prot_Ecto-sp13_S_contig97159.21353.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig97159.21353.1
Unique Nameprot_Ecto-sp13_S_contig97159.21353.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length43
Homology
BLAST of mRNA_Ecto-sp13_S_contig97159.21353.1 vs. uniprot
Match: A0A6H5JQ48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ48_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.480e-19
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 0
Query:    1 MAPASPSEEITALCRQPKYRSRVIYFRGSVTNPRDMAAVCAE 42
            MAPASPSEEITALCRQPKYRSRVIYFRGSVTNPRDMAAVCAE
Sbjct:  335 MAPASPSEEITALCRQPKYRSRVIYFRGSVTNPRDMAAVCAE 376          
BLAST of mRNA_Ecto-sp13_S_contig97159.21353.1 vs. uniprot
Match: D8LEK1_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK1_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 2.580e-19
Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 0
Query:    1 MAPASPSEEITALCRQPKYRSRVIYFRGSVTNPRDMAAVCAE 42
            MAPASPSEEI+ALCRQPKYRSRVIYFRGSVTNPRDMAAVCAE
Sbjct:  233 MAPASPSEEISALCRQPKYRSRVIYFRGSVTNPRDMAAVCAE 274          
BLAST of mRNA_Ecto-sp13_S_contig97159.21353.1 vs. uniprot
Match: A0A6H5K4I5_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I5_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.420e-8
Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    1 MAPASPSEEITALCRQPKYRSRVIYFRGSVTNPRDMAAVCAE 42
            M+P+SPS E+ ++ R P + SRVIYFRGSV +P DM AVCAE
Sbjct:  330 MSPSSPSPEVLSVIRSPLFMSRVIYFRGSVMDPLDMNAVCAE 371          
BLAST of mRNA_Ecto-sp13_S_contig97159.21353.1 vs. uniprot
Match: D7FXB0_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXB0_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 6.560e-8
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    1 MAPASPSEEITALCRQPKYRSRVIYFRGSVTNPRDMAAVCAE 42
            M+P+ PS E+ ++ R P + SRVIYFRGSV +P DM AVCAE
Sbjct:  289 MSPSPPSPEVLSVIRSPLFMSRVIYFRGSVMDPLDMNAVCAE 330          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig97159.21353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JQ48_9PHAE1.480e-19100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEK1_ECTSI2.580e-1997.62Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K4I5_9PHAE1.420e-861.90Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FXB0_ECTSI6.560e-859.52Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig97159contigEcto-sp13_S_contig97159:47..175 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig97159.21353.1mRNA_Ecto-sp13_S_contig97159.21353.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig97159 41..175 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig97159.21353.1 ID=prot_Ecto-sp13_S_contig97159.21353.1|Name=mRNA_Ecto-sp13_S_contig97159.21353.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=43bp
MAPASPSEEITALCRQPKYRSRVIYFRGSVTNPRDMAAVCAE*
back to top