mRNA_Ecto-sp13_S_contig9716.21354.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9716.21354.1
Unique NamemRNA_Ecto-sp13_S_contig9716.21354.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9716.21354.1 vs. uniprot
Match: D8LJK0_ECTSI (Acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK0_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 4.020e-62
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1
Query:    1 VCGWCYLFVITLVLLALHALVFKSVYTLAAVSLLLGNFLWWPVNNTCYPYEAFCNSWLFAVWRRYFRWQCVLEEPLDPDKRYMFAEMPHGVM 276
            VCGWCYLFVITLVLLALHALVFKSVYTLAAVSLLLGNFLWWPVNNTCYPYEAFCNSWLFAVWRRYFRWQCVLEEPLDPDKRYMFAEMPHGVM
Sbjct:   91 VCGWCYLFVITLVLLALHALVFKSVYTLAAVSLLLGNFLWWPVNNTCYPYEAFCNSWLFAVWRRYFRWQCVLEEPLDPDKRYMFAEMPHGVM 182          
BLAST of mRNA_Ecto-sp13_S_contig9716.21354.1 vs. uniprot
Match: A0A835ZF37_9STRA (Acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF37_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.190e-20
Identity = 44/92 (47.83%), Postives = 64/92 (69.57%), Query Frame = 1
Query:    1 VCGWCYLFVITLVLLALHALVFKSVYTLAAVSLLLGNFLWWPVNNTCYPYEAFCNSWLFAVWRRYFRWQCVLEEPLDPDKRYMFAEMPHGVM 276
            VCGW Y+ ++    L +HA+  + V++ +  +LLL +  W+P++N  YP+EAF +  LF +WRRYF W C + E LDP +RYMFAEMPHGV+
Sbjct:  105 VCGWFYMILLLEAALVIHAVACQCVWSGSIAALLLAS-CWFPLDNR-YPWEAFIHGPLFKLWRRYFDWSCEVHEQLDPSRRYMFAEMPHGVI 194          
BLAST of mRNA_Ecto-sp13_S_contig9716.21354.1 vs. uniprot
Match: A0A6V1SPI9_HETAK (Acyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SPI9_HETAK)

HSP 1 Score: 79.0 bits (193), Expect = 2.900e-15
Identity = 36/92 (39.13%), Postives = 56/92 (60.87%), Query Frame = 1
Query:    4 CGWCYLFVITLVLLALHALVFKSVY--TLAAVSLLLGNFLWWPVNNTCYPYEAFCNSWLFAVWRRYFRWQCVLEEPLDPDKRYMFAEMPHGV 273
            CGW Y+ +     L+   L  + V   T+ A  + +G   +WP ++T  P+E+F  SW+F VWR+YF W+  +  PLDP ++Y+FAE PHG+
Sbjct:   64 CGWAYVLIALYAWLSYKVLAHQDVVAGTVLATIISMG---YWPADHT--PWESFLRSWVFRVWRKYFDWEMKITVPLDPKRKYLFAEFPHGI 150          
BLAST of mRNA_Ecto-sp13_S_contig9716.21354.1 vs. uniprot
Match: A0A290G0P1_9STRA (Acyltransferase n=2 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A290G0P1_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.820e-12
Identity = 37/90 (41.11%), Postives = 59/90 (65.56%), Query Frame = 1
Query:    7 GWCYLFVITLVLLALHALVFKSVYTLAA-VSLLLGNFLWWPVNNTCYPYEAFCNSWLFAVWRRYFRWQCVLEEPLDPDKRYMFAEMPHGV 273
             W Y+ VI  +L  +   +F +   +AA V +L+ +    P++     ++AFCNS++F +WR YF ++ VLEE +DP+KRY+FAEMPHG+
Sbjct:   70 SWYYIVVILSLLCLVGICIFPAWRAVAATVFMLMWSAALLPLDYQ--GWDAFCNSFIFRLWRDYFHYEYVLEEMIDPNKRYLFAEMPHGI 157          
BLAST of mRNA_Ecto-sp13_S_contig9716.21354.1 vs. uniprot
Match: W7T9Y9_9STRA (Acyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T9Y9_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.480e-12
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 1
Query:    7 GWCYLFVITLVLLALHALVFKSVYTLAAVS-LLLGNFLWWPVNNTCYPYEAFCNSWLFAVWRRYFRWQCVLEEPLDPDKRYMFAEMPHGV 273
             W YL VI L LL +  L F +   +A  + +L+ +  + P++     ++AFCNS+LF +WR YF ++ +LEE +DP KRY+FAEMPHG+
Sbjct:   68 SWYYLVVI-LSLLCVAGLFFPTWRVVAGTAFVLMWSAAFLPLDYQ--GWDAFCNSFLFKLWRDYFHYEYILEEAIDPKKRYLFAEMPHGI 154          
BLAST of mRNA_Ecto-sp13_S_contig9716.21354.1 vs. uniprot
Match: D8TL45_VOLCA (Acyltransferase n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TL45_VOLCA)

HSP 1 Score: 62.4 bits (150), Expect = 2.420e-9
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 1
Query:  157 FCNSWLFAVWRRYFRWQCVLEEPLDPDKRYMFAEMPHGV 273
            FC SW+F  WR YF +  + EE LDP+K+Y+FAE PHGV
Sbjct:   82 FCRSWIFRTWREYFMFSYMFEEVLDPNKKYIFAEFPHGV 120          
BLAST of mRNA_Ecto-sp13_S_contig9716.21354.1 vs. uniprot
Match: A0A2J8A0Q9_9CHLO (Acyltransferase n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A0Q9_9CHLO)

HSP 1 Score: 61.6 bits (148), Expect = 4.820e-9
Identity = 24/49 (48.98%), Postives = 31/49 (63.27%), Query Frame = 1
Query:  124 PVNNTCYPYEAFCNSWLFAVWRRYFRWQCVLEEPLDPDKRYMFAEMPHG 270
            P     +P  AF   W+F  WR YF +  ++EEPLDP+KRY+F E PHG
Sbjct:   95 PARPVLWP--AFNRLWIFKTWRHYFHYSFLVEEPLDPEKRYIFVEFPHG 141          
BLAST of mRNA_Ecto-sp13_S_contig9716.21354.1 vs. uniprot
Match: A8INZ7_CHLRE (Acyltransferase n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8INZ7_CHLRE)

HSP 1 Score: 61.2 bits (147), Expect = 6.600e-9
Identity = 24/49 (48.98%), Postives = 31/49 (63.27%), Query Frame = 1
Query:  124 PVNNTCYPYEAFCNSWLFAVWRRYFRWQCVLEEPLDPDKRYMFAEMPHG 270
            P     +P  AF   W+F  WR YF +  ++EEPLDP+KRY+F E PHG
Sbjct:   95 PCKPVLWP--AFNKLWIFKTWRHYFHYSFLIEEPLDPNKRYIFVEFPHG 141          
BLAST of mRNA_Ecto-sp13_S_contig9716.21354.1 vs. uniprot
Match: A0A8J4C400_9CHLO (Acyltransferase n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4C400_9CHLO)

HSP 1 Score: 61.2 bits (147), Expect = 6.600e-9
Identity = 34/76 (44.74%), Postives = 41/76 (53.95%), Query Frame = 1
Query:   43 LALHALVFKSVYTLAAVSLLLGNFLWWPVNNTCYPYEAFCNSWLFAVWRRYFRWQCVLEEPLDPDKRYMFAEMPHG 270
            L L  L F S   L  V +LLG  L  P     +P  AF   W+F  WR YF +  ++EEPLDP KRY+  E PHG
Sbjct:   69 LLLVILSFWSRVALYVVLVLLGTLLL-PCKPVLWP--AFNRLWIFKTWRHYFHYSFLIEEPLDPKKRYIIVEFPHG 141          
BLAST of mRNA_Ecto-sp13_S_contig9716.21354.1 vs. uniprot
Match: A0A699ZGU2_HAELA (Uncharacterized protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZGU2_HAELA)

HSP 1 Score: 59.7 bits (143), Expect = 1.570e-8
Identity = 24/50 (48.00%), Postives = 29/50 (58.00%), Query Frame = 1
Query:  121 WPVNNTCYPYEAFCNSWLFAVWRRYFRWQCVLEEPLDPDKRYMFAEMPHG 270
            W V      + AFC  W+F  WR+YFR+    EE LDP KRY+  E PHG
Sbjct:   34 WVVAAKPVLWTAFCKLWVFKTWRQYFRYSYFFEEKLDPTKRYILYEAPHG 83          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9716.21354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LJK0_ECTSI4.020e-62100.00Acyltransferase n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A835ZF37_9STRA1.190e-2047.83Acyltransferase n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A6V1SPI9_HETAK2.900e-1539.13Acyltransferase n=1 Tax=Heterosigma akashiwo TaxID... [more]
A0A290G0P1_9STRA1.820e-1241.11Acyltransferase n=2 Tax=Nannochloropsis oceanica T... [more]
W7T9Y9_9STRA2.480e-1243.33Acyltransferase n=3 Tax=Monodopsidaceae TaxID=4250... [more]
D8TL45_VOLCA2.420e-958.97Acyltransferase n=1 Tax=Volvox carteri f. nagarien... [more]
A0A2J8A0Q9_9CHLO4.820e-948.98Acyltransferase n=1 Tax=Tetrabaena socialis TaxID=... [more]
A8INZ7_CHLRE6.600e-948.98Acyltransferase n=3 Tax=Chlamydomonas TaxID=3052 R... [more]
A0A8J4C400_9CHLO6.600e-944.74Acyltransferase n=3 Tax=Volvox TaxID=3066 RepID=A0... [more]
A0A699ZGU2_HAELA1.570e-848.00Uncharacterized protein (Fragment) n=1 Tax=Haemato... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9716contigEcto-sp13_S_contig9716:3921..4779 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score199.9
Seed ortholog evalue5.4e-49
Seed eggNOG ortholog2880.D8LJK0
Model size289
KEGG rclassRC00004,RC00037
KEGG koko:K14457
KEGG ReactionR03755,R03756
KEGG Pathwayko00561,ko04975,map00561,map04975
Hectar predicted targeting categorysignal peptide
Exons3
EggNOG free text desc.2-acylglycerol O-acyltransferase activity
EggNOG OGsKOG0831@1,KOG0831@2759
Ec32 ortholog descriptionmono-or diacylglycerol acyltransferase type 2
Ec32 orthologEc-17_002290.1
EC2.3.1.22
Cds size288
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464235.171018-CDS-Ecto-sp13_S_contig9716:3920..40421681464235.171018-CDS-Ecto-sp13_S_contig9716:3920..4042Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9716 3921..4042 +
1681464235.184796-CDS-Ecto-sp13_S_contig9716:4368..44461681464235.184796-CDS-Ecto-sp13_S_contig9716:4368..4446Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9716 4369..4446 +
1681464235.1958475-CDS-Ecto-sp13_S_contig9716:4691..47791681464235.1958475-CDS-Ecto-sp13_S_contig9716:4691..4779Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9716 4692..4779 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9716.21354.1prot_Ecto-sp13_S_contig9716.21354.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9716 3921..4779 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9716.21354.1

>prot_Ecto-sp13_S_contig9716.21354.1 ID=prot_Ecto-sp13_S_contig9716.21354.1|Name=mRNA_Ecto-sp13_S_contig9716.21354.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=96bp
VCGWCYLFVITLVLLALHALVFKSVYTLAAVSLLLGNFLWWPVNNTCYPY
EAFCNSWLFAVWRRYFRWQCVLEEPLDPDKRYMFAEMPHGVMVRY*
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mRNA from alignment at Ecto-sp13_S_contig9716:3921..4779+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9716.21354.1 ID=mRNA_Ecto-sp13_S_contig9716.21354.1|Name=mRNA_Ecto-sp13_S_contig9716.21354.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=859bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9716:3921..4779+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTGTGCGGCTGGTGCTACTTGTTTGTGATCACCTTGGTACTGCTCGCCCT ACACGCCCTCGTCTTTAAGTCCGTCTACACGCTTGCGGCGGTTTCGCTCC TGCTCGGCAACTTCCTGTGGTGGTGAGCACAACAACATCTGCAAGGACTC TCGACGACAGCGACACCGTTTGGTGTTCTGTGTTTTCGGAGTACTTCTGC TTTGTTTCAACCGACGACGTGCATCTGCTCGTCGTTTGATAAGCAACACG TTTGTTCTGTCGCATTGCTGAATCAAAACGATGTGTTCACTTGATAAAAG CGCGTTGTGTCCCGTGGCCGCATCCCAAAACGACCCGCTATTCGGATGAT CAACGGTGGTGGTGTTCGAAAAACGCTCTTCGACGCGATATGGGGTGTGT GCCACAAGTTCGTACTCACTGGCTTTGATGAACGGTTTTGTTGAACAGGC CGGTGAACAACACCTGCTATCCTTACGAGGCATTCTGCAACTCATGGCTG TTCGCGGTGTGGCGGAGGTATTTCAGGTGCGGGACGAGGGTCGCAGGGTA CGTCGCGAAGCTTTGAAGTACAATTTCGTTGTTGGGGGGGAGGCATGGAA TGCTATGTTAAAGTGGGGCTCGCTGGTTGTCCAAAGAATCTTGCGTGCGG CGTCAGGCGATCGATTCAAGCAAAGAGATCACTGAGCATTGAATAAACTG GACAATGCTCTTGTTGGCATGCGTCACTACACTACACGACCTTTCGGCAC GTAACGACCCCCTGTTTTCAGGTGGCAGTGCGTGCTCGAAGAGCCCCTGG ATCCGGACAAGCGCTACATGTTTGCCGAGATGCCGCACGGAGTGATGGTG AGGTATTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9716:3921..4779+

>mRNA_Ecto-sp13_S_contig9716.21354.1 ID=mRNA_Ecto-sp13_S_contig9716.21354.1|Name=mRNA_Ecto-sp13_S_contig9716.21354.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=288bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9716:3921..4779+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTGTGCGGCTGGTGCTACTTGTTTGTGATCACCTTGGTACTGCTCGCCCT
ACACGCCCTCGTCTTTAAGTCCGTCTACACGCTTGCGGCGGTTTCGCTCC
TGCTCGGCAACTTCCTGTGGTGGCCGGTGAACAACACCTGCTATCCTTAC
GAGGCATTCTGCAACTCATGGCTGTTCGCGGTGTGGCGGAGGTATTTCAG
GTGGCAGTGCGTGCTCGAAGAGCCCCTGGATCCGGACAAGCGCTACATGT
TTGCCGAGATGCCGCACGGAGTGATGGTGAGGTATTAG
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