prot_Ecto-sp13_S_contig12560.2120.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12560.2120.1
Unique Nameprot_Ecto-sp13_S_contig12560.2120.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length524
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12560.2120.1 vs. uniprot
Match: D8LKY8_ECTSI (Pleckstrin homology (PH) domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKY8_ECTSI)

HSP 1 Score: 666 bits (1718), Expect = 7.930e-228
Identity = 405/524 (77.29%), Postives = 413/524 (78.82%), Query Frame = 0 
Query:    1 QQEFGGASFVTASRLFVREGDLFKVARNGVEKLHFVLFNDLLVYGQAKRRRSLLRRGSSREQLYHHRRDIHLSKCFIVDAPSYGSRCSSFLGETGLLVISEEKTFMVMASTAVEKDGWLQAIRLCMRELSTSNSVVARERGDGSSRNQVLDDARAQRRRRQHAKCSPPGSSSSSPQSWSVASHSPMAASAPRSVWVPGKNGSHKTSSLRLVEFCLPQWAGVRTSCGCLSHTELTWGKDSLAARGQDQGLGGVAGVMSGVGLSPNGGDWRNVGVGAAPYSDLQQSGGTPQPRSGTTSPRKASQPNIVALVISMRPSEPMGLRLRDVHPECGGGVVVIGFERSAAGKRAGVLQGDRITEVNGIYVSRTNDIVWALQQQXXXXQHPGISGLRFSGSGGNRRQVNLTVLRGFPDSEKPWLPRLTLEPSPTATVLTPPSSAVESPASGEDDDDASVPSPVLSAPGRKTFSGRGTSGNNTLGFAGFYSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPRVPEDITV 524
            QQEFGGASFVTASRLFVREGDLFKVARNGVEKLHFVLFNDLLVYGQAKRRR LLRRGSSREQLYHHRRD++LS CFIVDAPSYGSRCSSFLGETG+LVISEEKTFMVMASTAVEKDGWLQAIRLCMRELSTSNSVVARERG GSSRNQV+DDARAQR                SPQSWSVASHSPMAASAPRSVWVPGKNGSHKTSSLRLVEFCLP WAGVRTSCGCLSHTELTWGKDSLAA GQDQGLGGVAG MSGVG SPNGGD RNVGVGAAPYSDL+QSGGTPQPRSGTTSPRK      VALVISMRPSEPMGLRLRDVHPECGGGVVVIGFERSAAGKRAGVLQGDRITEVN                                                                              ESPASGEDD+DASVPSPVLSAPGRKTFSGRGTSGNNTLGFAGFYSGXXXXXXXXXXXXXXXXXXXXXXXXXXX   TTPRVP++ITV
Sbjct:  283 QQEFGGASFVTASRLFVREGDLFKVARNGVEKLHFVLFNDLLVYGQAKRRRPLLRRGSSREQLYHHRRDMNLSNCFIVDAPSYGSRCSSFLGETGMLVISEEKTFMVMASTAVEKDGWLQAIRLCMRELSTSNSVVARERGYGSSRNQVVDDARAQRXXXXXXXXXXXXXXXXSPQSWSVASHSPMAASAPRSVWVPGKNGSHKTSSLRLVEFCLPPWAGVRTSCGCLSHTELTWGKDSLAAGGQDQGLGGVAGGMSGVGWSPNGGDSRNVGVGAAPYSDLRQSGGTPQPRSGTTSPRK------VALVISMRPSEPMGLRLRDVHPECGGGVVVIGFERSAAGKRAGVLQGDRITEVN------------------------------------------------------------------------------ESPASGEDDEDASVPSPVLSAPGRKTFSGRGTSGNNTLGFAGFYSGXXXXXXXXXXXXXXXXXXXXXXXXXXX---TTPRVPDNITV 719
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12560.2120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKY8_ECTSI7.930e-22877.29Pleckstrin homology (PH) domain-containing protein... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 16..129
e-value: 1.1E-10
score: 51.5
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 17..127
e-value: 1.3E-5
score: 25.6
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 15..127
score: 10.169
NoneNo IPR availableGENE3D2.30.42.10coord: 312..421
e-value: 1.5E-6
score: 29.9
NoneNo IPR availablePANTHERPTHR12673FACIOGENITAL DYSPLASIA PROTEINcoord: 8..173
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 7..130
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 2..166
e-value: 7.1E-21
score: 76.5
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 302..376

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12560contigEcto-sp13_S_contig12560:3..5009 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12560.2120.1mRNA_Ecto-sp13_S_contig12560.2120.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12560 3..5009 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12560.2120.1 ID=prot_Ecto-sp13_S_contig12560.2120.1|Name=mRNA_Ecto-sp13_S_contig12560.2120.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=524bp
QQEFGGASFVTASRLFVREGDLFKVARNGVEKLHFVLFNDLLVYGQAKRR
RSLLRRGSSREQLYHHRRDIHLSKCFIVDAPSYGSRCSSFLGETGLLVIS
EEKTFMVMASTAVEKDGWLQAIRLCMRELSTSNSVVARERGDGSSRNQVL
DDARAQRRRRQHAKCSPPGSSSSSPQSWSVASHSPMAASAPRSVWVPGKN
GSHKTSSLRLVEFCLPQWAGVRTSCGCLSHTELTWGKDSLAARGQDQGLG
GVAGVMSGVGLSPNGGDWRNVGVGAAPYSDLQQSGGTPQPRSGTTSPRKA
SQPNIVALVISMRPSEPMGLRLRDVHPECGGGVVVIGFERSAAGKRAGVL
QGDRITEVNGIYVSRTNDIVWALQQQQQQQQHPGISGLRFSGSGGNRRQV
NLTVLRGFPDSEKPWLPRLTLEPSPTATVLTPPSSAVESPASGEDDDDAS
VPSPVLSAPGRKTFSGRGTSGNNTLGFAGFYSGGGGGGGGNSAATAVNYS
PEEPPPSAATASSTTPRVPEDITV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf
IPR036034PDZ_sf