mRNA_Ecto-sp13_S_contig9550.21161.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: D8LS78_ECTSI (Phosphoglycerate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS78_ECTSI) HSP 1 Score: 511 bits (1315), Expect = 2.630e-180 Identity = 261/266 (98.12%), Postives = 264/266 (99.25%), Query Frame = 1
Query: 1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEEKTARPM 798
LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKEL YLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMD+AEAKGV+LLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVA+CLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEEKT RPM
Sbjct: 149 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELKYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDKAEAKGVELLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVASCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEEKTPRPM 414
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: D8LS77_ECTSI (Phosphoglycerate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS77_ECTSI) HSP 1 Score: 459 bits (1181), Expect = 5.700e-160 Identity = 231/263 (87.83%), Postives = 247/263 (93.92%), Query Frame = 1
Query: 1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEEKTA 789
LCDYYVNDAFGT HRAHAST GITKFV+RKVSG+LMEKEL YLKGAVD+PVRPMACIVGGAKVS KITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDD+V+LA LM +AEAKGVK+LLPEDVVVADKF+ AESD V DSIPEEWMGLDVGPKT S+FE+ALAPCKTIVWNGPMGVFEFDKFAAGTFAVA+CLADLTSKG ITIIGGGDS+AAVEKA LADKMSHISTGGGASL LLEGK+LPGV+AIEE+T+
Sbjct: 149 LCDYYVNDAFGTAHRAHASTEGITKFVDRKVSGMLMEKELKYLKGAVDSPVRPMACIVGGAKVSSKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDYVDLARDLMSKAEAKGVKMLLPEDVVVADKFSPTAESDTVTVDSIPEEWMGLDVGPKTISAFEDALAPCKTIVWNGPMGVFEFDKFAAGTFAVASCLADLTSKGAITIIGGGDSVAAVEKANLADKMSHISTGGGASLELLEGKELPGVNAIEERTS 411
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: A0A836CP82_9STRA (Phosphoglycerate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP82_9STRA) HSP 1 Score: 375 bits (964), Expect = 5.000e-127 Identity = 186/262 (70.99%), Postives = 221/262 (84.35%), Query Frame = 1
Query: 1 LCD-YYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEEK 783
LCD YVNDAFGT HRAHAST G+TKFV+ V G LMEKEL YLKGAVD PV+PM CI+GGAKVS KITVIEAL+EKCD+I+LGGGMIFTF+KA+G+ GKSLVED++VELA ++M A+ KGV++LLP DV++ADKF DAE+ V IP++WMGLDVGP + ++F+EAL+ CKTIVWNGPMGVFEF KFA GT +A LA+LT GV TIIGGGDS+AAVE+AGLA+KMSHISTGGGASL LLEGK LPGV+A+E+K
Sbjct: 149 LCDDIYVNDAFGTAHRAHASTEGVTKFVKHSVCGFLMEKELKYLKGAVDAPVKPMGCIIGGAKVSSKITVIEALLEKCDIIILGGGMIFTFFKAQGIPTGKSLVEDEYVELANKIMAAAKEKGVQVLLPTDVIIADKFDKDAEAKTVPVTDIPDDWMGLDVGPDSITTFKEALSTCKTIVWNGPMGVFEFPKFATGTLDIAKLLAELTETGVTTIIGGGDSVAAVEQAGLAEKMSHISTGGGASLELLEGKVLPGVAALEDK 410
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: UPI0019E3AD6E (Phosphoglycerate kinase n=1 Tax=Oscillatoriaceae cyanobacterium M7585_C2015_266 TaxID=2774341 RepID=UPI0019E3AD6E) HSP 1 Score: 364 bits (934), Expect = 1.280e-122 Identity = 178/258 (68.99%), Postives = 217/258 (84.11%), Query Frame = 1
Query: 7 DYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEE 780
D YVNDAFGT HRAHAST G+T++++ V+G L+EKEL YL+ A++NP RP+A IVGG+KVS KI VIEAL+EKCD +L+GGGMIFTFYKA+GL VGKSLVE+D +ELA L +A+ KGV+ LLP DVVVADKFAADA + V+ ++IP+ WMGLD+GP + F+EALA CKT++WNGPMGVFEFD+FA GT A+A LA+LT KGV TIIGGGDS+AAVEK GLADKMSHISTGGGASL LLEGK LPG++A++E
Sbjct: 142 DLYVNDAFGTAHRAHASTEGVTRYLKPSVAGFLIEKELQYLQAAIENPQRPLAAIVGGSKVSSKIGVIEALLEKCDKLLIGGGMIFTFYKARGLSVGKSLVEEDKLELARSLEAKAKEKGVQFLLPTDVVVADKFAADANAQTVSVENIPDGWMGLDIGPDSVKMFQEALADCKTVIWNGPMGVFEFDRFAVGTEAIARTLAELTPKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKVLPGIAALDE 399
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: PGKY_WHEAT (Phosphoglycerate kinase, cytosolic n=2 Tax=Triticum TaxID=4564 RepID=PGKY_WHEAT) HSP 1 Score: 363 bits (933), Expect = 1.870e-122 Identity = 185/260 (71.15%), Postives = 217/260 (83.46%), Query Frame = 1
Query: 1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEE 780
+ D YVNDAFGT HRAHAST G+TKF+ V+G LM+KEL YL GAV NP +P A IVGG+KVS KI VIE+L+ K D+++LGGGMIFTFYKA+GL VGKSLVE+D +ELA L++ A++KGVKLLLP DVVVADKFAADAES +V A +IP+ WMGLDVGP + +F EAL KT++WNGPMGVFEF+KFAAGT A+A LA+LT KGV TIIGGGDS+AAVEKAGLADKMSHISTGGGASL LLEGK LPGV A++E
Sbjct: 141 VADLYVNDAFGTAHRAHASTEGVTKFLRPSVAGFLMQKELDYLVGAVANPKKPFAAIVGGSKVSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGKSLVEEDKLELATSLIETAKSKGVKLLLPTDVVVADKFAADAESKIVPATAIPDGWMGLDVGPDSIKTFAEALDTTKTVIWNGPMGVFEFEKFAAGTDAIAKQLAELTGKGVTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKPLPGVLALDE 400
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: A0A2P2M3R2_RHIMU (Phosphoglycerate kinase n=3 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2M3R2_RHIMU) HSP 1 Score: 366 bits (940), Expect = 2.190e-122 Identity = 184/260 (70.77%), Postives = 215/260 (82.69%), Query Frame = 1
Query: 1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEE 780
L D YVNDAFGT HRAHAST G+TKF++ V+G L++KEL YL GAV NP RP A IVGG+KVS KI VIE+L+EKCD++LLGGGMIFTFYKA+GL VG SLVE+D ++LA L+++A+AKGV LLLP DVV+ADKFA DA S VV A +IPE WMGLD+GP +T +F EAL T++WNGPMGVFEFDKFA GT AVA LADL+ KGV TIIGGGDS+AAVEK G+AD MSHISTGGGASL LLEGK+LPGV A+EE
Sbjct: 217 LADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLDLATSLLEKAKAKGVSLLLPTDVVIADKFAPDANSKVVPASAIPEGWMGLDIGPDSTKTFNEALETTNTVIWNGPMGVFEFDKFAVGTEAVARKLADLSGKGVTTIIGGGDSVAAVEKVGVADAMSHISTGGGASLELLEGKELPGVLALEE 476
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: U5DBW2_AMBTC (Phosphoglycerate kinase n=1 Tax=Amborella trichopoda TaxID=13333 RepID=U5DBW2_AMBTC) HSP 1 Score: 363 bits (932), Expect = 2.650e-122 Identity = 183/260 (70.38%), Postives = 215/260 (82.69%), Query Frame = 1
Query: 1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEE 780
L D YVNDAFGT HRAHAST GI KF+ V+G LM+KEL YL GAV NP RP A IVGG+KVS KI VIE+L+EKCD++L+GGGMIFTFY+A+G VG SLVE+D ++LA L+++A+AKGV LLLP DVVVADKFA DAES VV A IPE WMGLD+GP + +F +AL P KTI+WNGPMGVFEF+KFAAGT A+A LA+L+ KGV TIIGGGDS+AAVE+AGLADKMSHISTGGGASL LLEGK LPGV A+++
Sbjct: 141 LADLYVNDAFGTAHRAHASTEGIAKFLRPAVAGFLMQKELDYLVGAVSNPKRPFAAIVGGSKVSTKIGVIESLLEKCDILLMGGGMIFTFYEAQGFSVGSSLVEEDKLDLATSLLEKAKAKGVALLLPTDVVVADKFAPDAESKVVPASEIPEGWMGLDIGPDSIKTFNDALEPAKTIIWNGPMGVFEFEKFAAGTKAIAKKLAELSEKGVTTIIGGGDSVAAVEQAGLADKMSHISTGGGASLELLEGKPLPGVLALDD 400
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: A0A2P7MSD2_9CYAN (Phosphoglycerate kinase n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A2P7MSD2_9CYAN) HSP 1 Score: 363 bits (932), Expect = 2.650e-122 Identity = 180/260 (69.23%), Postives = 215/260 (82.69%), Query Frame = 1
Query: 1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEE 780
L D YVNDAFG HRAHAST G+TK + V+G LMEKEL YL+GA+D P RP+A IVGG+KVS KI V+EALI+KCD +L+GGGMIFTFYKA+GL VGKSLVE+D +ELA L +A AKGV+LLLP DVV+AD FA DA S V+ D+IP+ WMGLD+GP + +F+EALA CKT++WNGPMGVFEFDKFAAGT +A+ LADL+ KG TIIGGGDS+AAVEK G+A+KMSHISTGGGASL LLEGK LPGV+A++E
Sbjct: 141 LADVYVNDAFGAAHRAHASTEGVTKALSPSVAGYLMEKELQYLQGAIDEPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLAVGKSLVEEDKLELAKELEAKAAAKGVQLLLPTDVVLADNFAPDANSQTVSIDAIPDGWMGLDIGPDSLKAFQEALADCKTVIWNGPMGVFEFDKFAAGTNGIAHTLADLSGKGCCTIIGGGDSVAAVEKVGVAEKMSHISTGGGASLELLEGKVLPGVAALDE 400
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: A0A3B6QEZ5_WHEAT (Phosphoglycerate kinase n=9 Tax=cellular organisms TaxID=131567 RepID=A0A3B6QEZ5_WHEAT) HSP 1 Score: 363 bits (931), Expect = 3.760e-122 Identity = 185/260 (71.15%), Postives = 217/260 (83.46%), Query Frame = 1
Query: 1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEE 780
+ D YVNDAFGT HRAHAST G+TKF+ V+G LM+KEL YL GAV NP +P A IVGG+KVS KI VIE+L+ K D+++LGGGMIFTFYKA+GL VGKSLVE+D +ELA L++ A++KGVKLLLP DVVVADKFAADAES +V A +IP+ WMGLDVGP + +F EAL KT++WNGPMGVFEF+KFAAGT A+A LA+LT KGV TIIGGGDS+AAVEKAGLADKMSHISTGGGASL LLEGK LPGV A++E
Sbjct: 141 VADLYVNDAFGTAHRAHASTEGVTKFLMPSVAGFLMQKELDYLVGAVANPKKPFAAIVGGSKVSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGKSLVEEDKLELATSLIETAKSKGVKLLLPTDVVVADKFAADAESKIVPATAIPDGWMGLDVGPDSIKTFAEALDTTKTVIWNGPMGVFEFEKFAAGTDAIAKQLAELTGKGVTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKPLPGVLALDE 400
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: U5DGY2_AMBTC (Phosphoglycerate kinase n=1 Tax=Amborella trichopoda TaxID=13333 RepID=U5DGY2_AMBTC) HSP 1 Score: 365 bits (937), Expect = 6.040e-122 Identity = 181/260 (69.62%), Postives = 216/260 (83.08%), Query Frame = 1
Query: 1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEE 780
L D YVNDAFGT HRAHAST G+TKF++ V+G L++KEL YL GAV NP RP A IVGG+KVS KI VIE+L+EKCD++LLGGGMIFTFYKA+GL VG SLVEDD ++LA L+++A+AKGV LLLP DVV+ADKFA DAES +V A IP+ WMGLD+GP + +F EAL +T++WNGPMGVFEFDKFA GT A+A LADL++KGV TIIGGGDS+AAVEK G+A+KMSHISTGGGASL LLEGK LPGV A++E
Sbjct: 216 LADIYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEDDKIDLATSLLEKAKAKGVSLLLPTDVVIADKFAPDAESKIVPASGIPDRWMGLDIGPDSIKTFSEALDTTQTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSAKGVTTIIGGGDSVAAVEKVGVAEKMSHISTGGGASLELLEGKALPGVLALDE 475 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9550.21161.1 >prot_Ecto-sp13_S_contig9550.21161.1 ID=prot_Ecto-sp13_S_contig9550.21161.1|Name=mRNA_Ecto-sp13_S_contig9550.21161.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=267bp LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPback to top mRNA from alignment at Ecto-sp13_S_contig9550:1..3837+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9550.21161.1 ID=mRNA_Ecto-sp13_S_contig9550.21161.1|Name=mRNA_Ecto-sp13_S_contig9550.21161.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3837bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9550:1..3837+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9550:1..3837+ >mRNA_Ecto-sp13_S_contig9550.21161.1 ID=mRNA_Ecto-sp13_S_contig9550.21161.1|Name=mRNA_Ecto-sp13_S_contig9550.21161.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=801bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9550:1..3837+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |