V+RV   A+ I+ EL++Q+R++  ++ ++DE TE MNFVMG+L KLLKTK  CQ+WTI+ L+ +L+++V+++I+
Sbjct:   10 LMSGGANDPFHVVKDELVAKLESIELRVGQFNGLLYGPGTTAGSKPFRDCRKALGREIRGAEGQLKDLGLTVDYVERDRGAFSHIDDRELSERRDFVAAARSRVANARDAVGGPRARAKMDADDKAAVAAQQ--GDYGASTDLEMANTDFIHGQRARTQATMREQDDNLEQLDGAVDRVHAMASEIHGELQTQSRMINDMESELDETTEKMNFVMGKLSKLLKTKDTCQLWTIVALTVVLVVMVMLVIW 256          
BLAST of mRNA_Ecto-sp13_S_contig98.21455.1 vs. uniprot
Match: A0A836CAK7_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK7_9STRA)

HSP 1 Score: 175 bits (444), Expect = 7.890e-51
Identity = 100/228 (43.86%), Postives = 148/228 (64.91%), Query Frame = 1
Query:   19 ASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFVHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHVLDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDEDMDEATESMNFVMGRLGKLLKTKSKCQIWTI 702
            +S DP++  RD+V+AKI  ++ +  +    ++   T  +RD ++L+  + ++++ A  QLRDL+RTV+YVE +R SF HID+AEL +RK FL+  K++L       +G +   K+ ++  ++   YR KGDLGA++  E DNTE + D +S     +ARQD+DLEELG HV+RVG  A  INEELR Q R+L  L+ED+    ESM  VMG + K+LKTK + QIW I
Sbjct:    6 SSGDPYFVARDQVAAKIAAVQAKHAQLNAAIDKARTLTDRDVKELKPVVARDLETAKGQLRDLKRTVDYVEKDRASFPHIDDAELRDRKAFLNAQKKILNAIVADTEGDKLAAKLEKETAAKRDSYR-KGDLGAKSNAEADNTEFIHDQRSNRMAHIARQDQDLEELGEHVDRVGMHAETINEELRDQGRMLDDLNEDIVTTHESMGMVMGAMAKILKTKDRAQIWLI 232          
BLAST of mRNA_Ecto-sp13_S_contig98.21455.1 vs. uniprot
Match: A0A4D9DA67_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA67_9STRA)

HSP 1 Score: 165 bits (418), Expect = 5.650e-47
Identity = 101/245 (41.22%), Postives = 153/245 (62.45%), Query Frame = 1
Query:   22 SHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFVHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHVLDHQ-SRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDEDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIYV 753
            + DPF+A R+E+ ++++YI+ + E F  LL  TNTA +   +DLR  L ++++ A+ Q R+L + V  VE NR  F HIDN E+ +R+ F++  KQ L++  + L+    K KM+ D R     +   G  G RT          ++ Q SR  + L  QDE LEELGT V+RVG  A  +N+EL +QNR+L  L+ +++   E M+FVMG+L KLLKTK K Q+W I++L+ +LI+L+L+ IYV
Sbjct:    2 AQDPFFAAREELRSRVDYIQTQHENFLRLLQTTNTAPDLSCRDLRDSLCRDIEAAENQCRELEKVVAVVEKNRQRFRHIDNHEIGQRRAFVTKMKQSLVKIWNNLESDYVKNKMSGDRRDPSRSFDG-GAEGHRTGRSGKRANDFIEEQRSRQHLMLCEQDEGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMSFVMGKLSKLLKTKDKYQLWLIIVLTVVLIVLILLTIYV 245          
BLAST of mRNA_Ecto-sp13_S_contig98.21455.1 vs. uniprot
Match: A0A7S3ZTE6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTE6_9STRA)

HSP 1 Score: 155 bits (392), Expect = 5.100e-42
Identity = 98/249 (39.36%), Postives = 153/249 (61.45%), Query Frame = 1
Query:    7 LNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQ-NRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFVHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHVLDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDEDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIY 750
            L + A  DPF+ V+DE+  K+  I+ R+  F  LL  + T   N  F++ +K + +EV+ A+AQLRDL  TVEYVE +R +F HI++AEL++RK F+  +K+ +  A DA+ G + + K+  D+++ +A  R  G   A  ++E  NT  +    +RV   +  QDE LE+L                EL +Q R+L  +++++DE TE MNFVMG+L KLLKTK  CQ+WTI+ L+ +LI++V ++IY
Sbjct:   93 LMASAGGDPFHVVKDELVVKLRSIEGRVATFTTLLYGSGTTHGNPRFREAKKAVAREVRAAEAQLRDLALTVEYVERDRGAFPHINDAELNQRKAFVDKAKRDVASARDAVAGPRARAKIEADEQAALASQR--GAYDASGDLEMQNTAFIHSSHARVAATIQEQDEGLEQLDGAXXXXXXXXXXXXXELSAQARMLDDMEDELDETTEKMNFVMGKLSKLLKTKDTCQLWTIVALTVVLIVMVFLVIY 339          
BLAST of mRNA_Ecto-sp13_S_contig98.21455.1 vs. uniprot
Match: A0A1E7FKP6_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKP6_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.780e-40
Identity = 90/235 (38.30%), Postives = 148/235 (62.98%), Query Frame = 1
Query:   28 DPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTA-QNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFVHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHVLDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDEDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILII 729
            DP++  R ++  K+E     L  F  +++ T+TA  + +++D +K L + +K A++ LRD+++TV+ VEN+RD F HID+++  ER++ +  S+  +  A D ++    K+K+  D+R+        G LGA+ + ER NT+ +LD+Q++  M +  QDE L+ELG  V RVGE A  I EE+  QN++L  LDEDM  A E +  VMG+L K + TK++ Q+ TI++L+ I II
Sbjct:   61 DPYFVFRSDLQNKLESADEFLADFLRIVHETDTAVSSLEYRDSKKQLKRHLKSAESTLRDVQKTVQAVENDRDKFPHIDDSQFFERRSLVETSRSRIQHAKDEMNSDIIKKKVLSDERNRAVARSGDGLLGAKNDEERQNTDFILDNQAQSSMLMQEQDETLDELGNAVLRVGEMAGTIGEEIGQQNKMLNDLDEDMTTAEEELGMVMGKLAKFMGTKNRGQLKTIVILTLIAII 295          
BLAST of mRNA_Ecto-sp13_S_contig98.21455.1 vs. uniprot
Match: A0A7S4J3Q8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3Q8_9STRA)

HSP 1 Score: 148 bits (373), Expect = 3.840e-39
Identity = 90/250 (36.00%), Postives = 159/250 (63.60%), Query Frame = 1
Query:    4 SLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNR-DFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFVHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHVLDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDEDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIY 750
            SL +    DPF+  R++++ K++ +   L R+  ++++T+TA N  + +D +K L +++K A++ L+DL+ TV  VE+NR  F HI++AEL +R+ F++ S+  + +A   ++    K K+  D+R + A  R  G+ GA+++ +R++   V D  ++ ++ L +QDE LE+L   V RVG+ A  I+EEL  QN++L  +++      E +  VMG+L K+LKTK+KCQI TIL L+ ++ IL  ++IY
Sbjct:   99 SLVTAVEDDPFHVFREDLTRKLDLVDEALARYLRVVDSTDTAVNTAEVKDAKKHLKRQIKNAESALKDLQTTVTMVESNRKKFFHINDAELHDRRKFVTRSRDCISKAKKDMNSDDVKAKILTDERRKAA--RRAGEAGAQSDRDRESASFVADQHAQAQIMLQQQDETLEDLDDAVVRVGQMAGEIHEELGQQNKMLQEMEDXXXXXXEKLGMVMGKLAKMLKTKNKCQIGTILCLTLVVFILFFLVIY 346          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig98.21455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKW1_ECTSI1.000e-16098.80Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A7S3K6G0_9STRA3.370e-6047.84Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2S2M2_9STRA9.370e-6046.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2FMQ2_9STRA3.900e-5645.02Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0XYP6_AURAN1.960e-5341.77t-SNARE coiled-coil homology domain-containing pro... [more]
A0A836CAK7_9STRA7.890e-5143.86Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A4D9DA67_9STRA5.650e-4741.22t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S3ZTE6_9STRA5.100e-4239.36Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A1E7FKP6_9STRA1.780e-4038.30t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S4J3Q8_9STRA3.840e-3936.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig98contigEcto-sp13_S_contig98:26778..32172 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score459.5
Seed ortholog evalue9.9e-127
Seed eggNOG ortholog2880.D7FKW1
Preferred nameSTX6
Model size756
KEGG koko:K02925,ko:K03691,ko:K08498,ko:K08499,ko:K08500
KEGG ReactionR09295
KEGG Pathwayko00514,ko03010,ko04130,map00514,map03010,map04130
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000138,GO:0000139,GO:0000149,GO:0001505,GO:0003674,GO:0003824,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005783,GO:0005794,GO:0005795,GO:0005802,GO:0005829,GO:0005886,GO:0006464,GO:0006486,GO:0006493,GO:0006807,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006897,GO:0006904,GO:0006906,GO:0006996,GO:0007030,GO:0007032,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008417,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010008,GO:0010256,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016081,GO:0016192,GO:0016197,GO:0016482,GO:0016740,GO:0016757,GO:0016758,GO:0017156,GO:0019538,GO:0019905,GO:0022406,GO:0023052,GO:0023061,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030285,GO:0030424,GO:0030658,GO:0030659,GO:0030672,GO:0031090,GO:0031201,GO:0031224,GO:0031300,GO:0031301,GO:0031410,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0031985,GO:0032456,GO:0032588,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033267,GO:0034613,GO:0034645,GO:0036065,GO:0036066,GO:0036211,GO:0042147,GO:0042886,GO:0042995,GO:0043005,GO:0043170,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0043679,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045335,GO:0046903,GO:0046907,GO:0046922,GO:0048278,GO:0048284,GO:0048471,GO:0048489,GO:0050789,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0055037,GO:0060341,GO:0061024,GO:0061025,GO:0065007,GO:0065008,GO:0070013,GO:0070085,GO:0070382,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0090161,GO:0090174,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098563,GO:0098588,GO:0098657,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098916,GO:0099003,GO:0099501,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:0140096,GO:0150034,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903827
Exons8
EggNOG free text desc.SNAP receptor activity
EggNOG OGsKOG3202@1,KOG3202@2759
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-17_001570.1
EC2.4.1.221
Cds size756
COG Functional cat.U
CAZyGT65,GT68
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01003,ko03011,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig98.21455.1prot_Ecto-sp13_S_contig98.21455.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig98 26778..32172 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464244.144155-CDS-Ecto-sp13_S_contig98:26777..268271681464244.144155-CDS-Ecto-sp13_S_contig98:26777..26827Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 26778..26827 +
1681464244.1597292-CDS-Ecto-sp13_S_contig98:28849..289591681464244.1597292-CDS-Ecto-sp13_S_contig98:28849..28959Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 28850..28959 +
1681464244.1717138-CDS-Ecto-sp13_S_contig98:29464..295681681464244.1717138-CDS-Ecto-sp13_S_contig98:29464..29568Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 29465..29568 +
1681464244.180639-CDS-Ecto-sp13_S_contig98:29968..300851681464244.180639-CDS-Ecto-sp13_S_contig98:29968..30085Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 29969..30085 +
1681464244.1891072-CDS-Ecto-sp13_S_contig98:30218..303171681464244.1891072-CDS-Ecto-sp13_S_contig98:30218..30317Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 30219..30317 +
1681464244.197925-CDS-Ecto-sp13_S_contig98:30995..311021681464244.197925-CDS-Ecto-sp13_S_contig98:30995..31102Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 30996..31102 +
1681464244.2073054-CDS-Ecto-sp13_S_contig98:31788..318801681464244.2073054-CDS-Ecto-sp13_S_contig98:31788..31880Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 31789..31880 +
1681464244.2172172-CDS-Ecto-sp13_S_contig98:32095..321721681464244.2172172-CDS-Ecto-sp13_S_contig98:32095..32172Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig98 32096..32172 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig98.21455.1

>prot_Ecto-sp13_S_contig98.21455.1 ID=prot_Ecto-sp13_S_contig98.21455.1|Name=mRNA_Ecto-sp13_S_contig98.21455.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=252bp
MSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQD
LRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFVHIDNAELSERKTFLSD
SKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTE
HVLDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTA
LDEDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIY
V*
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mRNA from alignment at Ecto-sp13_S_contig98:26778..32172+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig98.21455.1 ID=mRNA_Ecto-sp13_S_contig98.21455.1|Name=mRNA_Ecto-sp13_S_contig98.21455.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5395bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98:26778..32172+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGCTGAATAGCGTGGCATCGCACGATCCGTTCTACGCAGTGCGAGA GTGAGTCCAACCAAAGAAAGTTACGCCGCGTTTCGTTTTGAGTAATTCGG CGGCGAGGGCAACGCTTAGAACTTCGAACGCTTTCATGGCAATGGAATAT GTGCATGTGCATGTTACCTACGCTCACCTTGGAACGTTGTAGAGGAAGTG AAGAAAGGGCTTCCCTAGAAACAATCCTTCTATTTGATGATGTGCCTGTC GTTAGTTCGACTGCTGTTGTGCTTGGGGCAAACGGGTACCCTTATCTGCG ACAACAAGAGAACGAGTAGCTCCGTGCTGCCGGAATTTGCTCGGAACACT GCTGTCGTCGTTGTCAGAACACTGACCACGCCGACCTCCACAGTCGTGCG TGAAGTGCTCTCACATCAGCACAACATGCTCATAAAGCAGCACAATATGA AAGCTGGCCGTTTGGCGTCGAGTGCAGGTTGCACAAACGCAGAGTCCGCA CACGTCCGTTAACAACTGAACACACATCCACAGTAAACAGAACAGTAGTT TTCTTCCTTCTCCTAAGATTTGTACATGGCAACCTCGTGATCAATGTAGT GCGTTAAATGTATCGTATTCGGCGGCGCACAAGTATCGAATCCTGATTAA CATGACGCAGGGTAGCACCACCGTACATTTCTTCGTGCCATCGTTCCACA GGAGTACCACACCTGATTTCGGTATGTTCAACCACACCGACCAGCCATGT GCTCGTTCCCAGAACACAAAAGAACAACAGTCTCGGACATCAACGGGCCT TCAACATCATGAAGCAGATGGTATTTCGGCACACCGGGCTGAAACAAGTT GGTACTGCATGTAGTGGGTAGTAGGATCCCAGAATGCAACTTTTGTTTAT GTTGTTCTCAAGCATGGCGCCATCGTCGGACAACGGAGAACCGCTCTTTG TCCTCAGCCTGCAACTCGCAACCTTGAAAGTGTTGTGATGGTATTCATGC AGAGGTGGAAGGCTTGGTATCGGCGTACAACGCTACTCATTTAGTTACGG GGCAGGGGAGAGGAAAGGAAAATTTGGAAATTTCCAATTGACCTTGATTT TGGCTGGTTCGAGGGCGACCGAAGGAGGTCTTAGCGATCACACACGAAAT GCAACGACAAGTTGGGAAGTGTTCCAGAAGTGGAACACCCCCGTTGTCGC CCGGACCAGCTGTTGGGAGTTGTCGTTACCAGCATATCACGCAGTCTACC TCTCCACACCCTCTCTAAGTTCAAGACAAAATCCACCAGGATAAGTTCAA GACAAGGCAGGCGACACAACGGGTGCTTCAAACGCGCTCTTCTGTGATTT GAAGTGTAGAGGTTCTCTGGGAAATCAGTGGAGGGCGGACATCCTGCCGA TGGCCGCCCAGATCTATTAGTTGCTGGGGCCGTGCTGTCGTAGGCTGCAG CTGCGGCCCGAAGTGTCCGCAACTCTTGGTTCACACTACTCATAATCCAC GCTTTACGCACCATCAAAGACCCAGTCCTTCAAACTGCTGCTCGTCCAAG GCGACTAGTTGGGCGAGCTTCTACTGCTGTATCAGCTGCCGCACGCTCTC GAACCTCACCACAAGACACAAGCGCAAAACCGTATGTCAACTGATGGAAA ACCAGTGTTTCCGCGATGAGGTGGAACTCAATCCTTGCTTGAGAAGAACC AAGATATGCAGGACGTTTTTTTTCAGAATACATGCGCAACGGTGACATCT TCGCCGTCCGGGGCATGCACACACCGTGCAACGTTTTTTCGTTGTGCGCC GCATACTCGACATTCTTGTTGGTTGGTTGGTATTTGTGGTTACACATGCA ATCGAGAAATATTAAAAGCTGAGTATACGATTTGATCCGTGACTTACGGG TGCACAATGTCCACCGCAACCGTCCGTGTGACGCTGTGATACGTATGGAT GCCAGGGGGCACTACGCTCCGTGTGTTGCGTTCGCCCCCCCGCCGATCAA TCTGCACAGCAACGCCCTTTTCTCTTCATAACGCAATCTCGTGCCTACAT TTCATGCTCCTTGGAACATCAGTGAGGTTTCTGCAAAGATTGAGTACATC AAGGTTCGACTAGAGCGCTTTCAAGATCTGCTGAACAACACCAACACTGC CCAAAATCGCGACTTTCAGGATCTCAGAAAAGGTAGGTGTGCGGAGTGGA AGGATACGTGCGTGCGGGGACAAAAACCAGTACGTGTGTTTCAGGGGTGT CTCGTGCTCTACTTGATTATTGGTCATATCGTGCAAAACAGCGATGTGAT ACGCCAACCTTGATGCGTTGTTTCTATGCATTCGTCTAGCTATTGACGCT GCGGAGACATCGCGGCTATGTAGCCGCCGTGGCGGCTGATTACGATAGTC GTTGGTTAAATAGCGATGTGATACGCCAACCTTGATGCGCTGTTTCTATG CTTTCGTCTAGCCAATGACGCTGCGGAGACATCGCGGCTGTCTAGCCGCC GTGGCGGCTGATTACGATAGTCGTTAATTAGACAGCAGCCCAACGACATG ATACAACTTATTCCGGTCGATGTCGTGCTGGTCTGGCAATGTTGGGGCAA CAACTTTCGTTGTCCGGTCGACTAGCATTGTCTCGTCGATATGTCTAATG CTTTTGGTTCTTCGTGTTGCTTCCATGAATAAATTAGGGCTTACCAAAGA GGTAAAGGGGGCAGACGCCCAACTGAGAGATTTACGGAGGACTGTGGAGT ACGTGGAGAACAATCGGGATTCCTTCGTTCACATCGATAATGTGAGCTGG TCTGAGAACTAAGTTCGGTCCTTTCGTGGGGTGCCACGACATCCCATGAA CACCCCTGGGTATGCATAGGAGTTTGATTGTAAGGCGTTGGCGAAATCTG TGAACGGACGAAGGCCCATTGCTGTGTGTGTCATATACTTGATTCTGGTG TTATGTTTCACTTGTAAAGGTTTTGCGATCCGCCGCTTGCTGTGTGGGTG TATGGGTGATGTCATGTAGCTCCGTCACCGCATCGTGCTGCAAAGCCGAC TTTTGATCATATTTGCCTGGTGGGCACTCTTTGCATATGGACGTTGTTGG TGAAACCCGTTCGCGTTCTGGATGATCGATGTTACCTGCGGTGGATGAAT TCGTTGCTGATATGCGGCTTGTTTGTTGTTGCTTGTGGCAGGCTGAGCTG TCTGAGCGAAAAACGTTCCTCTCCGACTCGAAACAAGTTTTACTCCGCGC CAGTGATGCGCTCGACGGGCAGCAAACTAAAGAGAAGATGGCACAAGACG ACCGTTCGGTAAGTCACACCATGAACCGGACGATGTCGTCAATGTACGAA TCGTGTTTACTACACTAGCAACGAAACCTTACAGTCAACTCTTCAAAGTG AGAAGTTTTCGTGTTCTTGTATTCTCCTCTGCTGGCCTTAGGAAATGGCG AAATACCGGAGCAAAGGAGATTTGGGGGCGCGAACAGAGGTTGAACGAGA CAACACTGAGCACGTTCTGGATCATCAGTCACGCGTTCGAGTAAGTGATT GTGCGTTGAAGCAGGTGGTTGTAGCATAAAGCAACCATGCGGAAGCATAC GATCCGCGACCTTAACGTGGGCTTTAATAGTTAGTCGCGAAGGTCCTAAT GGCGCGATGGCGTGAGCCTCCCCCCATGGATGTTCTTTCGGGGAAGACGT GCTTCCGTTGTGGCGAAGTTCCGAGCGATTCCGTTTTAATCATTTGTACC CAGATCTAACGCGTATCGTAGATTTTCTCGATTCGAGAGTAGCGGAAGGC GCACTTAAGAACACTTTCGCTTGTGATGACATAGTAGTTGTCCGTCTCAA AGCGAGGCTGCGTCGAAGTACGTGCGGATTAAGAACATGGGACATTTTAG ACCTCCTGCTAATTTGGCAACCACCGATCTTGTGAGGTGTATCAGTGGGA CAAAGGTCCTTGTCAGCGGCGCAATAATAAAAACGAACAGCTGTCCCGAA GGAGTGCAACATTCGGGTTTGTTTTAGACGTTCGATTTTCAATTGTGCTA CGGGAGACTCGCAGGCAACAACTTGCTCGGCACTGGCTGAGTGAATCGCA GTTCCCGCACTTGGTGGTGACGAATCTACAACATCTCCTACATTGCAAAC TACCGAGTTGCCCGTGCAGTATAGCAGCACAGATCTAACCGCAACCGAAT GGGGTTTTGCGAGCTCAGATGCAACTTGCGCGACAAGATGAAGATCTCGA AGAGCTGGGCACTCACGTAGAGCGGGTCGGCGAGACAGCGACTGTCATCA ACGAGGAGCTCAGGAGTCAAAATAGGTGAAGTTCAGGTATCGCCTCGAAG AATCAAGTGTCCGCCATTGTTTGCTGTGCACAGACTTTTCACGTAACTCT GTAGTGCTAAAACAGTAGCACCCAGGCGGTGAAATATCCAAGTCCGGAGG GTTGCGGGGTCAGGAGCTACACTGTGATTGGTCAAAGGGGGGAAAGATGA TGAGGCTTTTGGCGTTGGGGTGGAACTCAGCTATAGCGTGACGAAAATAT CGATGGCAAATCAAATTGATTTTTGGAAATCGCGAAGACCAACTTGGGAC TGCATAACCCCATGGTGACGTCGTATTGGCGATGACTGCGCCGACCGCGA GAAGCACATCGGCCTTGCGGAACCCAAATGCATGGCCCGCTGCGGGCAAA AGCTGTTATGCGTTGATTCTGTAGGCGTGTCGATTATTCGTTCTATTGAA ATGTAGGCGGGTCGTTATGGAAGTTCCTTCCACACTATGTAGACCAAGAG GGCAAAGTCCGGTCAATGCCAAGAGGCGGCCAAAAATAGTTTGTGAAGAG GAAGACCTCGAATGAGGCCTGGACCACTGGCACCACCTGCTCGTGCTTAG CTCCGTGTTGATGCCGAATGAAATGTACAGCGTCCGCATCGTGCACATGG TTTATCGCTCTACCTTTTTGATGACACATCTCGTGTGTCTCTGCGTGTCC GCCTTGTACAGGCTGCTGACAGCGTTGGACGAGGACATGGATGAAGCCAC GGAAAGCATGAACTTCGTTATGGGACGGCTGGGGAAGCTCCTCAAAACTA AGAGTGAGTCGTTCGACAGCGGTAACTCATGGTGACCATTTCAGTTTGTT TCTGCTCCCGTTGGGCCCCCCCGTGTACACCTCTCCCAAACTGTTGCAAA TCAGGTCGCATTTTGGAAAGAACGCACCAAAAAGCATACTGCGAAGTTGA CCTGTACCTGTACCAGACTCGCTGTCCCTTACCCACTGCCGTCTTTCTTT TGCACGTCCTCACCACAGGCAAGTGCCAAATCTGGACGATCTTGCTGCTT TCCTTCATCCTCATTATTTTAGTGCTGATGCTCATATATGTTTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig98:26778..32172+

>mRNA_Ecto-sp13_S_contig98.21455.1 ID=mRNA_Ecto-sp13_S_contig98.21455.1|Name=mRNA_Ecto-sp13_S_contig98.21455.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=756bp|location=Sequence derived from alignment at Ecto-sp13_S_contig98:26778..32172+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGCTGAATAGCGTGGCATCGCACGATCCGTTCTACGCAGTGCGAGA
TGAGGTTTCTGCAAAGATTGAGTACATCAAGGTTCGACTAGAGCGCTTTC
AAGATCTGCTGAACAACACCAACACTGCCCAAAATCGCGACTTTCAGGAT
CTCAGAAAAGGGCTTACCAAAGAGGTAAAGGGGGCAGACGCCCAACTGAG
AGATTTACGGAGGACTGTGGAGTACGTGGAGAACAATCGGGATTCCTTCG
TTCACATCGATAATGCTGAGCTGTCTGAGCGAAAAACGTTCCTCTCCGAC
TCGAAACAAGTTTTACTCCGCGCCAGTGATGCGCTCGACGGGCAGCAAAC
TAAAGAGAAGATGGCACAAGACGACCGTTCGGAAATGGCGAAATACCGGA
GCAAAGGAGATTTGGGGGCGCGAACAGAGGTTGAACGAGACAACACTGAG
CACGTTCTGGATCATCAGTCACGCGTTCGAATGCAACTTGCGCGACAAGA
TGAAGATCTCGAAGAGCTGGGCACTCACGTAGAGCGGGTCGGCGAGACAG
CGACTGTCATCAACGAGGAGCTCAGGAGTCAAAATAGGCTGCTGACAGCG
TTGGACGAGGACATGGATGAAGCCACGGAAAGCATGAACTTCGTTATGGG
ACGGCTGGGGAAGCTCCTCAAAACTAAGAGCAAGTGCCAAATCTGGACGA
TCTTGCTGCTTTCCTTCATCCTCATTATTTTAGTGCTGATGCTCATATAT
GTTTAG
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