prot_Ecto-sp13_S_contig94386.21046.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig94386.21046.1
Unique Nameprot_Ecto-sp13_S_contig94386.21046.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length41
Homology
BLAST of mRNA_Ecto-sp13_S_contig94386.21046.1 vs. uniprot
Match: A0A6H5LFS5_9PHAE (Ribosomal_L7Ae domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFS5_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 2.590e-14
Identity = 38/40 (95.00%), Postives = 38/40 (95.00%), Query Frame = 0
Query:    1 LIVAPNVDAVGVEGGLDDKVVEIIDKARGEETPVVFALSK 40
            LIVAPNVDAVG EGGLDDKVVEIIDKAR EETPVVFALSK
Sbjct:  949 LIVAPNVDAVGGEGGLDDKVVEIIDKAREEETPVVFALSK 988          
BLAST of mRNA_Ecto-sp13_S_contig94386.21046.1 vs. uniprot
Match: D8LDS8_ECTSI (SECIS binding protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS8_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 1.500e-12
Identity = 36/40 (90.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:    1 LIVAPNVDAVGVEGGLDDKVVEIIDKARGEETPVVFALSK 40
            LIVAPNVDAVG EGGLDDKVVEIIDKAR  E PVVFALSK
Sbjct:  757 LIVAPNVDAVGGEGGLDDKVVEIIDKAREAEYPVVFALSK 796          
BLAST of mRNA_Ecto-sp13_S_contig94386.21046.1 vs. uniprot
Match: A0A6A5AWB8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AWB8_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 6.720e-8
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 LIVAPNVDAVGVEGGLDDKVVEIIDKARGEETPVVFALSK 40
            L+VA N+D    EGGLDDKV+E+ID AR   TPV+F+LSK
Sbjct:    3 LLVAYNIDECAAEGGLDDKVMELIDLARLHNTPVIFSLSK 42          
BLAST of mRNA_Ecto-sp13_S_contig94386.21046.1 vs. uniprot
Match: A0A7S0CQ98_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CQ98_MICPS)

HSP 1 Score: 55.1 bits (131), Expect = 1.160e-7
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    1 LIVAPNVDAVGVEGGLDDKVVEIIDKARGEETPVVFALSK 40
            ++VAPN++ VG+EGGLDD V  II  ARG  TPVVFAL++
Sbjct:  847 VVVAPNIEEVGLEGGLDDVVAAIISAARGNGTPVVFALTR 886          
BLAST of mRNA_Ecto-sp13_S_contig94386.21046.1 vs. uniprot
Match: A0A7S0GN25_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GN25_MICPS)

HSP 1 Score: 55.1 bits (131), Expect = 1.160e-7
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    1 LIVAPNVDAVGVEGGLDDKVVEIIDKARGEETPVVFALSK 40
            ++VAPN++ VG+EGGLDD V  II  ARG  TPVVFAL++
Sbjct:  471 VVVAPNIEEVGLEGGLDDVVAAIISAARGNGTPVVFALTR 510          
BLAST of mRNA_Ecto-sp13_S_contig94386.21046.1 vs. uniprot
Match: A0A067BZX4_SAPPC (Ribosomal_L7Ae domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BZX4_SAPPC)

HSP 1 Score: 53.5 bits (127), Expect = 4.070e-7
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 LIVAPNVDAVGVEGGLDDKVVEIIDKARGEETPVVFALSK 40
            L+VA +VD    EGGLDDK+VE+ID AR  + PVVFALSK
Sbjct:  433 LLVAYDVDECAAEGGLDDKIVELIDLARANKIPVVFALSK 472          
BLAST of mRNA_Ecto-sp13_S_contig94386.21046.1 vs. uniprot
Match: A0A397D1T5_9STRA (RRM domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D1T5_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 5.570e-7
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 LIVAPNVDAVGVEGGLDDKVVEIIDKARGEETPVVFALSK 40
            L+VA N+D    EGGLDDKV+E+ID AR   TPV+F+LSK
Sbjct:  378 LLVAYNIDECAAEGGLDDKVMELIDLARLHNTPVIFSLSK 417          
BLAST of mRNA_Ecto-sp13_S_contig94386.21046.1 vs. uniprot
Match: A0A397AHD0_9STRA (Ribosomal_L7Ae domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AHD0_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 7.590e-7
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 LIVAPNVDAVGVEGGLDDKVVEIIDKARGEETPVVFALSK 40
            L+VA N+D    EGGLDDKV+E+ID AR   TPV+F+LSK
Sbjct:  391 LMVAYNIDECAAEGGLDDKVMELIDLARLHNTPVIFSLSK 430          
BLAST of mRNA_Ecto-sp13_S_contig94386.21046.1 vs. uniprot
Match: W4G1D3_9STRA (Ribosomal_L7Ae domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1D3_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 7.600e-7
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 LIVAPNVDAVGVEGGLDDKVVEIIDKARGEETPVVFALSK 40
            L+VA N+D    EGGLDDKV+E+ID AR   TPV+F+LSK
Sbjct:  554 LMVAYNIDECAAEGGLDDKVMELIDLARLHNTPVIFSLSK 593          
BLAST of mRNA_Ecto-sp13_S_contig94386.21046.1 vs. uniprot
Match: T0RXS7_SAPDV (RRM domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RXS7_SAPDV)

HSP 1 Score: 52.4 bits (124), Expect = 1.040e-6
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 LIVAPNVDAVGVEGGLDDKVVEIIDKARGEETPVVFALSK 40
            L+VA +VD    +GGLDDK+VE+ID AR  + PVVFALSK
Sbjct:  435 LLVAYDVDECAADGGLDDKIVELIDLARANKIPVVFALSK 474          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig94386.21046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5LFS5_9PHAE2.590e-1495.00Ribosomal_L7Ae domain-containing protein n=1 Tax=E... [more]
D8LDS8_ECTSI1.500e-1290.00SECIS binding protein 2 n=1 Tax=Ectocarpus silicul... [more]
A0A6A5AWB8_9STRA6.720e-862.50Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A7S0CQ98_MICPS1.160e-762.50Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A7S0GN25_MICPS1.160e-762.50Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A067BZX4_SAPPC4.070e-765.00Ribosomal_L7Ae domain-containing protein n=1 Tax=S... [more]
A0A397D1T5_9STRA5.570e-762.50RRM domain-containing protein n=8 Tax=Aphanomyces ... [more]
A0A397AHD0_9STRA7.590e-762.50Ribosomal_L7Ae domain-containing protein (Fragment... [more]
W4G1D3_9STRA7.600e-762.50Ribosomal_L7Ae domain-containing protein n=3 Tax=A... [more]
T0RXS7_SAPDV1.040e-662.50RRM domain-containing protein n=1 Tax=Saprolegnia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig94386contigEcto-sp13_S_contig94386:212..334 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig94386.21046.1mRNA_Ecto-sp13_S_contig94386.21046.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig94386 212..334 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig94386.21046.1 ID=prot_Ecto-sp13_S_contig94386.21046.1|Name=mRNA_Ecto-sp13_S_contig94386.21046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=41bp
LIVAPNVDAVGVEGGLDDKVVEIIDKARGEETPVVFALSK*
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