prot_Ecto-sp13_S_contig941.21006.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig941.21006.1
Unique Nameprot_Ecto-sp13_S_contig941.21006.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length404
Homology
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BLAST of mRNA_Ecto-sp13_S_contig941.21006.1 vs. uniprot
Match: D8LDG6_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG6_ECTSI)

HSP 1 Score: 585 bits (1508), Expect = 1.420e-197
Identity = 367/404 (90.84%), Postives = 374/404 (92.57%), Query Frame = 0 
Query:    1 MVHNNGGPAPGGVGSPSKNIPRNPVASSPNKNKASALPTKXXXXXXXXXXXXXXXXXXXTGATA-AGLAQPNPSGGEQARKVADSASSSARESGASGEKTGGGEGTRVHRESRESGGCWGSKGKVVVAVSRRVSVLRVSTAXXXXXXXXXXXXXXXXXASRASYAAGSRRVSQLARSRTSVAAGAGHTSGEASSAGDVGTSPVKEDEEMEEGLRQADGPASRRESAMLLAAQQEENFFEKARRCVLRAIGVSRKSGQGEGGSFSGPGSMRGGNSPVVAETAAEIALRHKIKVKMPKRPGKKAMDRASVDDHAWDVEQQQGSDPFDGAEGVIEEADEGSGGYPNRASSSAVISGIERWVFGGKQERTTPIMSPNRNKPATTGASSTAEVSPAPGTTTMHDYVRAM 403
            MVHNNGGPAPGGVGSPSKNIPRNPVASSPNKNKASALPTKXXXXXXXXXXXXXXXXXXX      AG AQPNPSGG+QARKVADSASSSARESGASGEKT GGEGTRVHRESRESGGCWGSKGKVVVAVSRRVSVLRVSTAXXXXXXXXXXXXXXXXXASRASYAAG+RRVSQLARSRTSVAA AGHTSGEASS+GD+GTSPVKEDEEMEEGLRQ DGP+SR             NFFEKARRCVLRAIGVSRKSGQGE GSFSGPGSMRGGNSP+VAETAAEIALRHKIKVKMPKRPGKKAMDRASVDDHAWDVEQQ+G D FD AEGVIEEADE SGGYPNRASSSAVISGIERWVFGGKQERTTPIMSPNRNKPAT G SSTAEVSPAPGTTTMHDYVRAM
Sbjct:  717 MVHNNGGPAPGGVGSPSKNIPRNPVASSPNKNKASALPTKXXXXXXXXXXXXXXXXXXXXXXXXXAGSAQPNPSGGKQARKVADSASSSARESGASGEKTVGGEGTRVHRESRESGGCWGSKGKVVVAVSRRVSVLRVSTAXXXXXXXXXXXXXXXXXASRASYAAGTRRVSQLARSRTSVAAAAGHTSGEASSSGDLGTSPVKEDEEMEEGLRQEDGPSSRXXXXXXXXXXXXXNFFEKARRCVLRAIGVSRKSGQGEEGSFSGPGSMRGGNSPIVAETAAEIALRHKIKVKMPKRPGKKAMDRASVDDHAWDVEQQEGPDTFDEAEGVIEEADEESGGYPNRASSSAVISGIERWVFGGKQERTTPIMSPNRNKPATAGPSSTAEVSPAPGTTTMHDYVRAM 1120
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BLAST of mRNA_Ecto-sp13_S_contig941.21006.1 vs. uniprot
Match: A0A6H5JCR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR3_9PHAE)

HSP 1 Score: 434 bits (1117), Expect = 4.190e-150
Identity = 233/246 (94.72%), Postives = 238/246 (96.75%), Query Frame = 0 
Query:  158 ASRASYAAGSRRVSQLARSRTSVAAGAGHTSGEASSAGDVGTSPVKEDEEMEEGLRQADGPASRRESAMLLAAQQEENFFEKARRCVLRAIGVSRKSGQGEGGSFSGPGSMRGGNSPVVAETAAEIALRHKIKVKMPKRPGKKAMDRASVDDHAWDVEQQQGSDPFDGAEGVIEEADEGSGGYPNRASSSAVISGIERWVFGGKQERTTPIMSPNRNKPATTGASSTAEVSPAPGTTTMHDYVRAM 403
            ASRASYAAGSRRVSQLARSRTSVAAGAGHTSGE SS+GD+GTSPVKE EEMEEGLRQ DGPASRRESAMLLAAQQEENFFEKARRCVLRAIGVSRKSGQGEGGSFSGPGSMRGG SPVVAETAAEIALRHKIKVKMPKRPGKKAMDRASVDDH WDVEQQQGSDPFD +EGVIE+AD+ SGGYPNRASSSAVISGIERWVFGGKQERTTPIMSPNRNKPAT GASSTAEVSPAPGTTTMHDYVRAM
Sbjct:   26 ASRASYAAGSRRVSQLARSRTSVAAGAGHTSGEPSSSGDLGTSPVKEGEEMEEGLRQVDGPASRRESAMLLAAQQEENFFEKARRCVLRAIGVSRKSGQGEGGSFSGPGSMRGGTSPVVAETAAEIALRHKIKVKMPKRPGKKAMDRASVDDHPWDVEQQQGSDPFDESEGVIEKADDESGGYPNRASSSAVISGIERWVFGGKQERTTPIMSPNRNKPATAGASSTAEVSPAPGTTTMHDYVRAM 271
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BLAST of mRNA_Ecto-sp13_S_contig941.21006.1 vs. uniprot
Match: A0A6H5JEB3_9PHAE (Kinesin-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEB3_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 6.580e-51
Identity = 115/139 (82.73%), Postives = 117/139 (84.17%), Query Frame = 0 
Query:    2 VHNNGGPAPGGVGSPSKNIPRNPVASSPNKNKASALPTKXXXXXXXXXXXXXXXXXXXTGATAAGLAQPNPSGGEQARKVADSASSSARESGASGEKTGGGEGTRVHRESRESGGCWGSKGKVVVAVSRRVSVLRVSTA 140
            VH+NGGPAPGGVGSPSKNIPRNPVASSPNKNKASALPTK XXX                 ATAAG  QPNP GG+QARKVADSASSSARESGASGEKTGG EGTRVHRESRESGGCWGSKGKVVVAVSRRVSVLRVSTA
Sbjct:  717 VHSNGGPAPGGVGSPSKNIPRNPVASSPNKNKASALPTKKXXXASNSGYPPIAATAAAV-ATAAGSPQPNPLGGKQARKVADSASSSARESGASGEKTGGAEGTRVHRESRESGGCWGSKGKVVVAVSRRVSVLRVSTA 854
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig941.21006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDG6_ECTSI1.420e-19790.84Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JCR3_9PHAE4.190e-15094.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEB3_9PHAE6.580e-5182.73Kinesin-like protein n=1 Tax=Ectocarpus sp. CCAP 1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig941contigEcto-sp13_S_contig941:1222..5948 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig941.21006.1mRNA_Ecto-sp13_S_contig941.21006.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig941 61..6593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig941.21006.1 ID=prot_Ecto-sp13_S_contig941.21006.1|Name=mRNA_Ecto-sp13_S_contig941.21006.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=404bp
MVHNNGGPAPGGVGSPSKNIPRNPVASSPNKNKASALPTKKKKKASNSGY
PPIAAAAAATGATAAGLAQPNPSGGEQARKVADSASSSARESGASGEKTG
GGEGTRVHRESRESGGCWGSKGKVVVAVSRRVSVLRVSTAGSRRVSSVRA
SFANGRRASRASYAAGSRRVSQLARSRTSVAAGAGHTSGEASSAGDVGTS
PVKEDEEMEEGLRQADGPASRRESAMLLAAQQEENFFEKARRCVLRAIGV
SRKSGQGEGGSFSGPGSMRGGNSPVVAETAAEIALRHKIKVKMPKRPGKK
AMDRASVDDHAWDVEQQQGSDPFDGAEGVIEEADEGSGGYPNRASSSAVI
SGIERWVFGGKQERTTPIMSPNRNKPATTGASSTAEVSPAPGTTTMHDYV
RAM*
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