prot_Ecto-sp13_S_contig12557.2118.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12557.2118.1
Unique Nameprot_Ecto-sp13_S_contig12557.2118.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length58
Homology
BLAST of mRNA_Ecto-sp13_S_contig12557.2118.1 vs. uniprot
Match: A0A6H5K9X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9X3_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 4.290e-28
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
Query:    3 VRLDELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLERKV 54
            VRLDELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLERKV
Sbjct:  140 VRLDELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLERKV 191          
BLAST of mRNA_Ecto-sp13_S_contig12557.2118.1 vs. uniprot
Match: D8LC82_ECTSI (Haloacid dehalogenase (HAD) superfamily protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC82_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 1.890e-27
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
Query:    3 VRLDELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLERKV 54
            VRLDELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLERKV
Sbjct:  213 VRLDELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLERKV 264          
BLAST of mRNA_Ecto-sp13_S_contig12557.2118.1 vs. uniprot
Match: A0A835Z207_9STRA (Mitochondrial PGP phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z207_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.040e-16
Identity = 35/48 (72.92%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    7 ELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLERKV 54
            +LC +GDRLLTDVVFGNLHGMLTVHT+PLTL+GDN+ A V RY+E ++
Sbjct:  147 DLCVIGDRLLTDVVFGNLHGMLTVHTKPLTLQGDNKVALVARYIESRI 194          
BLAST of mRNA_Ecto-sp13_S_contig12557.2118.1 vs. uniprot
Match: A0A7S1ISK9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1ISK9_9EUGL)

HSP 1 Score: 74.7 bits (182), Expect = 8.040e-15
Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = 0
Query:    3 VRLDELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLERKV 54
            VR  EL  VGDRLLTDVVFGNL+GMLTVHT+PLTL+GDN+ A V R LE  V
Sbjct:  172 VRPTELVMVGDRLLTDVVFGNLYGMLTVHTRPLTLEGDNKVARVIRPLETAV 223          
BLAST of mRNA_Ecto-sp13_S_contig12557.2118.1 vs. uniprot
Match: A0A0L0G5Q0_9EUKA (HAD superfamily (Subfamily IIIA) phosphatase n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5Q0_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 1.700e-14
Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 RQVRLDELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLE 51
            + V+L+EL FVGDRLLTDVVFGNL GMLT+HTQP +LK DNR A   R +E
Sbjct:  135 KDVKLEELAFVGDRLLTDVVFGNLGGMLTIHTQPFSLKRDNRVAKSVRTME 185          
BLAST of mRNA_Ecto-sp13_S_contig12557.2118.1 vs. uniprot
Match: A0A4D9CSW1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSW1_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.160e-12
Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    6 DELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLERKVSRTI 58
            ++LC +GDRLLTDV++GN  GMLTVHTQ LT +GDN+ AA+ R LE   SR +
Sbjct:  101 EDLCIIGDRLLTDVMWGNFAGMLTVHTQILTPEGDNKVAAIVRRLENGFSRIL 153          
BLAST of mRNA_Ecto-sp13_S_contig12557.2118.1 vs. uniprot
Match: W7U306_9STRA (Haloacid dehalogenase superfamily protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U306_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.930e-12
Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    6 DELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLERKVSRTI 58
            ++LC +GDRLLTDV++GN  GMLTVHTQ LT +GDN+ AA+ R LE   SR +
Sbjct:  220 EDLCIIGDRLLTDVMWGNFAGMLTVHTQILTPEGDNKVAAIVRRLENGFSRIL 272          
BLAST of mRNA_Ecto-sp13_S_contig12557.2118.1 vs. uniprot
Match: R1BPW3_EMIHU (Uncharacterized protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BPW3_EMIHU)

HSP 1 Score: 64.7 bits (156), Expect = 1.260e-11
Identity = 31/44 (70.45%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    8 LCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLE 51
            L  VGDR LTDVVFGN+HGMLTVHTQ LT +GDNR A   R  E
Sbjct:   99 LLMVGDRYLTDVVFGNMHGMLTVHTQQLTTEGDNRVAQAMRRAE 142          
BLAST of mRNA_Ecto-sp13_S_contig12557.2118.1 vs. uniprot
Match: A0A448ZEQ0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZEQ0_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.060e-11
Identity = 31/50 (62.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    8 LCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNR----PAAVFRYLERK 53
            LC VGDRLLTDVVFGNLH MLT+HT PL    +NR    P+ + RY+E K
Sbjct:  140 LCMVGDRLLTDVVFGNLHSMLTIHTLPLCKGAENRQDNTPSKIIRYIENK 189          
BLAST of mRNA_Ecto-sp13_S_contig12557.2118.1 vs. uniprot
Match: R1CM78_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CM78_EMIHU)

HSP 1 Score: 64.7 bits (156), Expect = 3.340e-11
Identity = 31/44 (70.45%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    8 LCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYLE 51
            L  VGDR LTDVVFGN+HGMLTVHTQ LT +GDNR A   R  E
Sbjct:  139 LLMVGDRYLTDVVFGNMHGMLTVHTQQLTTEGDNRVAQAMRRAE 182          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12557.2118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9X3_9PHAE4.290e-28100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LC82_ECTSI1.890e-27100.00Haloacid dehalogenase (HAD) superfamily protein n=... [more]
A0A835Z207_9STRA1.040e-1672.92Mitochondrial PGP phosphatase-domain-containing pr... [more]
A0A7S1ISK9_9EUGL8.040e-1573.08Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A0L0G5Q0_9EUKA1.700e-1468.63HAD superfamily (Subfamily IIIA) phosphatase n=1 T... [more]
A0A4D9CSW1_9STRA1.160e-1260.38Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U306_9STRA4.930e-1260.38Haloacid dehalogenase superfamily protein n=1 Tax=... [more]
R1BPW3_EMIHU1.260e-1170.45Uncharacterized protein (Fragment) n=2 Tax=Emilian... [more]
A0A448ZEQ0_9STRA3.060e-1162.00Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
R1CM78_EMIHU3.340e-1170.45Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13242Hydrolase_likecoord: 5..31
e-value: 9.2E-5
score: 22.4
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 4..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12557contigEcto-sp13_S_contig12557:4781..4954 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12557.2118.1mRNA_Ecto-sp13_S_contig12557.2118.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12557 4781..4954 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12557.2118.1 ID=prot_Ecto-sp13_S_contig12557.2118.1|Name=mRNA_Ecto-sp13_S_contig12557.2118.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=58bp
RQVRLDELCFVGDRLLTDVVFGNLHGMLTVHTQPLTLKGDNRPAAVFRYL
ERKVSRTI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036412HAD-like_sf