mRNA_Ecto-sp13_S_contig9550.21161.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9550.21161.1
Unique NamemRNA_Ecto-sp13_S_contig9550.21161.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: D8LS78_ECTSI (Phosphoglycerate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS78_ECTSI)

HSP 1 Score: 511 bits (1315), Expect = 2.630e-180
Identity = 261/266 (98.12%), Postives = 264/266 (99.25%), Query Frame = 1
Query:    1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEEKTARPM 798
            LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKEL YLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMD+AEAKGV+LLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVA+CLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEEKT RPM
Sbjct:  149 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELKYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDKAEAKGVELLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVASCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEEKTPRPM 414          
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: D8LS77_ECTSI (Phosphoglycerate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS77_ECTSI)

HSP 1 Score: 459 bits (1181), Expect = 5.700e-160
Identity = 231/263 (87.83%), Postives = 247/263 (93.92%), Query Frame = 1
Query:    1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEEKTA 789
            LCDYYVNDAFGT HRAHAST GITKFV+RKVSG+LMEKEL YLKGAVD+PVRPMACIVGGAKVS KITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDD+V+LA  LM +AEAKGVK+LLPEDVVVADKF+  AESD V  DSIPEEWMGLDVGPKT S+FE+ALAPCKTIVWNGPMGVFEFDKFAAGTFAVA+CLADLTSKG ITIIGGGDS+AAVEKA LADKMSHISTGGGASL LLEGK+LPGV+AIEE+T+
Sbjct:  149 LCDYYVNDAFGTAHRAHASTEGITKFVDRKVSGMLMEKELKYLKGAVDSPVRPMACIVGGAKVSSKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDYVDLARDLMSKAEAKGVKMLLPEDVVVADKFSPTAESDTVTVDSIPEEWMGLDVGPKTISAFEDALAPCKTIVWNGPMGVFEFDKFAAGTFAVASCLADLTSKGAITIIGGGDSVAAVEKANLADKMSHISTGGGASLELLEGKELPGVNAIEERTS 411          
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: A0A836CP82_9STRA (Phosphoglycerate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP82_9STRA)

HSP 1 Score: 375 bits (964), Expect = 5.000e-127
Identity = 186/262 (70.99%), Postives = 221/262 (84.35%), Query Frame = 1
Query:    1 LCD-YYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEEK 783
            LCD  YVNDAFGT HRAHAST G+TKFV+  V G LMEKEL YLKGAVD PV+PM CI+GGAKVS KITVIEAL+EKCD+I+LGGGMIFTF+KA+G+  GKSLVED++VELA ++M  A+ KGV++LLP DV++ADKF  DAE+  V    IP++WMGLDVGP + ++F+EAL+ CKTIVWNGPMGVFEF KFA GT  +A  LA+LT  GV TIIGGGDS+AAVE+AGLA+KMSHISTGGGASL LLEGK LPGV+A+E+K
Sbjct:  149 LCDDIYVNDAFGTAHRAHASTEGVTKFVKHSVCGFLMEKELKYLKGAVDAPVKPMGCIIGGAKVSSKITVIEALLEKCDIIILGGGMIFTFFKAQGIPTGKSLVEDEYVELANKIMAAAKEKGVQVLLPTDVIIADKFDKDAEAKTVPVTDIPDDWMGLDVGPDSITTFKEALSTCKTIVWNGPMGVFEFPKFATGTLDIAKLLAELTETGVTTIIGGGDSVAAVEQAGLAEKMSHISTGGGASLELLEGKVLPGVAALEDK 410          
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: UPI0019E3AD6E (Phosphoglycerate kinase n=1 Tax=Oscillatoriaceae cyanobacterium M7585_C2015_266 TaxID=2774341 RepID=UPI0019E3AD6E)

HSP 1 Score: 364 bits (934), Expect = 1.280e-122
Identity = 178/258 (68.99%), Postives = 217/258 (84.11%), Query Frame = 1
Query:    7 DYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEE 780
            D YVNDAFGT HRAHAST G+T++++  V+G L+EKEL YL+ A++NP RP+A IVGG+KVS KI VIEAL+EKCD +L+GGGMIFTFYKA+GL VGKSLVE+D +ELA  L  +A+ KGV+ LLP DVVVADKFAADA +  V+ ++IP+ WMGLD+GP +   F+EALA CKT++WNGPMGVFEFD+FA GT A+A  LA+LT KGV TIIGGGDS+AAVEK GLADKMSHISTGGGASL LLEGK LPG++A++E
Sbjct:  142 DLYVNDAFGTAHRAHASTEGVTRYLKPSVAGFLIEKELQYLQAAIENPQRPLAAIVGGSKVSSKIGVIEALLEKCDKLLIGGGMIFTFYKARGLSVGKSLVEEDKLELARSLEAKAKEKGVQFLLPTDVVVADKFAADANAQTVSVENIPDGWMGLDIGPDSVKMFQEALADCKTVIWNGPMGVFEFDRFAVGTEAIARTLAELTPKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKVLPGIAALDE 399          
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: PGKY_WHEAT (Phosphoglycerate kinase, cytosolic n=2 Tax=Triticum TaxID=4564 RepID=PGKY_WHEAT)

HSP 1 Score: 363 bits (933), Expect = 1.870e-122
Identity = 185/260 (71.15%), Postives = 217/260 (83.46%), Query Frame = 1
Query:    1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEE 780
            + D YVNDAFGT HRAHAST G+TKF+   V+G LM+KEL YL GAV NP +P A IVGG+KVS KI VIE+L+ K D+++LGGGMIFTFYKA+GL VGKSLVE+D +ELA  L++ A++KGVKLLLP DVVVADKFAADAES +V A +IP+ WMGLDVGP +  +F EAL   KT++WNGPMGVFEF+KFAAGT A+A  LA+LT KGV TIIGGGDS+AAVEKAGLADKMSHISTGGGASL LLEGK LPGV A++E
Sbjct:  141 VADLYVNDAFGTAHRAHASTEGVTKFLRPSVAGFLMQKELDYLVGAVANPKKPFAAIVGGSKVSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGKSLVEEDKLELATSLIETAKSKGVKLLLPTDVVVADKFAADAESKIVPATAIPDGWMGLDVGPDSIKTFAEALDTTKTVIWNGPMGVFEFEKFAAGTDAIAKQLAELTGKGVTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKPLPGVLALDE 400          
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: A0A2P2M3R2_RHIMU (Phosphoglycerate kinase n=3 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2M3R2_RHIMU)

HSP 1 Score: 366 bits (940), Expect = 2.190e-122
Identity = 184/260 (70.77%), Postives = 215/260 (82.69%), Query Frame = 1
Query:    1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEE 780
            L D YVNDAFGT HRAHAST G+TKF++  V+G L++KEL YL GAV NP RP A IVGG+KVS KI VIE+L+EKCD++LLGGGMIFTFYKA+GL VG SLVE+D ++LA  L+++A+AKGV LLLP DVV+ADKFA DA S VV A +IPE WMGLD+GP +T +F EAL    T++WNGPMGVFEFDKFA GT AVA  LADL+ KGV TIIGGGDS+AAVEK G+AD MSHISTGGGASL LLEGK+LPGV A+EE
Sbjct:  217 LADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLDLATSLLEKAKAKGVSLLLPTDVVIADKFAPDANSKVVPASAIPEGWMGLDIGPDSTKTFNEALETTNTVIWNGPMGVFEFDKFAVGTEAVARKLADLSGKGVTTIIGGGDSVAAVEKVGVADAMSHISTGGGASLELLEGKELPGVLALEE 476          
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: U5DBW2_AMBTC (Phosphoglycerate kinase n=1 Tax=Amborella trichopoda TaxID=13333 RepID=U5DBW2_AMBTC)

HSP 1 Score: 363 bits (932), Expect = 2.650e-122
Identity = 183/260 (70.38%), Postives = 215/260 (82.69%), Query Frame = 1
Query:    1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEE 780
            L D YVNDAFGT HRAHAST GI KF+   V+G LM+KEL YL GAV NP RP A IVGG+KVS KI VIE+L+EKCD++L+GGGMIFTFY+A+G  VG SLVE+D ++LA  L+++A+AKGV LLLP DVVVADKFA DAES VV A  IPE WMGLD+GP +  +F +AL P KTI+WNGPMGVFEF+KFAAGT A+A  LA+L+ KGV TIIGGGDS+AAVE+AGLADKMSHISTGGGASL LLEGK LPGV A+++
Sbjct:  141 LADLYVNDAFGTAHRAHASTEGIAKFLRPAVAGFLMQKELDYLVGAVSNPKRPFAAIVGGSKVSTKIGVIESLLEKCDILLMGGGMIFTFYEAQGFSVGSSLVEEDKLDLATSLLEKAKAKGVALLLPTDVVVADKFAPDAESKVVPASEIPEGWMGLDIGPDSIKTFNDALEPAKTIIWNGPMGVFEFEKFAAGTKAIAKKLAELSEKGVTTIIGGGDSVAAVEQAGLADKMSHISTGGGASLELLEGKPLPGVLALDD 400          
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: A0A2P7MSD2_9CYAN (Phosphoglycerate kinase n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A2P7MSD2_9CYAN)

HSP 1 Score: 363 bits (932), Expect = 2.650e-122
Identity = 180/260 (69.23%), Postives = 215/260 (82.69%), Query Frame = 1
Query:    1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEE 780
            L D YVNDAFG  HRAHAST G+TK +   V+G LMEKEL YL+GA+D P RP+A IVGG+KVS KI V+EALI+KCD +L+GGGMIFTFYKA+GL VGKSLVE+D +ELA  L  +A AKGV+LLLP DVV+AD FA DA S  V+ D+IP+ WMGLD+GP +  +F+EALA CKT++WNGPMGVFEFDKFAAGT  +A+ LADL+ KG  TIIGGGDS+AAVEK G+A+KMSHISTGGGASL LLEGK LPGV+A++E
Sbjct:  141 LADVYVNDAFGAAHRAHASTEGVTKALSPSVAGYLMEKELQYLQGAIDEPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLAVGKSLVEEDKLELAKELEAKAAAKGVQLLLPTDVVLADNFAPDANSQTVSIDAIPDGWMGLDIGPDSLKAFQEALADCKTVIWNGPMGVFEFDKFAAGTNGIAHTLADLSGKGCCTIIGGGDSVAAVEKVGVAEKMSHISTGGGASLELLEGKVLPGVAALDE 400          
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: A0A3B6QEZ5_WHEAT (Phosphoglycerate kinase n=9 Tax=cellular organisms TaxID=131567 RepID=A0A3B6QEZ5_WHEAT)

HSP 1 Score: 363 bits (931), Expect = 3.760e-122
Identity = 185/260 (71.15%), Postives = 217/260 (83.46%), Query Frame = 1
Query:    1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEE 780
            + D YVNDAFGT HRAHAST G+TKF+   V+G LM+KEL YL GAV NP +P A IVGG+KVS KI VIE+L+ K D+++LGGGMIFTFYKA+GL VGKSLVE+D +ELA  L++ A++KGVKLLLP DVVVADKFAADAES +V A +IP+ WMGLDVGP +  +F EAL   KT++WNGPMGVFEF+KFAAGT A+A  LA+LT KGV TIIGGGDS+AAVEKAGLADKMSHISTGGGASL LLEGK LPGV A++E
Sbjct:  141 VADLYVNDAFGTAHRAHASTEGVTKFLMPSVAGFLMQKELDYLVGAVANPKKPFAAIVGGSKVSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGKSLVEEDKLELATSLIETAKSKGVKLLLPTDVVVADKFAADAESKIVPATAIPDGWMGLDVGPDSIKTFAEALDTTKTVIWNGPMGVFEFEKFAAGTDAIAKQLAELTGKGVTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKPLPGVLALDE 400          
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Match: U5DGY2_AMBTC (Phosphoglycerate kinase n=1 Tax=Amborella trichopoda TaxID=13333 RepID=U5DGY2_AMBTC)

HSP 1 Score: 365 bits (937), Expect = 6.040e-122
Identity = 181/260 (69.62%), Postives = 216/260 (83.08%), Query Frame = 1
Query:    1 LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNPVRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGKSLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADSIPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVANCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGKDLPGVSAIEE 780
            L D YVNDAFGT HRAHAST G+TKF++  V+G L++KEL YL GAV NP RP A IVGG+KVS KI VIE+L+EKCD++LLGGGMIFTFYKA+GL VG SLVEDD ++LA  L+++A+AKGV LLLP DVV+ADKFA DAES +V A  IP+ WMGLD+GP +  +F EAL   +T++WNGPMGVFEFDKFA GT A+A  LADL++KGV TIIGGGDS+AAVEK G+A+KMSHISTGGGASL LLEGK LPGV A++E
Sbjct:  216 LADIYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEDDKIDLATSLLEKAKAKGVSLLLPTDVVIADKFAPDAESKIVPASGIPDRWMGLDIGPDSIKTFSEALDTTQTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSAKGVTTIIGGGDSVAAVEKVGVAEKMSHISTGGGASLELLEGKALPGVLALDE 475          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9550.21161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS78_ECTSI2.630e-18098.12Phosphoglycerate kinase n=2 Tax=Ectocarpus TaxID=2... [more]
D8LS77_ECTSI5.700e-16087.83Phosphoglycerate kinase n=1 Tax=Ectocarpus silicul... [more]
A0A836CP82_9STRA5.000e-12770.99Phosphoglycerate kinase n=1 Tax=Tribonema minus Ta... [more]
UPI0019E3AD6E1.280e-12268.99Phosphoglycerate kinase n=1 Tax=Oscillatoriaceae c... [more]
PGKY_WHEAT1.870e-12271.15Phosphoglycerate kinase, cytosolic n=2 Tax=Triticu... [more]
A0A2P2M3R2_RHIMU2.190e-12270.77Phosphoglycerate kinase n=3 Tax=Rhizophora mucrona... [more]
U5DBW2_AMBTC2.650e-12270.38Phosphoglycerate kinase n=1 Tax=Amborella trichopo... [more]
A0A2P7MSD2_9CYAN2.650e-12269.23Phosphoglycerate kinase n=6 Tax=Cyanobacteria TaxI... [more]
A0A3B6QEZ5_WHEAT3.760e-12271.15Phosphoglycerate kinase n=9 Tax=cellular organisms... [more]
U5DGY2_AMBTC6.040e-12269.62Phosphoglycerate kinase n=1 Tax=Amborella trichopo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9550contigEcto-sp13_S_contig9550:1..3837 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score513.8
Seed ortholog evalue4.7e-143
Seed eggNOG ortholog2880.D8LS78
Model size801
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.phosphoglycerate kinase activity
EggNOG OGsCOG0126@1,KOG1367@2759
Cds size801
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9550.21161.1prot_Ecto-sp13_S_contig9550.21161.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9550 1..3837 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464220.276408-CDS-Ecto-sp13_S_contig9550:0..901681464220.276408-CDS-Ecto-sp13_S_contig9550:0..90Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9550 1..90 +
1681464220.2886739-CDS-Ecto-sp13_S_contig9550:481..5891681464220.2886739-CDS-Ecto-sp13_S_contig9550:481..589Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9550 482..589 +
1681464220.2993474-CDS-Ecto-sp13_S_contig9550:1030..11381681464220.2993474-CDS-Ecto-sp13_S_contig9550:1030..1138Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9550 1031..1138 +
1681464220.3093376-CDS-Ecto-sp13_S_contig9550:1869..19711681464220.3093376-CDS-Ecto-sp13_S_contig9550:1869..1971Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9550 1870..1971 +
1681464220.3192704-CDS-Ecto-sp13_S_contig9550:2493..26191681464220.3192704-CDS-Ecto-sp13_S_contig9550:2493..2619Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9550 2494..2619 +
1681464220.3305728-CDS-Ecto-sp13_S_contig9550:3349..34751681464220.3305728-CDS-Ecto-sp13_S_contig9550:3349..3475Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9550 3350..3475 +
1681464220.3428667-CDS-Ecto-sp13_S_contig9550:3696..38371681464220.3428667-CDS-Ecto-sp13_S_contig9550:3696..3837Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9550 3697..3837 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9550.21161.1

>prot_Ecto-sp13_S_contig9550.21161.1 ID=prot_Ecto-sp13_S_contig9550.21161.1|Name=mRNA_Ecto-sp13_S_contig9550.21161.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=267bp
LCDYYVNDAFGTVHRAHASTAGITKFVERKVSGLLMEKELMYLKGAVDNP
VRPMACIVGGAKVSCKITVIEALIEKCDVILLGGGMIFTFYKAKGLGVGK
SLVEDDFVELAARLMDEAEAKGVKLLLPEDVVVADKFAADAESDVVAADS
IPEEWMGLDVGPKTTSSFEEALAPCKTIVWNGPMGVFEFDKFAAGTFAVA
NCLADLTSKGVITIIGGGDSIAAVEKAGLADKMSHISTGGGASLGLLEGK
DLPGVSAIEEKTARPM*
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mRNA from alignment at Ecto-sp13_S_contig9550:1..3837+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9550.21161.1 ID=mRNA_Ecto-sp13_S_contig9550.21161.1|Name=mRNA_Ecto-sp13_S_contig9550.21161.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3837bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9550:1..3837+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGTGTGACTACTACGTCAATGATGCCTTCGGAACCGTGCACCGCGCCCA CGCATCCACCGCGGGCATCACCAAGTTCGTCGAGCGCAAGGTGAAGCAAG CGTACCGTCCGGTTTTTTCCCTTCAGAAAACGCGTGCGAGCGTGCCTTCT CTTCCTGGCATGTGATGGCGTGATCGGGCGGTGTAGAGTAGTCGACACCA AGGCTTGGTCATGTACAGCACCGTCGTGTGGGTCTCTTCCATATCCATTG CACGTGATCGCATCAAAGGATCGACATCGATCGGGCTGACTATTCTGGTC TGAAGATGACCCGCCGACGGAGAGGAGACATCGCATCGCGGGGCACATGG CCACCCACCCACCACCGCCCTCCGGTTAACCTGCAATGTACCCAACATTG TCTTGGGCTCCAACCCGCTATCGAACGTTCCTCGTGCCCGGTTGTTGGTG CGTTCGGCGACATCTCTCGCTTTTGGCTCAGGTGTCCGGCTTGTTGATGG AGAAGGAGCTCATGTACCTCAAGGGAGCCGTGGACAACCCCGTCCGGCCG ATGGCGTGCATTGTGGGGGGTGCCAAGGTCTCCTGCAAGGTAAAAATTAT CGGAATCATTTGTTGGCGGTACATGAACACGAGAGGGTGTGAGCTACCTG TGTTATAACACGACTGCCTTTTCCACCGCCCCTGGCCTTGTCCGCAGTTA ACGCCTCCGTTGTGTGTGGGTCTGTTTGGCTCGTCCTACCATGCGAAAGA GGTCGCGGTCTCGGGGTTTCCCACTCGAAAGCAATATCTCGATGGCCTCC CAGGGTTCGGCGAGGAGGCTGTAGACCGCAAGGTGTTGCTATCAAACAGC TTCAGGCAGCCAAATATTCGATATGGCGCGTTTTAGTTTTCCAGCGGAAA ACGTGTCACTCACACGGGGACGCCCTGCTGGAGGGTGAGCAACGTTTCAC GGTTGGTCATGTACGTGATCCGCGTTCGCACTGGGCATGATGGCTCTTGC GCCCATGTCTTCTTTTTTTTTTTCGTACAGATAACGGTGATCGAAGCTCT GATCGAAAAGTGTGACGTCATCCTCCTCGGGGGCGGCATGATCTTCACCT TCTACAAGGCCAAGGGACTCGGAGTTGGCAAGTCCTTGGTGAGAACAACG GCGTAGCGTTATTTAGTGTGCATGCACATGGCTGGCCGTGTTTTCCCACT CGTGTGATGTTGTGGTGTGTAACGGGCCGCCTGTCCCATCGAGACCGGAG ATGGGCGCCGTTTGGCGGACACGGTTGCTTTCTTCTTTGCGAAGACAACG GCGCGTAGCCTGGATGCTCACACGCGCGTGAGGCACCTCGGTCTGGTGTA TTTCGTGGCACTATTTTAGCAGGCTTGTTTGGCCGGAGCCCCACGTCTTA TGTGTGTTTGCTCGCACATCGCTCGTTGCATGCTATCGCTTGCGGTTGGT GCCCATGGAGCAGCGGCGGGCTGAAAACGTATCCCCGCTGCGACGCTCGT TTGTGGAACGGTTGTGCAATAGATTCTGCTGCAGTTGTCATGGTAAAGAG TAATGTTGTTTTTCTGAACCAAGAGTTCGATTGTTCGGATACCTGCGCAA GTCAACAGTTTCTGGTTCCCTGTGTCAACGCCATTGCCTTTTTCTGTCTC ATTTCTTTTTATCCATCTCGTCGCCGGCTATCTTCACACCTGTTGACAAC AACCTCGGCGCGATAGCTGTCTGTGCACAGGGCCTACCCCCACCTCTGCT GCCTTCTCTCCCTCCCTGCCTGCCCCCCCCCTATGCTCTGTCCGTTCTTG GACCTGTTGCGCTTTCCTCGCGCGCACTTTGCCCTTATTGGTGTACCTTT CCACCCTTACCATTCCCAGGTGGAAGATGACTTTGTCGAGCTCGCGGCTA GGCTGATGGACGAGGCGGAGGCGAAGGGTGTCAAGTTGCTGCTTCCGGAG GACGTCGTCGTTGCCGACAAGGTGCGTGCGTGAGAGCAGCAGGTTCTAAG TTCAAGTGCAGCGATCATTCAGAGGTGTAGCGACGACTTCACACAAACAA TCCTTGCCGTCGTCCGGCCCACGTGGCGTCCCTTCACATGGGGAGAAACA TATACGATAGATGGAAGCGAGGTTGAAAAACACGCACACCCACACGCACG TGAAGGCCATGGAGTTTGTCATTTTCTACTTGACAAGAGGAGGTGTGGCT ATCATGTTCTCGTGACGCGGAATCCGCACGTATGTGTCGTAACTGTCTCA CGGCAATCAGTCGCCTCTGTTGACCCGAGGACCATCAGGGAGGATCTGCC AATATCTTGGCAGATACACGACCCGTGGCGACCATACGTTTGAATTTCAA GCTTGTCTGTCTTGCCTGTATCTGGCCAGCTTCCCCCGTCAACTGACACG TGTTCCACCGCACCGCGCCCCACTGAAAGTACAACGGAGGTTTCCAATAA CAATGAAGCTTATTTTTGTTCTGTTCACCTCTGTTCAATGCAGTTTGCCG CAGACGCGGAGTCAGACGTCGTCGCGGCCGACAGCATTCCGGAGGAGTGG ATGGGGCTTGACGTGGGGCCGAAGACTACTTCATCCTTCGAGGAGGCCCT GGCTCCATGCAAAACAATTGTGAGGGAAAAAAGGGAGTGGCCTAGCGTTG GAGTAAGCGTACCGTGTAGGCGGCGTCGTGTGGGGTTTTACTATACGCGT GGTTGGGAGGACGTGATTTGTCTGGTCAAGGAGTGGCCCGGCTCGATGCT TGAGAGGTTTTCCAGACCATACATATTTTGGGAGTATTTGTATGACGCAC TGCTCCGGTGAGCCTGGCGGACATGTATCGCACAGAGCGTTTGTGTCTCG TGTGTTAATCAGGAGGGTCTCTGACTTGGCTATTGTGAAACGAAGTATCG TTCATGGTGATGCAGTAGCAGGGAGGTACTACTGCCATCTACACGAAGGA AAAATACGCGCCAGTTAGACCATCACTGGCGCATGGCTATATGAATCATG CATTACCCGCCGCTAAGTGCGCAAAGAGCGTGAGGCATTCGGTGTCAGAA AATGCACTCACGGTGAGAAAGGTAAAGACGTACCTACAGTCACACATGTT TTGTACGTGATCTCGTCATTTTCCCCTCATGATGTGGAAGCCGAAGAACT TGACTGGGGTCACGAAAAACCAAATTGGGGGTCACGAAAAACCAAATTGA TTTTTGGGTCGACAGACATGATGCGCGCGCCACCCACCCACCCACTCCTC CTCCCCCCGACCGCTCCACGCACCCCTATCTCCCTCCCTCTTCAACCGAA ACCCTGACCCTTGCCTCCCTTGCTTCCGCGACGGTGGCGGTGCTGTCAGG TGTGGAACGGACCTATGGGGGTGTTCGAGTTCGACAAGTTTGCCGCGGGA ACGTTCGCCGTGGCCAACTGCCTGGCCGACCTCACCTCGAAGGGGGTGAT CACCATCATCGGAGGCGGAGACTCGGTACGATTGCGACATCCCCGGCTTT CTCGTCTTATGGGCTTCTCCGAAATACAGTCACAGGCGACGGTTAGATCC TCCTCGTTGTCACTCCCGACGCTTCAACACCTCCATCCCCCCGTCAAAAG AATGAAAAATATGACGAAACGTGCCCTTTTTCTGTACCAACTATCCCTGC TAATCTTATTGACCGGAATATCCGGGCCAACTACTGCTTACCGTAGATTG CCGCCGTGGAGAAGGCCGGCCTTGCTGACAAGATGTCCCACATCTCCACC GGCGGCGGGGCCAGCCTCGGCCTGCTCGAGGGCAAGGATCTGCCGGGGGT CAGCGCCATCGAGGAAAAAACGGCGCGGCCGATGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9550:1..3837+

>mRNA_Ecto-sp13_S_contig9550.21161.1 ID=mRNA_Ecto-sp13_S_contig9550.21161.1|Name=mRNA_Ecto-sp13_S_contig9550.21161.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=801bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9550:1..3837+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGTGTGACTACTACGTCAATGATGCCTTCGGAACCGTGCACCGCGCCCA
CGCATCCACCGCGGGCATCACCAAGTTCGTCGAGCGCAAGGTGTCCGGCT
TGTTGATGGAGAAGGAGCTCATGTACCTCAAGGGAGCCGTGGACAACCCC
GTCCGGCCGATGGCGTGCATTGTGGGGGGTGCCAAGGTCTCCTGCAAGAT
AACGGTGATCGAAGCTCTGATCGAAAAGTGTGACGTCATCCTCCTCGGGG
GCGGCATGATCTTCACCTTCTACAAGGCCAAGGGACTCGGAGTTGGCAAG
TCCTTGGTGGAAGATGACTTTGTCGAGCTCGCGGCTAGGCTGATGGACGA
GGCGGAGGCGAAGGGTGTCAAGTTGCTGCTTCCGGAGGACGTCGTCGTTG
CCGACAAGTTTGCCGCAGACGCGGAGTCAGACGTCGTCGCGGCCGACAGC
ATTCCGGAGGAGTGGATGGGGCTTGACGTGGGGCCGAAGACTACTTCATC
CTTCGAGGAGGCCCTGGCTCCATGCAAAACAATTGTGTGGAACGGACCTA
TGGGGGTGTTCGAGTTCGACAAGTTTGCCGCGGGAACGTTCGCCGTGGCC
AACTGCCTGGCCGACCTCACCTCGAAGGGGGTGATCACCATCATCGGAGG
CGGAGACTCGATTGCCGCCGTGGAGAAGGCCGGCCTTGCTGACAAGATGT
CCCACATCTCCACCGGCGGCGGGGCCAGCCTCGGCCTGCTCGAGGGCAAG
GATCTGCCGGGGGTCAGCGCCATCGAGGAAAAAACGGCGCGGCCGATGTG
A
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