mRNA_Ecto-sp13_S_contig9703.21339.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9703.21339.1 vs. uniprot
Match: A0A6H5KKV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV2_9PHAE) HSP 1 Score: 624 bits (1609), Expect = 3.080e-220 Identity = 334/344 (97.09%), Postives = 338/344 (98.26%), Query Frame = 1
Query: 1 GALGSTPVSSARVGERLRVRCTRGIHARGGGARHGRDGIRRPWRRSAVSIDEVEVEEDSKGVAATIEGGWGEQKDDSNVSYTRMLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAMNGLGDWVAVCKMGMGVFGAAAATASAETVSMVLLGLAVWRAQGERVYKFVELPSAEELKVFLDFAGPIAFALLGKVLCYSVMTITVTAIGPLPLATHNV 1032
GA GSTPVSSARVGERLRVRCTRGIHARGGG RHGRDGIRRPWRRSA++ DEVEVEEDSKGVAA IEGGWGEQKDD NVSYTRMLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAMNGLGDWV VC+MGMGVFGAAAATASAETVSMVLLGLAVWRAQGERVYKFVELPSAEELKVFLDFAGPIAFALLGKVLCYSVMT+TVTAIGPLPLATHNV
Sbjct: 49 GAPGSTPVSSARVGERLRVRCTRGIHARGGGDRHGRDGIRRPWRRSAMATDEVEVEEDSKGVAAMIEGGWGEQKDDGNVSYTRMLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAMNGLGDWVTVCRMGMGVFGAAAATASAETVSMVLLGLAVWRAQGERVYKFVELPSAEELKVFLDFAGPIAFALLGKVLCYSVMTLTVTAIGPLPLATHNV 392
BLAST of mRNA_Ecto-sp13_S_contig9703.21339.1 vs. uniprot
Match: D7G808_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G808_ECTSI) HSP 1 Score: 537 bits (1383), Expect = 2.030e-188 Identity = 288/297 (96.97%), Postives = 294/297 (98.99%), Query Frame = 1
Query: 142 VSIDEVEVEEDSKGVAATIEGGWGEQKDDSNVSYTRMLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAMNGLGDWVAVCKMGMGVFGAAAATASAETVSMVLLGLAVWRAQGERVYKFVELPSAEELKVFLDFAGPIAFALLGKVLCYSVMTITVTAIGPLPLATHNV 1032
++ID VEVEEDSKGVAATIEGGWGEQKDD NVSYTRMLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSR+RILGAPASIAAMVLQAACLGARDSVTPLGVVLIASA+NGLGDWV VC+MGMGVFGAAAATASAETVSMVLLGLAVWRAQGERVYKFVELPSAEELKVFLDFAGPIAFALLGKVLCYSVMT+TVTAIGPLPLATHNV
Sbjct: 1 MAIDGVEVEEDSKGVAATIEGGWGEQKDDGNVSYTRMLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRMRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAVNGLGDWVTVCRMGMGVFGAAAATASAETVSMVLLGLAVWRAQGERVYKFVELPSAEELKVFLDFAGPIAFALLGKVLCYSVMTLTVTAIGPLPLATHNV 297
BLAST of mRNA_Ecto-sp13_S_contig9703.21339.1 vs. uniprot
Match: A0A835YQ91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ91_9STRA) HSP 1 Score: 212 bits (540), Expect = 1.180e-61 Identity = 126/243 (51.85%), Postives = 167/243 (68.72%), Query Frame = 1
Query: 301 MSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAMNGLGDWVAVCKMGMGVFGAAAATASAETVSMVLLGLAVWRAQGERVYKFVELPSAEELKVFLDFAGPIAFALLGKVLCYSVMTITVTAIGP-LPLATH 1026
MSLVD GVVG RS+ +LA+LGPAT LC+SL+Y FL+IA TNL A+ALA+G + E+QKVV+QAL + L+ G +++ V FG R++ AG + + P AL YS +R++GAPA +A+M+ QAACLG++DSVTPL VVL A N +GD V MGMG+ GAA AT+ +E + M LL AV R QG RVY F+ +P ++ F+ FAGPI LL K+L YS MT+ VT G + LA H
Sbjct: 1 MSLVDTGVVGQRSSLDLAALGPATNLCDSLLYGCAFLSIATTNLLASALANGDKRESQKVVSQALAIGLTFGTALSIAVFLFGTRMMLWSAGGNAA-IAPIALKYSNIRMIGAPACLASMIAQAACLGSKDSVTPLFVVLACGAFNAVGDVFLVRTMGMGIRGAAIATSVSEVIGMGLLMRAVARMQGPRVYPFIAMPGRQDFWKFMTFAGPIFVTLLCKILFYSGMTVLVTGGGDTVMLAAH 242
BLAST of mRNA_Ecto-sp13_S_contig9703.21339.1 vs. uniprot
Match: W7TLJ7_9STRA (Dna-damage-inducible protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLJ7_9STRA) HSP 1 Score: 216 bits (551), Expect = 1.650e-61 Identity = 132/263 (50.19%), Postives = 170/263 (64.64%), Query Frame = 1
Query: 250 MLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAMNGLGDWVAVCKMGMGVFGAAAATASAETVSMVLLGLAVWRAQG-ERVYKFVELPSA-EELKVFLDFAGPIAFALLGKVLCYSVMTITVTAIGPLPLATHNV 1032
+L+F +PTLGIWLA PIMSLVD VVG S ELA +GPAT LC+S IY TFLA+A TNL A ALADG A++Q VV+ AL +AL G++V + ++ G R+LA G ++P AL Y+ +R LGAP + MV Q++ LGA+DSVTPL V L A A+N + D V G+ GAAAAT AE V V+L A+ RAQG R Y F+ L S +++ F FAGP+ FAL GK LCY+ + I +G +PLA H V
Sbjct: 157 LLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPLKDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQV 419
BLAST of mRNA_Ecto-sp13_S_contig9703.21339.1 vs. uniprot
Match: A0A8J9WM82_9CHLO (Protein DETOXIFICATION 46, chloroplastic n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WM82_9CHLO) HSP 1 Score: 186 bits (473), Expect = 2.380e-50 Identity = 115/279 (41.22%), Postives = 168/279 (60.22%), Query Frame = 1
Query: 226 DSNVSYTRMLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAMNGLGDWVAVCKMGMGVFGAAAATASAE--TVSMVLLGLAVWRAQ-----GERVYKFVELPSAEELKVFLDFAGPIAFALLGKVLCYSVMTITVTAIGPLPLATHNVSRE 1041
++++ +L+F LPTLGIW+ +P++SLVD VVGTRSA ELA+LGP T+LC+ Y TFLA A TN+ A + A +A+A +++ AL ++L +G+ +A+ + + P L ++AG+ S VV A+ Y RVR LG PA++ V QA L A D +TPL +A N LGD + VC G G+ GAA ATA A+ T +L GL A+ G R LPS + + F+ +AGPIA L+ KV+ Y VMT + +GP+ + H+V +
Sbjct: 155 EASLGAWELLRFTLPTLGIWIINPVLSLVDTSVVGTRSARELAALGPGTMLCDGNAYIFTFLAAATTNMLAISFARRDKAQASGILSDALFISLGLGVALAIAMYFYAPPALQRIAGQASAAVVEPAVTYVRVRCLGLPAALVIFVAQAFFLAAMDPMTPLLAATLAGVANLLGDILLVCGFGWGIAGAALATAVAQIMTAGALLWGLYRPLAKRSLFPGWRADVRWRLPSLQSVINFVAYAGPIAGVLITKVIIYGVMTTVASYLGPVTVGAHHVVQS 433
BLAST of mRNA_Ecto-sp13_S_contig9703.21339.1 vs. uniprot
Match: A0A0M0J4L8_9EUKA (Enhanced disease susceptibility (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J4L8_9EUKA) HSP 1 Score: 178 bits (452), Expect = 9.220e-48 Identity = 121/282 (42.91%), Postives = 166/282 (58.87%), Query Frame = 1
Query: 250 MLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAMNGLGDWVAVCKMGMGVFGAAAATASAETVSMVLLGLAVWR---------------------AQGERVYKFVELPSAEELKVFLDFAGPIAFALLGKVLCYSVMTITVTAIGPLPLATHNV 1032
+++FI+PTL L+S +MS+VD VVG+ SATELA+LGPAT+L +S Y +L +A T+L ATALA G + EA ++ AL +AL GL V+V + GP L QL + EVVPAA Y R+R+ G PA + +VLQAACLGA+DS++PL V+L+ A+N D V V GMG+ GAA AT +A+ + LL V R +QG + PS ++ FL FAGP+A L+GK+ CY+ MT+ + G LA H V
Sbjct: 72 LIRFIVPTLAALLSSEVMSVVDTAVVGSCSATELAALGPATMLVDSSAYLFFWLNVATTSLFATALAAGDQNEAFSTLSDALYVALLCGLGVSVFIACLGPATL-QLICASALEVVPAATRYLRIRMFGYPAFLVGLVLQAACLGAKDSLSPLLVLLVCGALNLGLDLVLVRSCGMGIGGAAIATLAAQLLQTALLAYVVQRXXXXXXXXXXXVATSASPVLASQGPQWLLLRGRPSLPRIRTFLAFAGPMALVLMGKIACYNSMTLAAST-GVASLAAHQV 351
BLAST of mRNA_Ecto-sp13_S_contig9703.21339.1 vs. uniprot
Match: A0A2I4GBR8_JUGRE (Protein DETOXIFICATION n=9 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4GBR8_JUGRE) HSP 1 Score: 164 bits (415), Expect = 2.010e-42 Identity = 108/300 (36.00%), Postives = 168/300 (56.00%), Query Frame = 1
Query: 139 AVSIDEVEVEEDSKGVAATIEGGWGEQKDDSNVSYTRMLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAMNGLGDWVAVCKMGMGVFGAAAATASAETVSMVLLGLAVWRAQGERVYKF--VELPSAEELKVFLDFAGPIAFALLGKVLCYSVMTITVTAIGPLPLATHNV 1032
+VS +EVE D G + + W + K+ ++KF P G+W+ P+MSL+D V+G S+ ELA+LGPATV+C+SL Y FL+IA +N+ AT+LA + E Q ++ L + L+ G ++ + + FG L G KS V+PAA Y ++R L PA + V Q+A LG +DS PL + +ASA+N +GD V +G G+ GAA ATA+ S V+ G + + ++ Y + +PS EEL+ A P+ ++ KV +S++T T++G +A H V
Sbjct: 81 SVSEQVLEVEGDGAG-SGDRQTIWHQMKE--------IVKFTGPATGLWICGPLMSLIDTAVIGQGSSIELAALGPATVMCDSLSYVFMFLSIATSNMVATSLAKKDKNEVQHHISNLLFVGLTCGCLMLLFTKFFGSWALTAFTGPKSAHVIPAANTYVQIRGLAWPAVLIGWVTQSASLGMKDSWGPLKALAVASAVNAVGDIVLCSFLGYGIAGAAWATAA----SQVIAGYMMIESLNKKGYDAFAISVPSLEELRTVFGLAAPVFVTMISKVAFFSLITYLATSMGTYSMAAHQV 367
BLAST of mRNA_Ecto-sp13_S_contig9703.21339.1 vs. uniprot
Match: A0A834ZN39_9MAGN (Protein DETOXIFICATION n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834ZN39_9MAGN) HSP 1 Score: 161 bits (408), Expect = 7.550e-42 Identity = 102/299 (34.11%), Postives = 168/299 (56.19%), Query Frame = 1
Query: 136 SAVSIDEVEVEEDSKGVAATIEGGWGEQKDDSNVSYTRMLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAMNGLGDWVAVCKMGMGVFGAAAATASAETVSMVLLGLAVWRAQGERVYKFVELPSAEELKVFLDFAGPIAFALLGKVLCYSVMTITVTAIGPLPLATHNV 1032
S+V + +EV + G E W + K+ + F P G+W+ P+MSL+D V+G S+ ELA+LGPATV+C+ L Y FL+I+ +N+ AT+LA + E Q ++ L + + G+ + + GP +LA G K+ +VP A Y ++R L PA + MV Q+A LG +DS PL +++ASA+NG+GD V C +G G+ GAA AT ++ ++ ++ ++ R +G + + +PS EL + A P+ ++ KV YS++T T++G + +A H V
Sbjct: 87 SSVGEEAMEVIQSVTGDFRENESIWKQMKE--------IAIFAAPATGLWICGPLMSLIDTAVIGLGSSVELAALGPATVVCDYLSYVFMFLSISTSNMVATSLAREDKNEVQHQISVLLFVGFTCGIGMFFFTKFLGPWILAAFTGPKNLHLVPPASTYVQIRGLAWPALLVGMVAQSASLGMKDSFGPLKALVVASAVNGVGDIVLCCFLGYGIAGAAWATMVSQVIAAFMMIESLNR-KGFNAFS-ISVPSPSELLQIFELAAPVFVTMISKVAFYSLLTYFATSMGTITIAGHQV 375
BLAST of mRNA_Ecto-sp13_S_contig9703.21339.1 vs. uniprot
Match: A0A5N5IK89_9ROSA (Protein DETOXIFICATION n=3 Tax=Maleae TaxID=721813 RepID=A0A5N5IK89_9ROSA) HSP 1 Score: 160 bits (405), Expect = 4.810e-41 Identity = 100/261 (38.31%), Postives = 153/261 (58.62%), Query Frame = 1
Query: 259 FILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAMNGLGDWVAVCKMGMGVFGAAAATASAETVSMVLLGLAVWRA---QGERVYKFVELPSAEELKVFLDFAGPIAFALLGKVLCYSVMTITVTAIGPLPLATHNV 1032
F P G+WL P+MSL+D V+G S+ ELA+LGPATV+C+SL Y FL++A +N+ ATALA G R EAQ ++ L + L+ G + + + FG L +G K+ ++PAA Y ++R L PA + ++ Q+A LG +DS PL + +ASA+NG+GD V + G+ GAA AT VS V+ G + +A +G Y F +PS +EL + + A P+ ++ KV Y+++ T++G +A H V
Sbjct: 105 FTGPATGLWLCGPLMSLIDTVVIGQGSSIELAALGPATVMCDSLSYVFMFLSVATSNMVATALAKGDRNEAQHHISILLFIGLTCGFAMLIFTRFFGSWALTAFSGPKNAHLIPAANTYVQIRGLAWPAVLIGLITQSASLGMKDSWGPLKALAVASAINGIGDVVLCSFLRYGIAGAAWAT----MVSQVVAGYMMIQALNNKGYNAYAF-SVPSPKELLIVFELAAPVVLTMMSKVAFYTLIVYFATSMGTNIIAAHQV 360
BLAST of mRNA_Ecto-sp13_S_contig9703.21339.1 vs. uniprot
Match: V4RQF3_CITCL (Uncharacterized protein n=1 Tax=Citrus clementina TaxID=85681 RepID=V4RQF3_CITCL) HSP 1 Score: 157 bits (398), Expect = 5.570e-41 Identity = 102/306 (33.33%), Postives = 169/306 (55.23%), Query Frame = 1
Query: 136 SAVSIDEVEVEEDSKGVAATIEGG-----WGEQKDDSNVSYTRMLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRVRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAMNGLGDWVAVCKMGMGVFGAAAATASAETVS--MVLLGLAVWRAQGERVYKFVELPSAEELKVFLDFAGPIAFALLGKVLCYSVMTITVTAIGPLPLATHNV 1032
S S+ E +E+ K V EG W + K+ ++KF P G+W+ P+MSL+D V+G S+ ELA+LGP TVLC+++ Y FL+IA +NL AT+L + E Q ++ L + L+ G + + + FG + L G K+ ++PAA Y ++R L PA + V Q+A LG +DS PL +++ASA+NG+GD V +G G+ GAA AT +++ ++ M+++ L +G + + +P EL + A P+ ++ KV ++++T T++G + LA H V
Sbjct: 79 SNTSVSLSEEKEEEKAVEVKTEGLADQSIWNQIKE--------IMKFTGPATGLWICGPLMSLIDTAVIGQGSSLELAALGPGTVLCDNMSYIFMFLSIATSNLVATSLTKQDKNEVQHQISVLLFVGLACGFSMLIFTKFFGMQALFAFTGSKNVHILPAANKYVQIRGLAWPAVLTGWVAQSASLGMKDSWGPLKALVVASAVNGIGDIVLCRFLGYGIAGAAWATMASQVIAAYMMIINL---NQKGYNAFA-ISIPLPNELLAIFELAAPVFVMMMSKVAFFTLLTYFATSMGTITLAAHQV 372 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9703.21339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9703.21339.1 >prot_Ecto-sp13_S_contig9703.21339.1 ID=prot_Ecto-sp13_S_contig9703.21339.1|Name=mRNA_Ecto-sp13_S_contig9703.21339.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=349bp GALGSTPVSSARVGERLRVRCTRGIHARGGGARHGRDGIRRPWRRSAVSIback to top mRNA from alignment at Ecto-sp13_S_contig9703:389..3792- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9703.21339.1 ID=mRNA_Ecto-sp13_S_contig9703.21339.1|Name=mRNA_Ecto-sp13_S_contig9703.21339.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3404bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9703:389..3792- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9703:389..3792- >mRNA_Ecto-sp13_S_contig9703.21339.1 ID=mRNA_Ecto-sp13_S_contig9703.21339.1|Name=mRNA_Ecto-sp13_S_contig9703.21339.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1047bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9703:389..3792- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |