prot_Ecto-sp13_S_contig9766.21417.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9766.21417.1
Unique Nameprot_Ecto-sp13_S_contig9766.21417.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length304
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9766.21417.1 vs. uniprot
Match: D8LQ44_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ44_ECTSI)

HSP 1 Score: 540 bits (1390), Expect = 7.270e-180
Identity = 287/307 (93.49%), Postives = 289/307 (94.14%), Query Frame = 0 
Query:    1 QIDFSRRDPILRGLNDFLPQLMPTLYNFLVQQWMGYKAAVAAAGGASAGVGATEAALMNRALNLLSKIMPWAGEKSMGEEPNDFLPAIAQLSTLRVARSESLVCLEAMCSQKLSEKHFHRLLEHLPEMVQHVKQALAQEALPLSESLEVHQMLSACLEETMMRNINYIAGEKDFQNRNSRKSELLSKFLEEVLQLTKMPSKRMAGNLIQAWQTLANKPNAKDMPAFVVMVPQLVAAFASHIVT---VSWLAGSRVGQLPLSVMPIHRSAVRFEDDVTDDPVAAEEFVDEEDYFQFISGFRTQVSASQ 304
            +IDFSRRDPILRGLNDFLPQLMPTLYNFLVQQWMGYKAAVAAAGGASAGVGATEAALMNRALNLLSKIMPWAGEKSMGEEPNDFLPAIAQLSTLRVARSESLVCLEAMCSQKLSEKHFHRLLEHLPEMVQHVKQALAQEALPLSESLEVHQMLSACLEETMMRNINYIAGEKDFQNRNSRKSELLSKFLEEVLQLTKMPSKRMAGNLIQAWQTLANKPNAKDMPAFVVMVPQLVAAFASHIVT         S VGQ PL VM  HRS VRFEDDVTDDPVAAEEFVDEEDYFQF+SGFRTQV   Q
Sbjct:  198 EIDFSRRDPILRGLNDFLPQLMPTLYNFLVQQWMGYKAAVAAAGGASAGVGATEAALMNRALNLLSKIMPWAGEKSMGEEPNDFLPAIAQLSTLRVARSESLVCLEAMCSQKLSEKHFHRLLEHLPEMVQHVKQALAQEALPLSESLEVHQMLSACLEETMMRNINYIAGEKDFQNRNSRKSELLSKFLEEVLQLTKMPSKRMAGNLIQAWQTLANKPNAKDMPAFVVMVPQLVAAFASHIVTRRQCHECTSSSVGQFPLKVMRTHRSEVRFEDDVTDDPVAAEEFVDEEDYFQFVSGFRTQVKLLQ 504
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9766.21417.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ44_ECTSI7.270e-18093.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..303
e-value: 1.0E-24
score: 88.1
IPR040018Exportin-5PANTHERPTHR11223:SF3EXPORTIN-5coord: 5..301
NoneNo IPR availablePANTHERPTHR11223EXPORTIN 1/5coord: 5..301
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 4..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9766contigEcto-sp13_S_contig9766:643..6143 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9766.21417.1mRNA_Ecto-sp13_S_contig9766.21417.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9766 643..6143 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9766.21417.1 ID=prot_Ecto-sp13_S_contig9766.21417.1|Name=mRNA_Ecto-sp13_S_contig9766.21417.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=304bp
QIDFSRRDPILRGLNDFLPQLMPTLYNFLVQQWMGYKAAVAAAGGASAGV
GATEAALMNRALNLLSKIMPWAGEKSMGEEPNDFLPAIAQLSTLRVARSE
SLVCLEAMCSQKLSEKHFHRLLEHLPEMVQHVKQALAQEALPLSESLEVH
QMLSACLEETMMRNINYIAGEKDFQNRNSRKSELLSKFLEEVLQLTKMPS
KRMAGNLIQAWQTLANKPNAKDMPAFVVMVPQLVAAFASHIVTVSWLAGS
RVGQLPLSVMPIHRSAVRFEDDVTDDPVAAEEFVDEEDYFQFISGFRTQV
SASQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR040018XPO5
IPR016024ARM-type_fold