mRNA_Ecto-sp13_S_contig976.21410.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig976.21410.1 vs. uniprot
Match: A0A6H5KV72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV72_9PHAE) HSP 1 Score: 1704 bits (4413), Expect = 0.000e+0 Identity = 1135/1315 (86.31%), Postives = 1150/1315 (87.45%), Query Frame = 1
Query: 1 QIRGMCVSPDLQCVLCATDGLEGVYLLAVDNLGEEQEARPTPTAGTPSVGGKGTAGNTTGEGNTSHDSAGGDGGVNSXXKRGGETGRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXANAXXXATTARHAPRRAVADAAFPSLVHLASRGEQRKRASGAKARYPSAEPVFIASLGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFECLWWVTRSGNHFAVIGDPDGEVHFLDLERLDAWVIAPPLPFMARGRVCALDIVTDLAGTSQAPPPRAQRTGSGSEPGEASDQXXXXXXXXXXXXAAAAGDRENSHTSLPRHLVAVLHTGAVFIVLLERGHPDDEVGDGGGEGEGDAKNAAKGEAGEEDDKSSSDHIGKVDSHGRDSSSSS--NSPGCLGQQYVCLGADTADQPAFSPVWLDVGRGGXXXXXXXXGVRVIPPSYPPGDXXXXSSLRLRMSIVSRAWGNKCAIKILRVAGTAPGGSAAXXXXXXXXXXXXXXXXXXXXGWGLDWSTASGSTAGKPLPIRTATVRQVNLPVDHPVPEQHSLAAVDGLWAVIASPPAGGAPARVAVAPLGGPDQSAXXXXXXXXXPVCVFPLPVGERVSGVALLPHAGGGHAARASGGRDSNGSSCPGATVPAGSWGLVWSDSCVYRVDLGVGAEAAAPXXXXXXXXXXXXXPXXXRHVAXXXGTTTGAIALRRPSPAAVRRARELHAAGRMSEAARVAIEALDGKNEASTAVTSARGGGRGSGXGGVTTRMVREELANTLLEWLVVLHVRQASSAAGSRLTPADRGPKDGGAEGEAGGVPGSGADVTGSRTRAPENEKSETKRAAVAAGARGVRSAVRRDPKVGRPSSARPASKKHXXXXXXXXXXXXXXXXXXXXXXXXXXLTQPSAKQLESYLLASRDYDPVLAATLLHEHGEADLAVMAGIARGVGVGGAEALPKVLRVLAESAWPPRLGPRAVDTLCGDETGAAARETIQAGGGSLFAALEPGLKLRLLLSSGGTLLGDGGEGAAAVGEEEPEAVAGAGGAARPRAGEAAIARVRSHLGPIIPALSAEELDALVSKLAHWCKEGVVAAVPPSDPAPGRPSETAAXXXXXXXXXDCESSSCILPRLPSSPAAAEALEVLVQALCELSGRSPPPGEGNRRAWLRAGCVTAGSPPAAAAV--LGEPRPRHRLEWARATSSLCDILADESVGLTGGGGCGXXXXXX---PGGVRTEEEGGLPTKARRRLLRVLPIVRGWHDAVGALMRLRGAGCWAAVALQLELSGNVREAASATLHGVVSLLR 3924
+IRGMCVSPDLQCVLCAT+GLEGVYLLAVDNLGEEQEARPTPTAG PSVGGKGTAGNTTGEGNTSHDSAGGD GVNS KRGGETGRS XXXXXXXXXXXXXXXXXXXXXX XXX TARHAPRRAVAD AFPSLVHLASRGEQRKRASGAKARYPSAEPVFIASLGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FECLWWVTRSGNHFAVIGDPDGEVHFLDLE LDAWVIAPPLP MARGRVCALDIVTDLAGTS APPPRAQRTGS XXXXXXXXXXXX SHTSLPRHLVAVLHTGAVFIVLLERGHPDD VGD AKNA KGEAGEED KSS DHIGKVD HGRDSSSSS NSPGCLGQQYVCLGADTADQPAFSPVWLDVGRGGXXXXXXX GVRVIPP YPPGD X SS+RLRMSIVSRAWGNKCA+KILRVAG APGGSAAXXXXXXXXXXXXXXXXXXXXGWGLDWS SGSTAGKPLPIRTATVRQVNLPVDHPVPE HSLAAVDGLWAVIASPPAGGAPARVAVAPLGG DQSA PVCVFPLP GERVSGVALLP AGGG RASGGRDSNGSSCPGATVPAGSWGLVWSD VYRVDLGVGAEAAAP P RHV GTTTGAIALRRPSPAAVRRARELHAAGR+SEAARVAIEALD KNE STAVT ARG X VTTRMVREELANTLLEWLVVLHVRQASSAAGSRL PADR PK GGAE EAG VPGSGADVTGS RA ENEKS+T+RA+V AGARGVRSA+RRDPKVGRPSSARPAS KH XXXXXXXXXXXXXXXXXXXXXXXX L QPSAKQLE YLL SRDYDPVLAATLLHEHGEADLAVMAG+ARGVGVGGAEALPKVLRVLAES+WPPRLGPRAVDTLCGDETGAAARETIQAGGGSLFAALEPGLKLRLLLSS TLLGDGGEGAAAVGEEEPE V GAG AARPRAGEAAIARVRSHLGPI+PALSAEELDALVSKLA WCKEGV+A+VPPSDPA GR SETAA DCESSSCI P S PAAAEA EVLVQALCELSGRSPPPGEGNRRAWLRAGCVTAGSPPAAAA LGEPRPR RLEWARATSSLCDILA+ES GLTGGG XXXXXX P GV TEEEGGLPTKARRRLLRVLPIV GWHDA GALMRLRGAGCWAAVALQLELSGN REAASATLHGVVSLLR
Sbjct: 72 KIRGMCVSPDLQCVLCATEGLEGVYLLAVDNLGEEQEARPTPTAGIPSVGGKGTAGNTTGEGNTSHDSAGGDDGVNSGGKRGGETGRS------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTARHAPRRAVADTAFPSLVHLASRGEQRKRASGAKARYPSAEPVFIASLGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-FECLWWVTRSGNHFAVIGDPDGEVHFLDLEGLDAWVIAPPLPSMARGRVCALDIVTDLAGTSGAPPPRAQRTGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHTSLPRHLVAVLHTGAVFIVLLERGHPDDGVGDXXXXXXXXAKNAVKGEAGEEDGKSSCDHIGKVDGHGRDSSSSSSSNSPGCLGQQYVCLGADTADQPAFSPVWLDVGRGGXXXXXXXMGVRVIPPLYPPGDGGXGSSIRLRMSIVSRAWGNKCAVKILRVAG-APGGSAAXXXXXXXXXXXXXXXXXXXXGWGLDWSPDSGSTAGKPLPIRTATVRQVNLPVDHPVPEHHSLAAVDGLWAVIASPPAGGAPARVAVAPLGGADQSAAHHHNHQ--PVCVFPLPAGERVSGVALLPRAGGGQTTRASGGRDSNGSSCPGATVPAGSWGLVWSDCSVYRVDLGVGAEAAAPPQPAAAASRRPRLPVPPRHVEAATGTTTGAIALRRPSPAAVRRARELHAAGRVSEAARVAIEALDEKNETSTAVTPARGXXXXXXXXXVTTRMVREELANTLLEWLVVLHVRQASSAAGSRLAPADRAPKRGGAEEEAGAVPGSGADVTGSSARAFENEKSKTRRASVTAGARGVRSAIRRDPKVGRPSSARPASNKHEXXXXXXXXXXXXXXXXXXXXXXXX-LAQPSAKQLERYLLESRDYDPVLAATLLHEHGEADLAVMAGVARGVGVGGAEALPKVLRVLAESSWPPRLGPRAVDTLCGDETGAAARETIQAGGGSLFAALEPGLKLRLLLSSRSTLLGDGGEGAAAVGEEEPEPVVGAGRAARPRAGEAAIARVRSHLGPIVPALSAEELDALVSKLAQWCKEGVLASVPPSDPAAGRRSETAAAATAADA--DCESSSCIFPPXXSGPAAAEAFEVLVQALCELSGRSPPPGEGNRRAWLRAGCVTAGSPPAAAAAAGLGEPRPRRRLEWARATSSLCDILANESGGLTGGGXXXXXXXXXXEGPXGVGTEEEGGLPTKARRRLLRVLPIVWGWHDAGGALMRLRGAGCWAAVALQLELSGNEREAASATLHGVVSLLR 1373
BLAST of mRNA_Ecto-sp13_S_contig976.21410.1 vs. uniprot
Match: D8LR69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR69_ECTSI) HSP 1 Score: 1363 bits (3529), Expect = 0.000e+0 Identity = 907/1285 (70.58%), Postives = 927/1285 (72.14%), Query Frame = 1
Query: 1438 MSIVSRAWGNKCAIKILRVAGTAPGGSAAXXXXXXXXXXXXXXXXXXXXGWGLDWSTASGSTAGKPLPIRTATVRQVNLPVDHPVPEQHSLAAVDGLWAVIASPPAGGAPARVAVAPLGGPDQSAXXXXXXXXXPVCVFPLPVGERVSGVALLPHAGGGHAARASGGRDSNGSSCPGATVPAGSWGLVWSDSCVYRVDLGVGAEAAAPXXXXXXXXXXXXXPXXXRHVAXXXGTTTGA--IALRRPSPAAVRRARELHAAGRMSEAARVAIEALDGKNEASTAVTSARGGGRGSGXGGVTTRMVREELANTLLEWLVVLHVRQASSAAGSRLTPADRGPKDGGAEGEAGGVPGSGADVTGSRTRAPENEKSETKRAAVAAGARGVRSAVRRDPKVGRPSSARPASKKHXXXXXXXXXXXXXXXXXXXXXXXXXXLTQPSAKQLESYLLASRDYDPVLAATLLHEHGEADLAVMAGIARGVGVGGAEAL--PKVLRVLAESAWPPRLGPRAVDTLCGDETGAAARETIQAGGGSLFAALEPGLKLRLLLSSGGTLLGDGGEGAAAVGEEEPEAVAGAGGAARPRAGEAAIARVRSHLGPIIPALSAEELDALVSKLAHWCKEGVVAAVPPSDPAPGRPSETAAXXXXXXXXXDCESSSCILPRLPSSPAAAEALEVLVQALCELSGRSPPPGEGNRRAWLRAGCVTA-GSPPAAAAVLGEPRPRHRLEWARATSSLCDILADESVGLTGGGGCGXXXXXXPGGVRTEEEG---GLPTKARRRLLRVLPIVRGWHDAVGALMRLRGAGCWAAVALQLELSGNVREAASATLHGVVSLLREARGGREAPGEAALILGGKGRPFSGVELSHPGPRKTTGGMPVAAATDDEATAETKRVASEAVLRVVNEHVFPKCLRTGDDDKGDGAIDNAGGGXXXXXXXXXXXXXXXXXPSAXXXXXXXXVALPAPAAVILVRASVLAEALCAWRHFELPLPLLEAALRPRLGDRDGVRVLAAVFFPQLSRDHTQPALLSGVPTGGGPRSRGGSRDGWRGQSSLAATGPLRAAAAA--TAVTLSSPGPTMAQMDKARELGLAPQFLLALMRSAGKTPPASAGGRPAAPQTGAPPNVAGPATGPSPLTLMLDHRAGNGGGSSSWLATAAPGRQRSTSAAAGRTRRR-GDRADAASAWPRGPTNSGAAQGDARPSSSSAAADGDCIQDPTIWVFSCGHEFSLGHLLRSVVPASVSSVRQATASLQRTQQVVALEYERGRGGAGAACPECAARELVRLAA 5259
MS+VSRAWGNKCA+KILR+AG APG S XXXXXXXXXXXXX LDWSTASGS AGKP P+RTATVRQVNLPVDHPVPEQHSLAAVDGLWAVIASPPAGG PARVAVAPLGG D S XXXXXXXXXPVCVFPLP GERVSGVALLP AGGG A RASGGRDSNGSSCPGA VPAGS GLVW+DSCVYRVDLGV AEAAAP XXXXXXXXX P XX XXX IALRRPS AAVRRARELHAAGR+SEAARVAIEALDGKNE STAVT ARG X VTTRMVREELANTLLEWLVVLHVRQASSAAGSRL PAD K G E EAGG+P S ADVTGS RAPE EKS+TKRA+VAAG RG RSAVRRDPKVGRPSSARPASKK XXXXXXXXXXXXXXXXXXXXX QPSAKQLE YLLASRDYDPVLA TLLHEHGEADLAVMAGIARGVGVGGAEAL PKVLRVLAESAWPPRLG RAVDTLCGDETGAAARE IQAGGGSLFAALEPGLKLRLLLSS TLLGDGGEGAAAVGEEEPEA GGAARPRAGEAAIARVRSHLGPI+PALSAEELDALVSKLA WCKE VVAAV SDPA RPSET+A DCESSSCI P PSSPAA EALEVLV+ALCELSGRSPPPGE NRRAWLRAGCVT GSPPA GE RPR RLEWARATSSLCD+LADES GLT GG XXXXXX GLP+KARRRLLR+LPIV GWHD V ALMRLRGAGCWAAVALQLELSGN REAASATLHGVVSLLR LSRDH QP L+SGVPTGGGPR RGGSRDGWRGQSSLAATGPLRAAAAA TAVTLSSPGPT+AQMDKARELGLAPQFLLALMRSAGKTPPASAGGRPAA QTG PPNVAGPATGPSPLTLMLDHRAGNGG GDRADAASAWPRGPTNSGAAQGDA PSSSSAAADGDC +DPT+WVFSCGHEFSLGHLLRSVVPASVSSVRQATASLQRTQQVVALEYER RGGAGAACPECAA+ELVRLAA
Sbjct: 1 MSVVSRAWGNKCAVKILRIAGAAPGVSTTAAATAGDXXXXXXXXXXXXXXXXLDWSTASGSAAGKPQPLRTATVRQVNLPVDHPVPEQHSLAAVDGLWAVIASPPAGGGPARVAVAPLGGADHSXXXXXXXXXXPVCVFPLPAGERVSGVALLPRAGGGQAERASGGRDSNGSSCPGAAVPAGSLGLVWTDSCVYRVDLGVRAEAAAPPQXXXXXXXXXRLPVXXXXXXXXXXXXXXXXXIALRRPSAAAVRRARELHAAGRVSEAARVAIEALDGKNETSTAVTPARGXXXXXXXXXVTTRMVREELANTLLEWLVVLHVRQASSAAGSRLAPADDALKRGSGEEEAGGLPDSCADVTGSSARAPEKEKSKTKRASVAAGGRGGRSAVRRDPKVGRPSSARPASKKXXXXXXXXXXXXXXXXXXXXXXVAS---AQPSAKQLERYLLASRDYDPVLATTLLHEHGEADLAVMAGIARGVGVGGAEALALPKVLRVLAESAWPPRLGSRAVDTLCGDETGAAAREAIQAGGGSLFAALEPGLKLRLLLSSRSTLLGDGGEGAAAVGEEEPEAAXXXGGAARPRAGEAAIARVRSHLGPIVPALSAEELDALVSKLAQWCKEDVVAAVATSDPAARRPSETSAAATAADA--DCESSSCIAPP-PSSPAAVEALEVLVEALCELSGRSPPPGEDNRRAWLRAGCVTTTGSPPAVVPARGEARPRRRLEWARATSSLCDLLADESGGLTSGGXXXXXXXXXXXXXXXXXXXXXXGLPSKARRRLLRILPIVWGWHDPVSALMRLRGAGCWAAVALQLELSGNEREAASATLHGVVSLLR-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSRDHAQPDLVSGVPTGGGPRGRGGSRDGWRGQSSLAATGPLRAAAAAAATAVTLSSPGPTVAQMDKARELGLAPQFLLALMRSAGKTPPASAGGRPAAQQTGTPPNVAGPATGPSPLTLMLDHRAGNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDRADAASAWPRGPTNSGAAQGDAPPSSSSAAADGDCSEDPTVWVFSCGHEFSLGHLLRSVVPASVSSVRQATASLQRTQQVVALEYERDRGGAGAACPECAAKELVRLAA 1100
BLAST of mRNA_Ecto-sp13_S_contig976.21410.1 vs. uniprot
Match: A0A6H5KMZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMZ6_9PHAE) HSP 1 Score: 549 bits (1415), Expect = 7.040e-176 Identity = 337/407 (82.80%), Postives = 347/407 (85.26%), Query Frame = 1
Query: 4066 DEATAETKRVASEAVLRVVNEHVFPKCLRTGDDDKGDG----AIDNAGGGXXXXXXXXXXXXXXXXXPSAXXXXXXXXVA-----LPAPAAVILVRASVLAEALCAWRHFELPLPLLEAALRPRLGDRDGVRVLAAVFFPQLSRDHTQPALLSGVPTGGGPRSRGGSRDGWRGQSSLAATGPLRAAAAATAVTLSSPGPTMAQMDKARELGLAPQFLLALMRSAGKTPPASAGGRPAAPQTGAPPNVAGPATGPSPLTLMLDHRAGNGGGSSSWLATAAPGRQRSTSAAAGRTRRRGDRADAASAWPRGPTNSGAAQGDARPSSSSAAADGDCIQDPTIWVFSCGHEFSLGHLLRSVVPASVSSVRQATASLQRTQQVVALEYERGRGGAGAACPECAARELVRLAA 5259
DEATAETKR A EA LRVVNEHVFP CLRTG+DD G AIDN XXXXXX XXXXXX XXXXXXXX LPAPAAVIL RASVLAE+LCAWRHF+LPLP LEAALR RLGDRDGVRVLAAVFFPQLSRDHTQ L+SGVPTGGGPR RGGSRDGWRGQSSLAATGPL AAA TAVTLSS GPT+AQMDKARELGLAP FLLALMRSAGKTP ASA GRPAA QT +PPNVAGPAT PSPLTLMLDHRAGNGG SSSWLA AAPGR+RS R R RGDR DAASAWPRGPTNSGAAQGDA PSSSSAAADG C++DPTIWVFSCGHEFSLGHLLRSVVPASVSSVRQATASLQRTQQVVALEYERGR GAGAACPECAA+ELVRLAA
Sbjct: 23 DEATAETKRAAIEATLRVVNEHVFPTCLRTGNDDPGXXXXXXAIDNXXXXXXXXXXDDGSSXXXXXXXXXXXXXXXXXXXXXXXXLPAPAAVILARASVLAESLCAWRHFDLPLPPLEAALRRRLGDRDGVRVLAAVFFPQLSRDHTQLGLVSGVPTGGGPRGRGGSRDGWRGQSSLAATGPLLAAAG-TAVTLSSLGPTVAQMDKARELGLAPHFLLALMRSAGKTPAASARGRPAAQQTDSPPNVAGPATEPSPLTLMLDHRAGNGGASSSWLAAAAPGRERSXXXXXXRRRMRGDRTDAASAWPRGPTNSGAAQGDAPPSSSSAAADGGCLEDPTIWVFSCGHEFSLGHLLRSVVPASVSSVRQATASLQRTQQVVALEYERGRSGAGAACPECAAKELVRLAA 428
BLAST of mRNA_Ecto-sp13_S_contig976.21410.1 vs. uniprot
Match: A0A6H5L4E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E8_9PHAE) HSP 1 Score: 283 bits (724), Expect = 3.690e-74 Identity = 311/730 (42.60%), Postives = 346/730 (47.40%), Query Frame = 1
Query: 3217 PIIPA-LSAEELDALVSKLAHWCKEG-VVAAVPPSDPAPGRPSETAAXXXXXXXXXDCESSSCILPRLPSSPAAAEALEVLVQALCELSGRSPPPGEGNRRAWLRAGCVTAGSPPAAAAVLGEPRPRHR-LEWARATSSLCDILADESVGLTGGGGCGXXXXXX--PGGVRTEEEGGLPTKARRRLLRVLPIVRGWHDAVGALMRLRGAGCW-----AAVALQLELSGNVREAASATLHGVVS--LLREARGGREAPGEAALILGGKGRPFSG---VELSHPGPRKTTGGMPVAAATDDEATAETKRVASEAVLRVVNEHVFP---KCLRT-GDDDKGDGAIDNA----------------------GGGXXXXXXXXXXXXXXXXXPSAXXXXXXXXVALPAPAAVILVRASVLAEALCAWRHFELPLPLLEAALRPRLGDRDGVRVLAAVFFPQLSRDHTQPAL--LSGVPTGGGPRSRGGSRDGWRGQSSLAATGPLRAAAAATAVTLSSPGPTMAQMDKARELGLAPQFLLALMRSAGKTPPASAGGRPAAPQTGAPPNVAGPATGPSPLTLMLDHRAGNGGGSSSWLATAAPGRQRSTSAAAGRTRRRGDRADAASAWPR--GP---TNSGAAQGDARPSSSSAAADGDCIQDPTIWVFSCGHEFSLGHLLRSVVPASVSSVRQATASLQRTQQVVALEYERGRGGAGAACPECAARELVRLAAA 5262
PI+PA LS+EELDALVS+LA WCKE VVA VPPSD G+ + + C R G R R GE RPR R LEWA TSSLCDILADES G T G XXXXXX PGGV TEEEGGLP+KARR LLRVLP+VRG H+ VGALMRLRGAGCW AA A++ G+V EA GVV R+AR PG G +G F ++ P P + + TKR + + + C R G D G G XXXXXXXXXXXXXXXXX XX ALPAPAAVI RASVLAEALCAW+ FEL SR +P L G G PR+ L LMRSAGK P ASA G PA QTGAPP+VAGPAT P PLTLML H A GG +W R+R A R RG + PR P NSGAAQGD PSSS AAAD + + PT WVFSCGHEFSLGHLL+SVVPAS SS+RQATASLQRT+QVVALEYERGRG AGAACPECAA+ LV+LAAA
Sbjct: 23 PIVPAALSSEELDALVSRLAQWCKEDDVVATVPPSDARYGK---------------------------------------IKRHRCRRHHR-----RGMREQQPR----------------GERRPRRRPLEWAGVTSSLCDILADESGGPTSGXXXXXXXXXXEGPGGVGTEEEGGLPSKARRCLLRVLPVVRGLHNPVGALMRLRGAGCWGSGGAAAGAVRERARGSVGEATRGG--GVVEEDRRRDARHFTAVPG----ARGEQGTSFEADLILKNIVPSPASNSLLQGRRRRQEXXXXLTTKRRPRPSEWQAKPRFAWSTRTSCQRACGGGDNAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXPSAVVAAALPAPAAVIFGRASVLAEALCAWQPFEL-----------------------------TSRRWRRPCGRGLDGQGEGVWPRAT---------------------------------------------------VFLTLMRSAGKMPAASAEGHPAVQQTGAPPDVAGPATRPFPLTLMLGHLADKGG---AWR------RRRHPGAHGQRRPPRGGGREETVRMPRVLDPGVLPNSGAAQGDGPPSSSPAAADREYSEGPTAWVFSCGHEFSLGHLLQSVVPASASSIRQATASLQRTKQVVALEYERGRG-AGAACPECAAKGLVQLAAA 596
BLAST of mRNA_Ecto-sp13_S_contig976.21410.1 vs. uniprot
Match: D8LR68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR68_ECTSI) HSP 1 Score: 205 bits (521), Expect = 2.010e-54 Identity = 219/284 (77.11%), Postives = 226/284 (79.58%), Query Frame = 1
Query: 1 QIRGMCVSPDLQCVLCATDGLEGVYLLAVDNLGEEQEARPTPTAGTPSVGGKGTAGNTTGEGNTSHDSAGGDGGVNSXXKRGGETGRSGXXXXXXXXXXXXXXXXXXXXXXXXXXX-----ANAXXXATTARHAPRRAVADAAFPSLVHLASRGEQRKRASGAKARYPSAE------------------------PVFIASLGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFECLWWVTRSGNHFAVIGDPDGE 765
+IRGMCVSPDLQCVLCAT+GLEGVYLLAVDNLGEEQEARPTPTAG PSVGGKGTAGN TGE GDGGVNS KRG ETG +GXXXXXXXXXXXXXXXXXXXXXXXXXXX A+A TTARHAPRRA AD AFP LV+LASRGE RK +G KA Y SA+ PVFIASLGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FECLWWVTRSGNHFAVIGDPDGE
Sbjct: 72 KIRGMCVSPDLQCVLCATEGLEGVYLLAVDNLGEEQEARPTPTAGIPSVGGKGTAGNMTGEXXXXXXXXDGDGGVNSGGKRGSETGTTGXXXXXXXXXXXXXXXXXXXXXXXXXXXPVMAGASAGATPTTARHAPRRAAADTAFPILVNLASRGEHRKMTNGIKAPYYSADSVFRLHHGVRKRASXXXXXXXXXXPVFIASLGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-FECLWWVTRSGNHFAVIGDPDGE 354
BLAST of mRNA_Ecto-sp13_S_contig976.21410.1 vs. uniprot
Match: D7G121_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G121_ECTSI) HSP 1 Score: 128 bits (321), Expect = 5.940e-30 Identity = 67/88 (76.14%), Postives = 69/88 (78.41%), Query Frame = 2
Query: 4973 TAAPRKETRGHHRRLPPLTEIVFRTQPFGSFPAGTSSRWGTFSGAWSRRASRASARPRPPCSARSRWWRWSTSGAAAAPGRRARSARR 5236
TAAP KET HH RLPPL E + R P G FPAGTSSRWGTFSGAW R A RAS RPRPPC+ARSRWWRWS SG A APGRRAR ARR
Sbjct: 92 TAAPLKETGRHHHRLPPLMENIRRAIPLGCFPAGTSSRWGTFSGAWCRLARRASVRPRPPCNARSRWWRWSASG-ATAPGRRARCARR 178 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig976.21410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig976.21410.1 >prot_Ecto-sp13_S_contig976.21410.1 ID=prot_Ecto-sp13_S_contig976.21410.1|Name=mRNA_Ecto-sp13_S_contig976.21410.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1802bp MCVSPDLQCVLCATDGLEGVYLLAVDNLGEEQEARPTPTAGTPSVGGKGTback to top mRNA from alignment at Ecto-sp13_S_contig976:12871..19687- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig976.21410.1 ID=mRNA_Ecto-sp13_S_contig976.21410.1|Name=mRNA_Ecto-sp13_S_contig976.21410.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6817bp|location=Sequence derived from alignment at Ecto-sp13_S_contig976:12871..19687- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig976:12871..19687- >mRNA_Ecto-sp13_S_contig976.21410.1 ID=mRNA_Ecto-sp13_S_contig976.21410.1|Name=mRNA_Ecto-sp13_S_contig976.21410.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=5406bp|location=Sequence derived from alignment at Ecto-sp13_S_contig976:12871..19687- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |