prot_Ecto-sp13_S_contig96708.21302.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig96708.21302.1
Unique Nameprot_Ecto-sp13_S_contig96708.21302.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length53
Homology
BLAST of mRNA_Ecto-sp13_S_contig96708.21302.1 vs. uniprot
Match: D8LRY6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY6_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 1.990e-26
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
Query:    1 VLQPTYAPSTEYAFKGDWLGTYVSEVMLFVGSLSLFSIFILMAIFWADLLKGV 53
            VLQPTYAPSTEYAFKGDWLGTYVSEVMLFVGSLSLFSIFILMAIFWADLLKG+
Sbjct:   68 VLQPTYAPSTEYAFKGDWLGTYVSEVMLFVGSLSLFSIFILMAIFWADLLKGI 120          
BLAST of mRNA_Ecto-sp13_S_contig96708.21302.1 vs. uniprot
Match: A0A835ZB76_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB76_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.020e-12
Identity = 31/51 (60.78%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 VLQPTYAPSTEYAFKGDWLGTYVSEVMLFVGSLSLFSIFILMAIFWADLLK 51
            VL  +YAP   YAF G+WLG ++SEV+L  GS+SLFSIFIL AI+W++L+K
Sbjct:   67 VLNSSYAPRDVYAFHGEWLGAFISEVLLTAGSISLFSIFILFAIYWSNLVK 117          
BLAST of mRNA_Ecto-sp13_S_contig96708.21302.1 vs. uniprot
Match: W7UBN7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBN7_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.550e-9
Identity = 30/54 (55.56%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    1 VLQPTYAPSTEYAFKGD-WLGTYVSEVMLFVGSLSLFSIFILMAIFWADLLKGV 53
            VL+P+YAP+  +AF+   W GT VSE++L  G+L LF+IF+L+ I+WADLLK V
Sbjct:   66 VLEPSYAPAEVWAFQTPHWAGTLVSEILLSGGTLCLFAIFVLIIIYWADLLKKV 119          
BLAST of mRNA_Ecto-sp13_S_contig96708.21302.1 vs. uniprot
Match: A0A4D9DA28_9STRA (U1-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA28_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.650e-9
Identity = 30/54 (55.56%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    1 VLQPTYAPSTEYAFKGD-WLGTYVSEVMLFVGSLSLFSIFILMAIFWADLLKGV 53
            VL+P+YAP+  +AF+   W GT VSE++L  G+L LF+IF+L+ I+WADLLK V
Sbjct:  378 VLEPSYAPAEVWAFQTPHWAGTLVSEILLSGGTLCLFAIFVLIIIYWADLLKKV 431          
BLAST of mRNA_Ecto-sp13_S_contig96708.21302.1 vs. uniprot
Match: A0A1Z5K3Q9_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3Q9_FISSO)

HSP 1 Score: 59.3 bits (142), Expect = 5.910e-9
Identity = 28/54 (51.85%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    1 VLQPTYAPSTEYAFKGD---WLGTYVSEVMLFVGSLSLFSIFILMAIFWADLLK 51
            V QP+Y PS  YA+  +   WLG+ +SE+++  GSL+LFSIFIL+ ++WAD+LK
Sbjct:   90 VWQPSYTPSAVYAWDNEHPSWLGSALSEIIITAGSLALFSIFILILVYWADILK 143          
BLAST of mRNA_Ecto-sp13_S_contig96708.21302.1 vs. uniprot
Match: A0A7S1ZLR8_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZLR8_TRICV)

HSP 1 Score: 56.2 bits (134), Expect = 7.500e-8
Identity = 26/54 (48.15%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    1 VLQPTYAPSTEYAFKGD---WLGTYVSEVMLFVGSLSLFSIFILMAIFWADLLK 51
            V  P+Y P    AF  +   W+G ++SE++L +GSL LFSIFIL+ ++WAD+LK
Sbjct:  118 VFMPSYVPVAYMAFDDEHPSWVGAFISEILLSLGSLCLFSIFILILVYWADILK 171          
BLAST of mRNA_Ecto-sp13_S_contig96708.21302.1 vs. uniprot
Match: A0A7S2R9F3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R9F3_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.380e-7
Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 VLQPTYAPSTEYAFKGD---WLGTYVSEVMLFVGSLSLFSIFILMAIFWADLLK 51
            + +P+Y P    AF  +   W+G +V E++L  GSL LFSIFIL+ ++WAD+LK
Sbjct:   85 LTEPSYVPRAVMAFNSEDPSWIGAFVDEILLSAGSLCLFSIFILILVYWADILK 138          
BLAST of mRNA_Ecto-sp13_S_contig96708.21302.1 vs. uniprot
Match: A0A7S2HB75_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HB75_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 3.640e-7
Identity = 26/54 (48.15%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    1 VLQPTYAPSTEYAFK---GDWLGTYVSEVMLFVGSLSLFSIFILMAIFWADLLK 51
            VL+ +Y P    AF     +W G ++SE++L  GS+SLFSIFIL+ ++WAD+LK
Sbjct:  103 VLEVSYTPYAVMAFDENHSNWSGAFISEIILSAGSISLFSIFILILVYWADILK 156          
BLAST of mRNA_Ecto-sp13_S_contig96708.21302.1 vs. uniprot
Match: A0A7R9VQ88_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VQ88_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.270e-6
Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    1 VLQPTYAPSTEYAFKGD--WLGTYVSEVMLFVGSLSLFSIFILMAIFWADLLK 51
            V  P+Y P    AF  +  W+G ++SE+++  GSL LFSIFIL+ ++WAD+LK
Sbjct:   99 VFFPSYVPVAYMAFDPNVPWVGAFISELLISAGSLCLFSIFILILVYWADILK 151          
BLAST of mRNA_Ecto-sp13_S_contig96708.21302.1 vs. uniprot
Match: A0A7S1D2M5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D2M5_CYCTE)

HSP 1 Score: 52.8 bits (125), Expect = 1.280e-6
Identity = 24/54 (44.44%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    1 VLQPTYAPSTEYAFKG---DWLGTYVSEVMLFVGSLSLFSIFILMAIFWADLLK 51
            V QP+Y P+   AF      W+G + SE+++  GSL LF+IF+L+ ++WAD+LK
Sbjct:  101 VWQPSYTPTAVMAFSSTYKSWVGLFFSELIMTAGSLCLFAIFVLILVYWADILK 154          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig96708.21302.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LRY6_ECTSI1.990e-2698.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZB76_9STRA4.020e-1260.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7UBN7_9STRA4.550e-955.56Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9DA28_9STRA4.650e-955.56U1-type domain-containing protein n=1 Tax=Nannochl... [more]
A0A1Z5K3Q9_FISSO5.910e-951.85Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1ZLR8_TRICV7.500e-848.15Hypothetical protein (Fragment) n=2 Tax=Trieres ch... [more]
A0A7S2R9F3_9STRA1.380e-746.30Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2HB75_9STRA3.640e-748.15Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7R9VQ88_9STRA1.270e-647.17Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1D2M5_CYCTE1.280e-644.44Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..53
NoneNo IPR availableTMHMMTMhelixcoord: 25..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig96708contigEcto-sp13_S_contig96708:52..210 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig96708.21302.1mRNA_Ecto-sp13_S_contig96708.21302.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig96708 52..210 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig96708.21302.1 ID=prot_Ecto-sp13_S_contig96708.21302.1|Name=mRNA_Ecto-sp13_S_contig96708.21302.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=53bp
VLQPTYAPSTEYAFKGDWLGTYVSEVMLFVGSLSLFSIFILMAIFWADLL
KGV
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