prot_Ecto-sp13_S_contig962.21243.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig962.21243.1
Unique Nameprot_Ecto-sp13_S_contig962.21243.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length201
Homology
BLAST of mRNA_Ecto-sp13_S_contig962.21243.1 vs. uniprot
Match: A0A6H5JSQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSQ9_9PHAE)

HSP 1 Score: 391 bits (1005), Expect = 3.200e-130
Identity = 186/199 (93.47%), Postives = 193/199 (96.98%), Query Frame = 0
Query:    1 MSFIDVDEFIDPAPGLPLKRKMDSVEGSLSQMDAHRFEFVDGYMSARRKRLRHLLERSIPRRHTHCMAWVNYCSRGQVSKPPGGIIENYHELEDMGEAKIHMQKPLFRALESLTLRKIGPHFLLYATEDVVLQYRRNLSCPYEWLDPDAFRIRHYRSKSLEEYVQRRAGADSAYRNKRYTKERLALEWQEINAKCGNGR 199
            MSFIDVDEFIDPAPGLPL+RKMDSVEG+L Q+DAHRFEFVDGYMSARRKRLRHLLE+SIPRRHTHCMAWVNYCSRGQVSKPPGGIIENYHE+EDMGE KIHMQKPLFRALESLTLRKIGPHFLLYATEDV LQYRRNLSCPYEWLDPDAFRIRHYRSKSLEEYVQRR GADSAYRNKRYTKE+LALEWQE NA+CGN R
Sbjct:  528 MSFIDVDEFIDPAPGLPLRRKMDSVEGNLRQLDAHRFEFVDGYMSARRKRLRHLLEQSIPRRHTHCMAWVNYCSRGQVSKPPGGIIENYHEIEDMGEPKIHMQKPLFRALESLTLRKIGPHFLLYATEDVTLQYRRNLSCPYEWLDPDAFRIRHYRSKSLEEYVQRRTGADSAYRNKRYTKEQLALEWQETNAQCGNDR 726          
BLAST of mRNA_Ecto-sp13_S_contig962.21243.1 vs. uniprot
Match: D7G5V6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V6_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 4.990e-54
Identity = 87/93 (93.55%), Postives = 89/93 (95.70%), Query Frame = 0
Query:  108 RALESLTLRKIGPHFLLYATEDVVLQYRRNLSCPYEWLDPDAFRIRHYRSKSLEEYVQRRAGADSAYRNKRYTKERLALEWQEINAKCGNGRV 200
            +ALESLTLRKIGPHFLL ATEDVVLQYRRNLSCPYEWLDPDAFRIRHYRSKSLEEYV RR GADSAYRNKRYTKERLALEWQE NA+CGNGRV
Sbjct:  167 KALESLTLRKIGPHFLLSATEDVVLQYRRNLSCPYEWLDPDAFRIRHYRSKSLEEYVHRRTGADSAYRNKRYTKERLALEWQETNAQCGNGRV 259          
BLAST of mRNA_Ecto-sp13_S_contig962.21243.1 vs. uniprot
Match: A0A835Z8H1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H1_9STRA)

HSP 1 Score: 162 bits (411), Expect = 9.520e-43
Identity = 88/202 (43.56%), Postives = 114/202 (56.44%), Query Frame = 0
Query:    1 MSFIDVDEFIDPAPGLPLKRKMDSVEGSLSQMDAHRFEFVDGYMSARRKRLRHLLERSIPRR--HTHCMAWVNYCSRGQVSKPP--GGIIENYHELEDMGEA---KIHMQKPLFRALESLTLRKIGPHFLLYATEDVVLQYRRNLSCPYEWLDPDAFRIRHYRSKSLEEYVQRRAGADSAYRNKRYTKERLALEWQEINAKC 195
            M+FIDVDEFIDPAP  P+     + +                        L  +LE + P R    HCM WV YC+RGQ+  P    G++ +Y ++  +  A   +IHMQKP+FRA  +L LR IGPHFLLYAT D   Q R NL CP+ W DP   R+RHYR++S  E+V RR GAD+AY+ + Y    L  EW E NA+C
Sbjct:  814 MTFIDVDEFIDPAPARPIAEPRHAED------------------------LLPILEPNGPDRGADVHCMPWVAYCARGQLEPPADGAGVLASYPDVAPVPAAVKQRIHMQKPIFRAAAALALRAIGPHFLLYATSDPAAQCRVNLKCPHPWEDPSVLRLRHYRARSRAEFVARRRGADAAYKGRHYNDAELRAEWDEENARC 991          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig962.21243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JSQ9_9PHAE3.200e-13093.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5V6_ECTSI4.990e-5493.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z8H1_9STRA9.520e-4343.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig962contigEcto-sp13_S_contig962:3821..6553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig962.21243.1mRNA_Ecto-sp13_S_contig962.21243.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig962 3591..7155 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig962.21243.1 ID=prot_Ecto-sp13_S_contig962.21243.1|Name=mRNA_Ecto-sp13_S_contig962.21243.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=201bp
MSFIDVDEFIDPAPGLPLKRKMDSVEGSLSQMDAHRFEFVDGYMSARRKR
LRHLLERSIPRRHTHCMAWVNYCSRGQVSKPPGGIIENYHELEDMGEAKI
HMQKPLFRALESLTLRKIGPHFLLYATEDVVLQYRRNLSCPYEWLDPDAF
RIRHYRSKSLEEYVQRRAGADSAYRNKRYTKERLALEWQEINAKCGNGRV
*
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