prot_Ecto-sp13_S_contig9799.21448.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9799.21448.1
Unique Nameprot_Ecto-sp13_S_contig9799.21448.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length727
Homology
BLAST of mRNA_Ecto-sp13_S_contig9799.21448.1 vs. uniprot
Match: D7FJ23_ECTSI (HEAT repeat-containing protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ23_ECTSI)

HSP 1 Score: 1048 bits (2709), Expect = 0.000e+0
Identity = 602/724 (83.15%), Postives = 627/724 (86.60%), Query Frame = 0
Query:    7 RECCLPLLRYCLDWEQARNHPYNERLLKILLGVTLNLSVDDATVAAVAAA--ERKESSRDTKSPKKTTRGSKGKDKANAAEDSPASVSSTIFPSVEAQQLMHRALRTPGPTQSHALKCLCATTSPSSCVVGAQPAGEDESTRQKRDLVAVLVEAGLAGADGSLVASAARALPCLPGDVAALLVGLPPLLGAGAGAPTPSKGRKKKSSATFMADAATTETGWVFTLGGLVELAQALCCASTSSFSALDQQQQSESRSQSHPTKGVRDGRAGATAGATTSAEGWGWAGPLAIARPLFDVLPPLLAVVTKGAXXXXXXXXXXVSGGDIVDAAEYGLWLTMDVLGGVLRRWGKGGVGXXXXXXAAEKLFDGRRAGEDAEIVLACVRENPSPQTRNSALALLSRMATLFPAQMASRLRSLLDAVCAAAAGGEGLANGEGGGG-ARAALRQTQKAVQSIVPALKAHGSEAGVGAHIVVQVFVEALDDGPAHARRALFSTLVDSLGEESLAIMSALLLRRAVSAGGPNVSGRSADEETTSALIEFVHQTIHRSRARGQVRTLVGLVQACHRLSVSAAERSGSLSGQALDEAVECFVEHSAANEKGEDQSKADYLKLPLVQQEPARDKKASSPAFMTMDLRALCEEDSKHGAEKERMTENFLESVLSFVRDHLVSRPLVMAVAAAAERGADGKGLSEDEGIQEGFLLLCEELLLFLRTLSVCGRASSSGSGD 727
            RECCLPLLR CLD EQA+N+  NERLL ILLGVTLNL+V DATVAAVA A  ER+ESSR+TKSPKKTTRGSK  DKA+AAED PAS SSTIF SVEA+QLMHRALR+PGP QSHAL CLCAT+ PS C VGAQP GEDESTRQ+RDLVAVLVEAGLAGADGSLVA+AARALPCLPGD+AALLVGLPPL GAGAGA TPSKGRKKKSSA F AD ATTETGWV TLGGLVELAQALC  S+SS                H TKGVR+GR   TAGATTSAEGWGWAGPLAIARPLFDVLP L+AVVTKGA          V GGD+VDAAEYGLWLTMDVLGGVLRRWGKGGVGXXXXX AAEKL++G RAGEDAE VLACVRENPSPQTRNSALALLSRMATLFPAQMASRLRSLLDAVCAA                ARAALRQTQKAVQS+VPALKAHGSEAGVGAH VVQVFVEALDD PAHARRALFSTLVDSLGEESLAIMSALLLRRAVS+G P+V G+SADEETTSALIEFVHQTIHRSRARGQVRTLVGLVQACHRLSVSAAERSGSLSGQALDEAVECFVE SAA+EKGEDQ K DYL+LPLVQQEPARDKKASSPAFMTMDLRAL EEDSK+      M  NFLE VLSFVRDHLVSRPLVMAVAAAAERGADGKGLSEDEGIQEGFLLLCEELLLFLRTLSVCGR SSSGSGD
Sbjct: 1332 RECCLPLLRCCLDSEQAQNNQNNERLLNILLGVTLNLAVGDATVAAVAVAVAEREESSRNTKSPKKTTRGSK--DKASAAEDYPASASSTIFASVEAEQLMHRALRSPGPAQSHALHCLCATSLPS-CGVGAQPRGEDESTRQRRDLVAVLVEAGLAGADGSLVAAAARALPCLPGDMAALLVGLPPLSGAGAGASTPSKGRKKKSSAAFKADTATTETGWVLTLGGLVELAQALCGPSSSSXXXXXXXXXXXXXX--HSTKGVRNGRGAVTAGATTSAEGWGWAGPLAIARPLFDVLPSLIAVVTKGAAEEEGSSSTAVGGGDVVDAAEYGLWLTMDVLGGVLRRWGKGGVGXXXXXAAAEKLYEGCRAGEDAETVLACVRENPSPQTRNSALALLSRMATLFPAQMASRLRSLLDAVCAAXXXXXXXXXXXXXXXXARAALRQTQKAVQSVVPALKAHGSEAGVGAHFVVQVFVEALDDAPAHARRALFSTLVDSLGEESLAIMSALLLRRAVSSGRPDVGGKSADEETTSALIEFVHQTIHRSRARGQVRTLVGLVQACHRLSVSAAERSGSLSGQALDEAVECFVEDSAASEKGEDQLKTDYLQLPLVQQEPARDKKASSPAFMTMDLRALSEEDSKY------MAGNFLELVLSFVRDHLVSRPLVMAVAAAAERGADGKGLSEDEGIQEGFLLLCEELLLFLRTLSVCGRVSSSGSGD 2044          
BLAST of mRNA_Ecto-sp13_S_contig9799.21448.1 vs. uniprot
Match: A0A6H5KF89_9PHAE (HEAT repeat-containing protein 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF89_9PHAE)

HSP 1 Score: 1036 bits (2678), Expect = 0.000e+0
Identity = 593/724 (81.91%), Postives = 618/724 (85.36%), Query Frame = 0
Query:    7 RECCLPLLRYCLDWEQARNHPYNERLLKILLGVTLNLSVDDATVAAVAAAERKESSRDTKSPKKTTRGSKGK--DKANAAEDSPASVSSTIFPSVEAQQLMHRALRTPGPTQSHALKCLCATTSPSSCVVGAQPAGEDESTRQKRDLVAVLVEAGLAGADGSLVASAARALPCLPGDVAALLVGLPPLLGAGAGAPTPSKGRKKKSSATFMADAATTETGWVFTLGGLVELAQALCCASTSSFSALDQQQQSESRSQSHPTKGVRDGRAGATAGATTSAEGWGWAGPLAIARPLFDVLPPLLAVVTKGAXXXXXXXXXXVSGGDIVDAAEYGLWLTMDVLGGVLRRWGKGGVGXXXXXXAAEKLFDGRRAGEDAEIVLACVRENPSPQTRNSALALLSRMATLFPAQMASRLRSLLDAVCAAAAGGEGLANGEGGGGARAALRQTQKAVQSIVPALKAHGSEAGVGAHIVVQVFVEALDDGPAHARRALFSTLVDSLGEESLAIMSALLLRRAVSAGGPNVSGRSADEETTSALIEFVHQTIHRSRARGQVRTLVGLVQACHRLSVSAAERSGSLSGQALDEAVECFVEHSAANEKGEDQSKADYLKLPLVQQEPARDKKASSPAFMTMDLRALCEEDSKHGAEKER-MTENFLESVLSFVRDHLVSRPLVMAVAAAAERGADGKGLSEDEGIQEGFLLLCEELLLFLRTLSVCGRASSSGSGD 727
            RECCLPLLR  LD EQARNHP NE LLKILL VTLN SV DA V AVAA++R+ SSR+TKSP KT RGSKGK  DKA+AAEDSPAS SSTIFPSV+A+QLMHRALRTPGP QSHAL CLCAT S SS   GAQP G DESTRQ+RDLV VLVEAGLAGADGSLVA+AARALPCLPGD+AALL GL PL GAGAGA TPSK  KKK SAT  ADAATTETGWVFTLGGLVELAQALC AS+                 SHPTKG       ATAG TTSAEGWGWAGPLAIARPLFDVL  LLAVVTKGA          VS GD+VDAAEYGLWLTMDVLG VLRRWGKGGVG XXXX AAEKL+DG RAGEDAE VL CV ENPSPQTRNSALALLSRMATLFPAQM SRLRSLLDAVCA AAGG+GL++GEGGGGARAALRQTQKAVQS+VPALKAHG EAGVGAH VVQVFVEALDD PAHARRALFSTLVDSLGEESL IMSALLLRRAVS  GP+  G+SAD ETTSALIEFVHQTIHR RA GQV+TLVGLVQACHRLSV AAERSGS+SGQALDEAVECFVE SAA+EKG DQ K DYL+LPL QQEPARDKKASSPAFMTMDLRALCEEDSKH AEKE  MT  FLE VLSFVR+HLVSRPLVMAVAAAAERGADGKGLSEDEGIQEGFLLLCEELLLFLRTLSVCGRASS+GSGD
Sbjct: 1292 RECCLPLLRCLLDSEQARNHPNNEHLLKILLTVTLNPSVGDAAVVAVAASDREGSSRNTKSPNKT-RGSKGKSEDKASAAEDSPASASSTIFPSVDAEQLMHRALRTPGPAQSHALHCLCAT-SVSSVGAGAQPVGGDESTRQRRDLVVVLVEAGLAGADGSLVAAAARALPCLPGDIAALLAGLSPLSGAGAGAATPSKQHKKKQSATIKADAATTETGWVFTLGGLVELAQALCGASSXXXXXXXXXXXXXXXXVSHPTKGA------ATAGGTTSAEGWGWAGPLAIARPLFDVLLSLLAVVTKGAAEEEGSSSTAVSRGDVVDAAEYGLWLTMDVLGSVLRRWGKGGVGGXXXXAAAEKLYDGCRAGEDAETVLTCVSENPSPQTRNSALALLSRMATLFPAQMTSRLRSLLDAVCAGAAGGKGLSSGEGGGGARAALRQTQKAVQSVVPALKAHGFEAGVGAHFVVQVFVEALDDAPAHARRALFSTLVDSLGEESLPIMSALLLRRAVSFDGPDADGKSADGETTSALIEFVHQTIHRFRAPGQVKTLVGLVQACHRLSVRAAERSGSISGQALDEAVECFVEDSAADEKGGDQFKTDYLQLPLAQQEPARDKKASSPAFMTMDLRALCEEDSKHDAEKEEGMTGIFLELVLSFVREHLVSRPLVMAVAAAAERGADGKGLSEDEGIQEGFLLLCEELLLFLRTLSVCGRASSTGSGD 2007          
BLAST of mRNA_Ecto-sp13_S_contig9799.21448.1 vs. uniprot
Match: A0A835ZGF5_9STRA (HEAT repeat-containing protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGF5_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.080e-8
Identity = 90/363 (24.79%), Postives = 148/363 (40.77%), Query Frame = 0
Query:  380 IVLACVRENPSPQTRNSALALLSRMATLFPAQMASRLRSLLDAVCAAAAGGEGLANGEGGGGARAALRQTQKAVQSIVPAL-KAHGSEAGVGA--HIVVQVFVEALDDGPAH--ARRALFSTLVDSLGEESLAIMSALLLRRAVSAGGPNVSGRSADEETTSALIEFVHQTIHRSRARGQVRTLVGLVQACHRLSVSAAERSGSLSGQALD------EAVECFVEHSAANEKGEDQSKADYLKLPLVQQEPARDKKASSPAFMTMDLRALCEED-----SKHGAEKERMTENFLESVLSFVRDHLVSRPLVMAVAAAAERGADGKGLSEDEGIQEGFLLLCEELLLFLRTLSVCGRASSSGSG 726
            +V   ++   S QT N+ L LL++MA   P      + + LDA+ +       L++G        A    ++ ++ ++PAL + H  ++   A    V   F      G      R  LF +L+ +LG E L  +   LL  A     P   G   DE   S +++F+H+    S A  QVR +  +V   H L + A     +    AL+      +A+ CF  H  A                     P  D +         D       D     S+ GA+ +++    + ++L+FV+  L +  L + + A A    D     + + +Q  FL+LCE LLL LR+L+ C  A +S  G
Sbjct: 1931 LVAQLLQRGLSVQTHNAGLLLLAQMAEACPP---GAVAASLDAIVSV------LSDGAVAAPDSYAFTLARQVIERVLPALTRRHDPDSSSVASPQAVASTFAAPQLFGRVRPECRAPLFGSLLKALGWEVLPCVVTALL--AWGLANPTEGGEEEDEGAVS-VVDFLHKLCAESGAEEQVRAMTEVVSVAHSLVLEAVTHDETGEATALESLDQARQALACFTSHGHA---------------------PTNDMEVDDDGAGGSDTAGAAGFDAQLVLSQTGADAQQL----VHALLTFVKQRLAAGELHVLIVARAHSDGD----DDQQRLQREFLMLCEALLLSLRSLTACHAAQASREG 2252          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9799.21448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJ23_ECTSI0.000e+083.15HEAT repeat-containing protein 1 n=1 Tax=Ectocarpu... [more]
A0A6H5KF89_9PHAE0.000e+081.91HEAT repeat-containing protein 1 n=1 Tax=Ectocarpu... [more]
A0A835ZGF5_9STRA2.080e-824.79HEAT repeat-containing protein 1 n=1 Tax=Tribonema... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040191U3 small nucleolar RNA-associated protein 10PANTHERPTHR13457BAP28coord: 217..714

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9799contigEcto-sp13_S_contig9799:404..6159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9799.21448.1mRNA_Ecto-sp13_S_contig9799.21448.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9799 389..6159 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9799.21448.1 ID=prot_Ecto-sp13_S_contig9799.21448.1|Name=mRNA_Ecto-sp13_S_contig9799.21448.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=727bp
MCVVLCRECCLPLLRYCLDWEQARNHPYNERLLKILLGVTLNLSVDDATV
AAVAAAERKESSRDTKSPKKTTRGSKGKDKANAAEDSPASVSSTIFPSVE
AQQLMHRALRTPGPTQSHALKCLCATTSPSSCVVGAQPAGEDESTRQKRD
LVAVLVEAGLAGADGSLVASAARALPCLPGDVAALLVGLPPLLGAGAGAP
TPSKGRKKKSSATFMADAATTETGWVFTLGGLVELAQALCCASTSSFSAL
DQQQQSESRSQSHPTKGVRDGRAGATAGATTSAEGWGWAGPLAIARPLFD
VLPPLLAVVTKGAAEEGGSSSTTVSGGDIVDAAEYGLWLTMDVLGGVLRR
WGKGGVGGGGGSAAAEKLFDGRRAGEDAEIVLACVRENPSPQTRNSALAL
LSRMATLFPAQMASRLRSLLDAVCAAAAGGEGLANGEGGGGARAALRQTQ
KAVQSIVPALKAHGSEAGVGAHIVVQVFVEALDDGPAHARRALFSTLVDS
LGEESLAIMSALLLRRAVSAGGPNVSGRSADEETTSALIEFVHQTIHRSR
ARGQVRTLVGLVQACHRLSVSAAERSGSLSGQALDEAVECFVEHSAANEK
GEDQSKADYLKLPLVQQEPARDKKASSPAFMTMDLRALCEEDSKHGAEKE
RMTENFLESVLSFVRDHLVSRPLVMAVAAAAERGADGKGLSEDEGIQEGF
LLLCEELLLFLRTLSVCGRASSSGSGD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040191UTP10