mRNA_Ecto-sp13_S_contig9764.21415.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9764.21415.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI) HSP 1 Score: 1188 bits (3073), Expect = 0.000e+0 Identity = 699/842 (83.02%), Postives = 724/842 (85.99%), Query Frame = 1
Query: 4 YVFYDTWNFLDTSTIGCLLVTFVFRMIALDDDFFLFHAQFFYAASAPLLFSRLLVLSQIDVTLGPMTQQVIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEYEDPACNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCKLPDGAREAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNADKEFHLARAKLIYQSARVVTHRRPPPPLNLVKAVVGTLIDAATEPVRFRRWLARSPPEDANEPCPPDGPGXXXXXX--HKHDAVIGEAERDRGNIGGGSPGDCPIAGT-GDEFIAWTQTHEWRAFEGGVQRFLFAFTFGAAAIVMSAILWTLSVPWVAWCLLRLAHPVVVKGADNVEDEEDETNQGLGHLEEEEEMKETVHPGYFRRILMTFLWSAVLVVATAVAAILCASYIFLSVVLWFVGLHMIFKWVRTNWTPKRKGRPTAMPGQEEGDHWQRAWDLVSLRNHGVREDFDQAHFNVLPFLKSKTGLDRQHLAWLTKARDDKSKSEEDLIDGDRELPGACIDMDNLLKKAAGGNNGDGGENSXXXXXXXXXXXXXX----TASPAANGGAVGGDDAAXXXXXXXXXXDGVSGATSTAAAGCGVDNEGTTPRADSCGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGASAPASTTSTSFAADAESGGPAVNNTSKAVTSNGDMATGSGDTCGHDSAQHVQPSKGGRGSTFGRDTKMGSVRVTDVAAVVTTDSNXXXXXXXGHRGNARGTGAQLGTADDVAAESAKCDDRLGDDGDWGDSDEELRTLEEMVRRLRETRRKRRGKEGHNIQDR 2508
YVFYDTWNFLDTSTIGCLLVTFVFRMIALDDDFFLFHAQFFYAASAPLLFSRLLVLSQID TLGPMTQ VIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGE+EDP CNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCKLPDGA+EAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDN DKEFHLARAKLIYQSARVVT RRPPPPLNLVK V+GTLIDA TEPVRFRRW+ R+PPED NE P DG XXXXXX H++DAV GEAE D+GNIGGGSPGDCPIAGT GDEFIAWTQTHEWR FEGGVQR LFAFTFGAAAIVMSAILWTLSVPWVAWCLLRLAHPVV K A+N+EDEED+TNQGLG +EEEEEMKE VHPGYFRRI +TFLWSAVLVVATAVAAILCA YI SVVLWFVGLHMI+KWVRTNWTP+ RP AMPGQEEGDHWQRAWDLVSLRNHGVREDFDQAHFNVLPFLKSKTGLDRQHLAWLTKARDDK+KSEEDLIDGDRELPGA IDM++L K+A G NNGDGG++S X SP GGAVG DGVSGATSTAAA NEGTTPRA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GAS+PASTTSTS AADAESGGPAV+ TS A T N D ATGSGDT GHDSA+HVQPSKGG ST DTKMG VRVT AAVVTT S XXXXXXX RGNARGTGAQ TADDVAAESA DDRLGDDGD DSDEELR LE MVRRLR+ RKRRGKEG N QDR
Sbjct: 1178 YVFYDTWNFLDTSTIGCLLVTFVFRMIALDDDFFLFHAQFFYAASAPLLFSRLLVLSQIDATLGPMTQ-VIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEFEDPTCNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCKLPDGAQEAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNGDKEFHLARAKLIYQSARVVTRRRPPPPLNLVKVVLGTLIDATTEPVRFRRWMVRNPPEDENEANPADGAXXXXXXXXGHENDAVEGEAEGDQGNIGGGSPGDCPIAGTPGDEFIAWTQTHEWRTFEGGVQRVLFAFTFGAAAIVMSAILWTLSVPWVAWCLLRLAHPVVEKRAENLEDEEDDTNQGLGDIEEEEEMKEKVHPGYFRRIFITFLWSAVLVVATAVAAILCALYILFSVVLWFVGLHMIYKWVRTNWTPESNDRPRAMPGQEEGDHWQRAWDLVSLRNHGVREDFDQAHFNVLPFLKSKTGLDRQHLAWLTKARDDKAKSEEDLIDGDRELPGARIDMEHLRKEAVGRNNGDGGKDSGDGGETKEAVGSGXXXXXAPSPEVQGGAVG---------------DGVSGATSTAAAXXXXXNEGTTPRAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGASSPASTTSTSIAADAESGGPAVDKTSTAATLNDDKATGSGDTGGHDSAEHVQPSKGGPSSTLDGDTKMGPVRVTGSAAVVTTGSXXXXXXXXXDRGNARGTGAQPTTADDVAAESADDDDRLGDDGDLVDSDEELRRLEVMVRRLRDKWRKRRGKEGRNRQDR 2003
BLAST of mRNA_Ecto-sp13_S_contig9764.21415.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI) HSP 1 Score: 560 bits (1444), Expect = 8.680e-176 Identity = 312/563 (55.42%), Postives = 362/563 (64.30%), Query Frame = 1
Query: 1 RYVFYDTWNFLDTSTIGCLLVTFVFRMIALDDDFFLFHAQFFYAASAPLLFSRLLVLSQIDVTLGPMTQQVIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEYEDPACNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCKLPDGAREAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNADKEFHLARAKLIYQSARVVTHRRPPPPLNLVKAVVGTLIDAATEPVRFRRWLARSPPEDANEPCPPDGPGXXXXXXHKHDAVIGEAERDRGNIGGGSPGDCPIAGTGDEFIAWTQTHEWRAFEGGVQRFLFAFTFGAAAIVMSAILWTLSVPWVAWCLLRLAHPVVVK-----------GADNVEDEEDETNQGLGHLEEEEEMKETVHPGYFRRILMTFLWSAVLVVATAVAAILCASYIFLSVVLWFVGLHMIFKWVRTNWTPKRKGRPTAMPGQEEGDHWQRAWDLVSLRNHGVREDFDQAHFNVLPFLKSKTGLDRQHLAWLTKARDDKSKSEEDLIDGDRELPGACIDMDNLLKKA 1656
RYVFYDTWNFLDTSTIGC+LV F+FRMIALDD FFLFHAQFFYA SAPLLFSRLLVLSQID TLGPMTQ VIWRM+S TLRFSAFI++VMLSFALAFHAVFHTCGEY +P C +DD FPLRDAFGTFG SFVTVF+ ALGGPDFE ++ AGS+CRC LP+GAR AGIFL+VVYM+ M VVLLNLLIAVLST H KVY NA+KEFH ARA+LIYQSARVV+ RPPPPLNL+K V G L+DA TE R W+ R R + + ++ TH+W+ EGG+QR FAFTFG AA+ +S ILW +SVPWVAWCL RL H + E D+ KE H GYFRR L L+VA A+ LC YIF +++LW VG+ K P MPGQE+G HW+RAW+L SLRN G R + QAHF++ P LKSKTGLD QHLA LTK R D+S SE LI+ D++LP ID+ +L K A
Sbjct: 1112 RYVFYDTWNFLDTSTIGCILVAFIFRMIALDDKFFLFHAQFFYALSAPLLFSRLLVLSQIDATLGPMTQ-VIWRMMSHTLRFSAFIAMVMLSFALAFHAVFHTCGEYSEPQCTLDDDDAFPLRDAFGTFGDSFVTVFTYALGGPDFEAFQLAGSDCRCDLPEGARNAGIFLLVVYMITMTVVLLNLLIAVLSTTHGKVYANAEKEFHHARARLIYQSARVVSRSRPPPPLNLIKLVCGILLDAGTEVWRVGVWVTRG--------------------------------RSQARM----------------LKPFSTTHQWKTLEGGLQRLEFAFTFGVAAVGLSTILWIVSVPWVAWCLHRLVHKAEEETXXXXXXXXXXXXXXXXXERDDGXXXXXXXXXXXXXKEKPHLGYFRRFLSGIKSMCSLLVAMVAASFLCLLYIFATMILWAVGIXXXXXXXXXXXDKKNGDMPEPMPGQEDGHHWKRAWELASLRNQGARANRGQAHFHIAPLLKSKTGLDMQHLAQLTKNRHDESNSEAKLIEVDQKLPYFAIDLGHLQKLA 1625
BLAST of mRNA_Ecto-sp13_S_contig9764.21415.1 vs. uniprot
Match: A0A6H5K4M1_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M1_9PHAE) HSP 1 Score: 420 bits (1079), Expect = 4.130e-130 Identity = 261/546 (47.80%), Postives = 313/546 (57.33%), Query Frame = 1
Query: 7 VFYDTWNFLDTSTIGCLLVTFVFRMIALDDDFFLFHAQFFYAASAPLLFSRLLVLSQIDVTLGPMTQQVIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEYEDPACNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCKLPDGAREAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNADKEFHLARAKLIYQSARVVTHRRPPPPLNLVKAVVGTLIDAATEPVRFRRWLARSPPEDANEPCPPDGPGXXXXXXHKHDAVIGEAERDRGNIGGGSPGDCPIAGTGDEFIAWTQTHEWRAFEGGVQRFLFAFTFGAAAIVMSAILWTLSVPWVAWCLLRLAHPVVVKGADNVEDEEDETNQGLGHLEEEEEMKETVHPGYFRRILMTFLWSAVLVVATAVAAILCASYIFLSVVLWFVGLHMIFKWVRTNWTPKRKGRPTAMPGQEEGDHWQRAWDLVSLRNHGVREDFDQAHFNVLPFLKSKTGLDRQHLAWLTKARDDKSKSEEDLIDGDRELPGACIDMDNL 1644
VFYDTW FLDT TIGC+LV F+FR+ LDD FFLFHA+FFYA SAP LFSRLLVLSQID TLGPMTQ VIWRM+S TLRFSAFI++VMLSFALAFHAVFHTCGE+ +P C +DD FP+RDAFGTFG SFVTVF+ +CRC LP+GAR AGIFL+VVYMV M VVLL LLIAVLST H KVYDNA+KEFH ARA IYQSARVV+ RPPPPLNL+K V G L+DA T R W R R + + ++ +H+ + EGG+QR FAFTFG AA+ +SAILW +SVPWV CL L H + + L +T+ G R + + L +A A+ LC Y+F +++LW VG+ MI W G P + R + QAHF V P LKSKTGLD +HLA LTK RDD+S SE LI+ D++LP ID+ +L
Sbjct: 451 VFYDTWKFLDTPTIGCILVAFIFRVTTLDDKFFLFHARFFYALSAPRLFSRLLVLSQIDATLGPMTQ-VIWRMMSHTLRFSAFIAMVMLSFALAFHAVFHTCGEHIEPQCTFDDDDAFPIRDAFGTFGDSFVTVFT----------------DCRCNLPEGARNAGIFLLVVYMVTMTVVLLKLLIAVLSTTHGKVYDNAEKEFHHARACFIYQSARVVSRSRPPPPLNLIKLVCGILLDAGTMLWRAGAWFRRG--------------------------------RSQAKM----------------LKPFSTSHQRKTLEGGLQRLEFAFTFGVAAVGLSAILWIVSVPWVDSCLHCLVH---------------KAGEAASWL------LQTIFSGI--RSMFSLL------IAMVAASFLCVLYVFATMILWAVGIWMIVTW----------GLGACQPAESR-----------------ARANRAQAHFRVAPLLKSKTGLDMKHLAQLTKNRDDESNSEAKLIEVDQKLPYFAIDLGHL 875
BLAST of mRNA_Ecto-sp13_S_contig9764.21415.1 vs. uniprot
Match: A0A6H5JTT3_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT3_9PHAE) HSP 1 Score: 418 bits (1074), Expect = 1.840e-128 Identity = 270/614 (43.97%), Postives = 331/614 (53.91%), Query Frame = 1
Query: 1 RYVFYDTWNFLDTSTIGCLLVTFVFRMIA-LDDDFFLFHAQFFYAASAPLLFSRLLVLSQIDVTLGPMTQQVIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEYEDPACNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCKLPDGAREAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNADKEFHLARAKLIYQSARVVTHRRPPPPLNLVKAVVGTLIDAATEPVRFRRWLARSPPEDANEPC---------------------------------------------------------------PPDGPGXXXXXXHKHDAVIGEAERDRGNIGGGSPGDCPIAGTGDEFIAWTQTHEWRAFEGGVQRFLFAFTFGAAAIVMSAILWTLSVPWVAWCLLRLAHPVVV-KGADNVEDEEDETNQGLGHLEEEEEMKETVHPGYFRRILMTFLWSAVLVVATAVAAILCASYIFLSVVLWFVGLHMIFKWVRTNWTPKRKGR-PTAMPGQEEGDHWQRAWDLVSLRNHGVREDFDQAHFNVLPFLKSKTGLDRQHLAWLTKARDDKSKSEEDLIDGDRELPGACIDMDNL 1644
RYVFYDTWNF+D STI C+LV F+FRMIA D +F LF+AQFFYA SAPLLFSRLLVLSQID TLGPMTQ VIWRM+S LRFSAFI++VMLSFALAFHAVFHTCGEY +P C +DD FPLRDAFGTFG SFVTVFS+ALGGP+ +L++ GS+CRC LP GAR AGI +MVVY + M+VVLLNLLIAVLSTAH +VY NA+KEFHLARA+L+ QSA+ V H RPPPPLNL+K G LID TE RF W ++ XXXXXX E ++VM +L + +++ K +V E+E N PGY R +L +++V+ A A +LC YI S +LW +G + W N + KR + P A+PGQE G HW+ AW L +LRNHG+RED + HF V+ FLKSKTGLD QHLA + D+KS SE++L++ DREL A ID+ +L
Sbjct: 345 RYVFYDTWNFMDMSTICCILVAFIFRMIARFDSEFDLFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQ-VIWRMMSHMLRFSAFIAMVMLSFALAFHAVFHTCGEYSEPQCTLDDDDPFPLRDAFGTFGDSFVTVFSSALGGPEIDLFDDVGSDCRCNLPRGARSAGISMMVVYTITMSVVLLNLLIAVLSTAHDEVYVNAEKEFHLARARLVVQSAQSVAHLRPPPPLNLIKLGFGVLIDLFTEIWRFILWARSLRSRSYSDSILWELQTLLLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEXXXXXXXXXXXXXXTSLVMMTVLMEDDEEGIHLDTIKMIKTCACWKSEKSVIRSEEENN---------------FSPGYVRELLWVVFALVIMMVSMAFATVLCLLYIVGSGILWIMGTFRLLVWGWNNCSRKRDNKNPEAVPGQEGGSHWENAWKLANLRNHGIREDREHPHFKVVQFLKSKTGLDTQHLAQMANITDEKSNSEKELVEVDRELADAHIDIRHL 942
BLAST of mRNA_Ecto-sp13_S_contig9764.21415.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI) HSP 1 Score: 363 bits (931), Expect = 9.050e-106 Identity = 190/258 (73.64%), Postives = 215/258 (83.33%), Query Frame = 1
Query: 1 RYVFYDTWNFLDTSTIGCLLVTFVFRMIA-LDDDFFLFHAQFFYAASAPLLFSRLLVLSQIDVTLGPMTQQVIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEYEDPACNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCKLPDGAREAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNADKEFHLARAKLIYQSARVVTHRRPPPPLNLVKAVVGTLIDAATEPVRFRRWLARS 771
RYVFYDTWNF+DTSTI C+ V F+FRMIA D +F LF+AQFFYA SAPLLFSRLLVLSQID TLGPMTQ VIWRM+S LRFSAFI++VMLSFALAFHAVFHTCGE+ +P C +DD FPLRDAFGTFG S +TVFS+ALGGP+F+L++ AGS+CRC LP GAR AGI +MVVY + M+VVLLNLLIAVLSTAH +VY NA+KEFHLARA+L+ QSAR V HRRPPPPLNLVK G LID TE RF W ARS
Sbjct: 977 RYVFYDTWNFMDTSTICCIFVAFIFRMIARFDSEFDLFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQ-VIWRMMSHMLRFSAFIAMVMLSFALAFHAVFHTCGEHSEPQCTLDDDDAFPLRDAFGTFGDSLLTVFSSALGGPEFDLFDDAGSDCRCNLPRGARSAGISMMVVYTITMSVVLLNLLIAVLSTAHDEVYVNAEKEFHLARARLVVQSARSVAHRRPPPPLNLVKLGFGVLIDVFTEIWRFILW-ARS 1232
BLAST of mRNA_Ecto-sp13_S_contig9764.21415.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE) HSP 1 Score: 343 bits (881), Expect = 2.230e-97 Identity = 232/578 (40.14%), Postives = 309/578 (53.46%), Query Frame = 1
Query: 1 RYVFYDTWNFLDTSTIGCLLVTFVFRMIAL-------DDDFFLFHAQFFYAASAPLLFSRLLVLSQIDVTLGPMTQQVIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEYEDPACNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCK-LPDGAREAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNADKEFHLARAKLIYQSARVVTHRRPPPPLNLVKAVVGTLIDAATEPVRFRRWLARSPPEDANEPCPPDGPGXXXXXXHKHDAVIGEAERDRGNIGGGSPGDCPIAGTGDEFIAWTQTHEWRAFEGGVQRFLFAFTFGAAAIVMSAILWTLSVPWVAWCLLRLAHPVVVKGADNVEDEEDETNQGLGHLEEEEEMKETVHPGYFRRILMTFLWSAVLVVATAVAAILCASYIFLSVVLWFVGLHMIFKWVRTNWTPKRKGR-----------PTAMPGQEEGDHWQRAWDLVS-LRNHGVREDFDQAHFNVLPFLKSKTGLDRQHLAWLTKARDDKSKSEEDLIDGDRELPGACID---MDNLLKKAAGG 1665
RY+FYDTWN LDT T+ + + F+FR++ + D + F AQFF AASAPLLF+RLL LSQID TLGPM Q +IWRM+S TLRF FI VVM FALAF+AVF +C D L +++G+FG +F+TVF A LG FE ++ G +C P A +AG FL+V Y+V++AVV+LNLLIAVLSTAH +VY N +KEFHLAR +LI QSAR V HRR PPP NLV+ VVG L+D +E W R A+R C + + F T T+ W F+G +QR LFA T G A+ ++A+LW LS+PWVAW R+ V+ K + + +E ET + +++ G FR L FL V A A LC + S VLW G+ +F+W +W +GR PTAMPGQE G +W+ AW V+ RN +R + D HF+V P L++ TGLD + L K + + K++E D G C+ +D+L A GG
Sbjct: 1101 RYLFYDTWNLLDTLTLSTVFLAFIFRLLGIREFGGPADPGDYFFVAQFFLAASAPLLFARLLRLSQIDSTLGPMIQ-IIWRMLSQTLRFGVFIVVVMAGFALAFNAVFGSCDAGSD------------LDESYGSFGTAFLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLVVLAVVMLNLLIAVLSTAHGEVYANGEKEFHLARTRLILQSARAVAHRRIPPPFNLVQLVVGFLLDGVSE---LAWWAVRG------------------------------ADR------------CGLRQHKESFAPITYTYGWHTFDGMLQRLLFASTMGLVAVTLNALLWVLSLPWVAW---RIVCWVLYKVVETGDPDEVETFLSVRLRDKK---------GKFRAFLWVFLGIIACVFALGFAVALCGVCVAGSFVLWLRGVCNVFEWA--HWRLSEEGRFVSGETKKGTCPTAMPGQERGSNWRHAWKYVAKARNFRIRHEHDSEHFHVAPLLQATTGLDMEQFCLLAKEKFN-DKNQEHWADSPS--AGKCVGGGGLDDLELDAGGG 1603
BLAST of mRNA_Ecto-sp13_S_contig9764.21415.1 vs. uniprot
Match: D7FNX2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX2_ECTSI) HSP 1 Score: 266 bits (681), Expect = 1.880e-75 Identity = 179/464 (38.58%), Postives = 240/464 (51.72%), Query Frame = 1
Query: 208 QVIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEYEDPACNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCK-LPDGAREAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNADKEFHLARAKLIYQSARVVTHRRPPPPLNLVKAVVGTLIDAATEPVRFRRWLARSPPEDANEPCPPDGPGXXXXXXHKHDAVIGEAERDRGNIGGGSPGDCPIAGTGDEFIAWTQTHEWRAFEGGVQRFLFAFTFGAAAIVMSAILWTLSVPWVAWCLLRLAHPVVVKGADNVEDEEDETNQGLGHLEEEEEMKETVHPGYFRRILMTFLWSAVLVVATAVAAILCASYIFLSVVLWFVGLHMIFKWVRTNWTPKRKGR----------PTAMPGQEEGDHWQRAWDLVS-LRNHGVREDFDQAHFNVLPFLKSKTGLDRQHLAWLTKAR 1563
Q+IWRM+S TLRF FI VVM FALAF VF +C + D L ++FG+FG +F++VF A LG FE + G++C P A +AG FL+V Y+V++AVV+LNLL+AVL+TAH +V N +KEFHLAR +LI QSAR V HRR PPPLNLV+ +VG L+D E W R DA G C + G+ F+ T T+ W F+G +QR F T G A+ ++++LW LS+PWVAW RL V + A+ +D+EDE E V G R L+ A +A AA LC + I S LWF G+ +++WVR W +G+ PTAMPGQE G +W+ AW V+ RN +R + HF+V P L+S TGLD + L L K +
Sbjct: 3 QIIWRMMSQTLRFGVFIVVVMAGFALAFTTVFGSC------------NADSLLGESFGSFGTAFLSVFEAPLGEFSFEDFHDVGTQCPDNPAPGRASDAGTFLLVAYLVVLAVVMLNLLVAVLTTAHGEVNANGEKEFHLARTRLILQSARAVAHRRIPPPLNLVQLIVGLLLDTVGE----LAWWVRL---DA--------------------------------------GRCKLRQEGEGFVPITATYGWHTFDGTLQRLFFVLTMGLVAVALNSLLWVLSLPWVAW---RLVCWVSYEFANEGDDDEDE------------ETNAPVKRGKLRESLLALGTIAACWLALLFAAALCGACIVGSFFLWFRGVWNVWEWVR--WRRSEEGKFVSGETDQECPTAMPGQEHGQNWRHAWQHVAKARNLRIRHEHGSEHFHVAPLLQSTTGLDMKRLCSLAKKK 392
BLAST of mRNA_Ecto-sp13_S_contig9764.21415.1 vs. uniprot
Match: D7FMR2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR2_ECTSI) HSP 1 Score: 192 bits (488), Expect = 1.030e-46 Identity = 145/428 (33.88%), Postives = 211/428 (49.30%), Query Frame = 1
Query: 1 RYVFYDTWNFLDTSTIGCLLVTFVFRMIALDDDFF---------------LFHAQFFYAASAPLLFSRLLVLSQIDVTLGPMTQQVIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEYEDPACNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCKLPDGAREAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNADKEFHLARAKLIYQSARVVTHRRPPPPLNLVKAVVGTLIDAATE-------PVRFRRWLARSPPEDANEPCPPDG-------------------------------------PGXXXXXXHKHDAVIGEAERDRGNIGGGSPGDCPIAGT-------GDEFIAWTQTHEWRAFEGGVQRFLFAFTFGAAAIVMSAILWTLSVPWVAWCLLR 1086
RY D WN LDT++I C+++ F+FR+IA DF F A+F AA APLLF+R+L L+Q+D T GPMTQ +IW M+ RFS F+ VVM+SFALAFH++ Y DP C+ D+ L +++ T S + +F + LG +F+ +EA C P +AGI L+ +Y+V+ A+++LNLLIAVLST H V +NA EFHLAR++ I SA V R PPPLNL+ A + ++D E +RF ++ P ++ P G P D V GE+ G G G+ A + GD + T+ + GG++R LFA T G A+ +S++LW +S+P +A ++R
Sbjct: 1401 RYFSKDNWNILDTASIFCVMLAFIFRIIAYIADFAQAATTILGNTLIGQAFFIARFSLAAIAPLLFARVLSLAQVDNTFGPMTQ-IIWNMLFHLARFSVFMLVVMVSFALAFHSL------YSDPNCSEGDE----LFESYRTLRESLLDMFRSMLGDANFDRFEA-DRNLTCTGPSWEFDAGITLLTIYIVLQAILMLNLLIAVLSTVHDTVSENAITEFHLARSQFIQASAASVEGGRLPPPLNLLMAAILIVVDVFGEICHWVGKSLRFLSGCGKARPVASSAAVPASGGAGSDPRRRPEERKGPGMISARDVDPVMPGAAAGFTAPAAAPAFDASEDEVKGESGPGVGGGGNILVGNNAKAASSEASRDSGDGLVPMTEWPIAKRAVGGLERLLFALTMGPVALALSSVLWAISIPSLAGRIVR 1816
BLAST of mRNA_Ecto-sp13_S_contig9764.21415.1 vs. uniprot
Match: D8LH98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH98_ECTSI) HSP 1 Score: 178 bits (452), Expect = 2.900e-44 Identity = 107/241 (44.40%), Postives = 142/241 (58.92%), Query Frame = 1
Query: 958 EWRAFEGGVQRFLFAFTFGAAAIVMSAILWTLSVPWVAWCLLRLAHPVVVKGADNVEDEEDETNQ----------GLG-HLEEEEEMKETVHPGYFRRILMTFLWSAVLVVATAVAAILCASYIFLSVVLWFVGLHMIFKWVRTNWTPKRKGR-PTAMPGQEEGDHWQRAWDLVSLRNHGVREDFDQAHFNVLPFLKSKTGLDRQHLAWLTKARDDKSKSEEDLIDGDRELPGACIDMDNL 1644
+W A EG +QR FAFT G A++V+ +LW SVPWVAWC LR P D E +T + G G ++ EEE + PGY R +L V++V+ A AA+ C YI S +LW +G + W N + KR + P AMPGQE+G HW+ AW L +LRNHG+RED + HF V+PFLKSKTGLD QHLA + D+KS SE++L++ DREL A ID+ +L
Sbjct: 251 QWIAVEGFLQRLAFAFTMGGASLVVFTMLWIFSVPWVAWCFLRSLLPP----EDGEEGFHLDTIKMIKTCSCWKGGKGVNIRSEEENNSS--PGYVRELLWVVCALVVMMVSMAFAAVFCLLYIVGSGILWILGTFRLLVWGWNNCSRKRDDKNPEAMPGQEDGSHWENAWKLANLRNHGIREDREHPHFYVVPFLKSKTGLDMQHLARMANIGDEKSNSEKELVEVDRELADARIDIRHL 485
BLAST of mRNA_Ecto-sp13_S_contig9764.21415.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI) HSP 1 Score: 175 bits (444), Expect = 2.210e-41 Identity = 104/206 (50.49%), Postives = 135/206 (65.53%), Query Frame = 1
Query: 1 RYVFYDTWNFLDTSTIGCLLVTFVFRMIAL-------DDDFFLFHAQFFYAASAPLLFSRLLVLSQIDVTLGPMTQQVIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEYEDPACNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCK-LPDGAREAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKV 594
RY+FYDTWN LDT T+ + + FVFR++ + D + F AQFF A SAPLLF+RLL LSQID TLGPM Q +IWRM+S TLRF FI VVM FALAF+AVF +C D L +++G+FG + +TVF A LG FE ++ G +C P A +AG FL+V Y++++AVV+LNLLIAVLSTAH ++
Sbjct: 1099 RYLFYDTWNLLDTLTLSTVFLAFVFRLLGIREFGGPTDPGDYFFVAQFFLAVSAPLLFARLLRLSQIDNTLGPMIQ-IIWRMLSQTLRFGVFIVVVMAGFALAFNAVFGSC------------DAGSGLDESYGSFGTALLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLIVLAVVMLNLLIAVLSTAHGEL 1291 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9764.21415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9764.21415.1 >prot_Ecto-sp13_S_contig9764.21415.1 ID=prot_Ecto-sp13_S_contig9764.21415.1|Name=mRNA_Ecto-sp13_S_contig9764.21415.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=837bp RYVFYDTWNFLDTSTIGCLLVTFVFRMIALDDDFFLFHAQFFYAASAPLLback to top mRNA from alignment at Ecto-sp13_S_contig9764:58..5890+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9764.21415.1 ID=mRNA_Ecto-sp13_S_contig9764.21415.1|Name=mRNA_Ecto-sp13_S_contig9764.21415.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5833bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9764:58..5890+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9764:58..5890+ >mRNA_Ecto-sp13_S_contig9764.21415.1 ID=mRNA_Ecto-sp13_S_contig9764.21415.1|Name=mRNA_Ecto-sp13_S_contig9764.21415.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2511bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9764:58..5890+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |