mRNA_Ecto-sp13_S_contig93.20891.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig93.20891.1 vs. uniprot
Match: A0A6H5L0Q6_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q6_9PHAE) HSP 1 Score: 578 bits (1491), Expect = 2.130e-197 Identity = 308/351 (87.75%), Postives = 321/351 (91.45%), Query Frame = 2
Query: 770 MATPANPPPDLSSRGPPATTTSPTNPGATATDEGWHGRVVVDSGDPAVTAATATAKASRGTPTAPAAAWPTASCSEEAVGTCLERFVDLRPPSKRSKEEGSVNAPTTTGLECESAISATGPGPDANAPAGSGQPSCGDEA--TAAVGTMKPSGCGASSDPAGSVVSTVGATGDGA--VESPRSLSAWLTEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTG 1810
MATPANPPP LSSRG PATTTSPTNPGATATDEGWHG+V VDSG PAV +ASRG+PTA AAAWPTASCSE +VGTCLER VDLRPPSKR+KEEG NAPTTTGLEC+SAISATGPG +A APAGSGQ SCGDE+ +AA GTMKPSGC ASS+PAGSVVS G T DGA +ESPRSLSAWL EGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMG+TVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLF+PVWHDRGVLVDGGVRDTTG
Sbjct: 1 MATPANPPPALSSRGLPATTTSPTNPGATATDEGWHGKVEVDSGSPAVAXXXXXXEASRGSPTALAAAWPTASCSEGSVGTCLERSVDLRPPSKRAKEEGRANAPTTTGLECKSAISATGPGAEATAPAGSGQRSCGDESKDSAAFGTMKPSGCAASSNPAGSVVSRGGGTSDGAGVLESPRSLSAWLKEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGDTVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLFSPVWHDRGVLVDGGVRDTTG 351
BLAST of mRNA_Ecto-sp13_S_contig93.20891.1 vs. uniprot
Match: D8LEM2_ECTSI (Patatin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM2_ECTSI) HSP 1 Score: 376 bits (966), Expect = 6.620e-120 Identity = 194/203 (95.57%), Postives = 194/203 (95.57%), Query Frame = 2
Query: 1208 MKPSGCGASSDPAGSVVSTVGATGDGA--VESPRSLSAWLTEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTG 1810
MKPSG GASSDPAGSVVS GATGDGA VESPRSLSAWL EGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLP VRRFDQGRIPLAVSAFDVSRL TRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTG
Sbjct: 1 MKPSGSGASSDPAGSVVSRAGATGDGAGVVESPRSLSAWLKEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPDDVRRFDQGRIPLAVSAFDVSRLMTRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTG 203
BLAST of mRNA_Ecto-sp13_S_contig93.20891.1 vs. uniprot
Match: A0A835YR40_9STRA (Phospholipase A(2) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR40_9STRA) HSP 1 Score: 208 bits (530), Expect = 1.100e-53 Identity = 102/176 (57.95%), Postives = 131/176 (74.43%), Query Frame = 2
Query: 1289 VESPRSLSAWLTE-GPFVLSMSPGFFGFYAHIGALIALDNEGLLN-EVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTG 1810
V +P SL+ WL + + L ++PGFFGFYAHIG L ALD GLL +VSF +GASAG LV GL+AAGL+P++M + VV ++R DFWDP G G +LRG+ FE +++ +LP GV FDQ R+PL V+ + +SR TTR + EG IA ALRA+CTFP LF PVWH +GVL+DGGV DT G
Sbjct: 22 VATPPSLAQWLAQQSKYALGLAPGFFGFYAHIGVLKALDEAGLLEGKVSFVSGASAGALVGGLYAAGLTPSEMAQRVVAYQRGDFWDPPGVGAMLRGRAFEGLIRSSLPEGVTTFDQCRLPLGVTGYSLSRFTTRVIQEGDIALALRASCTFPVLFQPVWHPQGVLMDGGVFDTAG 197
BLAST of mRNA_Ecto-sp13_S_contig93.20891.1 vs. uniprot
Match: A0A0S8EUV8_9GAMM (PNPLA domain-containing protein n=1 Tax=Gammaproteobacteria bacterium SG8_31 TaxID=1703405 RepID=A0A0S8EUV8_9GAMM) HSP 1 Score: 155 bits (392), Expect = 1.350e-39 Identity = 78/171 (45.61%), Postives = 110/171 (64.33%), Query Frame = 2
Query: 1298 PRSLSAWLTEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTG 1810
P +L +WL + PF L +S GFF F+AH G L AL E L+ +G+SAG L GL+AAGL P ++ V R+ DFWDP GLLRG++F +++ +P V+R + R L+VSAFD+ RL TR + G +A++L A+C PG+F P+WH G+L+DGG+RD G
Sbjct: 4 PETLRSWLGKEPFTLGLSSGFFSFFAHGGVLDALVEESLVPAA--VSGSSAGALTGGLWAAGLEPAEIRRLYVGLRKKDFWDPSPGPGLLRGRRFRRLIRSVIP--VQRLEHCRTRLSVSAFDLFRLRTRVMTTGDLARSLYASCAVPGMFHPLWHQGGLLLDGGIRDRPG 170
BLAST of mRNA_Ecto-sp13_S_contig93.20891.1 vs. uniprot
Match: A0A0S8FKL7_9GAMM (PNPLA domain-containing protein n=1 Tax=Gammaproteobacteria bacterium SG8_31 TaxID=1703405 RepID=A0A0S8FKL7_9GAMM) HSP 1 Score: 155 bits (391), Expect = 1.970e-39 Identity = 80/169 (47.34%), Postives = 107/169 (63.31%), Query Frame = 2
Query: 1304 SLSAWLTEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTG 1810
+L WL PF L MS GFF F++H G L AL +E L+ E +G+SAG L AGL+AAGL PT++ E V R+ DFWDP GLLRG++F +++ P V+R + R PL VS FD+ R+ TR L G +A+AL A+C P +F P+WH G L+DGG+ D G
Sbjct: 6 TLRDWLEAEPFTLVMSSGFFSFFSHCGVLAALADESLVPEA--VSGSSAGALTAGLWAAGLEPTEIRELYVSLRKEDFWDPAPGPGLLRGRRFRTLIRRASP--VQRLEHCRRPLTVSVFDLLRMRTRVLSSGDLARALYASCAVPLMFHPLWHQGGWLIDGGLGDRPG 170
BLAST of mRNA_Ecto-sp13_S_contig93.20891.1 vs. uniprot
Match: A0A0K1QEA1_9DELT (PNPLA domain-containing protein n=2 Tax=Labilithrix luteola TaxID=1391654 RepID=A0A0K1QEA1_9DELT) HSP 1 Score: 145 bits (365), Expect = 5.170e-36 Identity = 79/169 (46.75%), Postives = 107/169 (63.31%), Query Frame = 2
Query: 1304 SLSAWLTEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTG 1810
+L +L EGPF L+MS GFFGF+AH G + L++EGL+ + A+G+SAG LV L+AAGL + + ++K R DFWDP G+LRG+ FE I+ LP R F+ RIP+A+S FDV +T LD G + A+RA+C P LF PVW R +DGG+ D G
Sbjct: 2 TLREYLLEGPFALTMSSGFFGFFAHTGFMTVLEDEGLVP--TRASGSSAGALVGSLWAAGLDAPTIADELLKLERRDFWDPGLGAGVLRGRLFEGILDRVLPR--RTFETCRIPVALSVFDVLTRSTHVLDAGDLPSAIRASCAVPFLFHPVWIRRRPYLDGGILDRPG 166
BLAST of mRNA_Ecto-sp13_S_contig93.20891.1 vs. uniprot
Match: A0A1J5D3W5_9DELT (Patatin n=2 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A1J5D3W5_9DELT) HSP 1 Score: 144 bits (362), Expect = 1.600e-35 Identity = 81/169 (47.93%), Postives = 104/169 (61.54%), Query Frame = 2
Query: 1304 SLSAWLTEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTG 1810
SL WL E PF LS+S GFFGF+AH G L L++EGLL GASAGGLVAG +A G+S + + +R DFWDP GLLRG+ F+ +++ L +RF+ R LAVS FDV TTR +++G +A +RATC P LF PVW ++DGGV D G
Sbjct: 5 SLREWLREEPFTLSLSAGFFGFFAHCGMLSVLEDEGLLPRRL--CGASAGGLVAGAWAGGVSSEVFRDRLFSLQRRDFWDPSPGFGLLRGRLFDRLLREMLV--AQRFEDCRAELAVSVFDVWTRTTRVVNDGDLANGIRATCALPFLFQPVWLRGRPVLDGGVLDRPG 169
BLAST of mRNA_Ecto-sp13_S_contig93.20891.1 vs. uniprot
Match: A0A2D5QR51_9DELT (Patatin n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2D5QR51_9DELT) HSP 1 Score: 143 bits (361), Expect = 4.550e-35 Identity = 78/170 (45.88%), Postives = 110/170 (64.71%), Query Frame = 2
Query: 1304 SLSAWLTEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFG-GLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTG 1810
+L WL + PF L++S GFFGF+AH G + AL+ EGL + G+SAG LV+ L+A+GLS T++ +++ +R DFWDP G G GLL+GK FE+ +K L F+ IP+ +SAFD RL + ++G + A+RA+CTFPGLF P W D +DGGV D +G
Sbjct: 23 TLRTWLNQAPFSLALSSGFFGFFAHAGVVSALEMEGLKPQRLM--GSSAGALVSALWASGLSSTEIRSELLQLKREDFWDP-GLGLGLLKGKLFEERLKDLLR--CHSFEHCVIPVQMSAFDCFRLKAQLFNQGDLVSAIRASCTFPGLFHPRWIDGKPYIDGGVTDRSG 187
BLAST of mRNA_Ecto-sp13_S_contig93.20891.1 vs. uniprot
Match: A0A363UKP4_9GAMM (Patatin n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A363UKP4_9GAMM) HSP 1 Score: 142 bits (358), Expect = 7.130e-35 Identity = 75/172 (43.60%), Postives = 111/172 (64.53%), Query Frame = 2
Query: 1295 SPRSLSAWLTEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTG 1810
SP +L+ WL PF L++S GFFGF+AH G + AL L + + +G+SAG L+ +AAGLSP+ + E ++ ++DFWDP GL+RGK+FE +++ LP V+R + R+PLA+S +DV TR L +G +A+A+RA+C P +F PVW +DGGV+D G
Sbjct: 9 SPPTLADWLALEPFGLTLSSGFFGFFAHAGVVQALAERKL--QPASLSGSSAGALIGASWAAGLSPSAIAERLLVLDKTDFWDPFPGAGLIRGKRFERLLESWLP--VQRLEDCRVPLALSVYDVFARKTRVLTQGPLARAVRASCAVPLMFHPVWIRGRAYLDGGVQDRPG 176
BLAST of mRNA_Ecto-sp13_S_contig93.20891.1 vs. uniprot
Match: A0A850BBZ6_9DELT (Patatin-like phospholipase family protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A850BBZ6_9DELT) HSP 1 Score: 142 bits (357), Expect = 9.320e-35 Identity = 78/170 (45.88%), Postives = 105/170 (61.76%), Query Frame = 2
Query: 1304 SLSAWLTEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFG-GLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTG 1810
+L WL E PF L +S GFFGF+AH G + L+ EGLL + G+SAG LVAG +AAG+S TD+ + ++ +R FWDP GFG GLLRG+ F + LP + FD+ R P+A+S +DV + TR L G + A+ A+C P LF P W D L+DGG+ D G
Sbjct: 6 TLREWLRERPFALGLSSGFFGFFAHTGVMTVLEEEGLLP--ARLAGSSAGALVAGAWAAGVSATDLRDELLALKREHFWDP-GFGLGLLRGELFRQKLGALLP--AQTFDECRAPVAISVYDVLQARTRVLTAGRLVHAICASCAVPLLFQPAWVDGRPLLDGGILDRPG 170 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig93.20891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig93.20891.1 >prot_Ecto-sp13_S_contig93.20891.1 ID=prot_Ecto-sp13_S_contig93.20891.1|Name=mRNA_Ecto-sp13_S_contig93.20891.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=428bp MGSSLVRETRMLNRKEPFGAWSLPQSTKIRPYYADIAIIVRDFVGLDDRDback to top mRNA from alignment at Ecto-sp13_S_contig93:37799..41324+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig93.20891.1 ID=mRNA_Ecto-sp13_S_contig93.20891.1|Name=mRNA_Ecto-sp13_S_contig93.20891.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3526bp|location=Sequence derived from alignment at Ecto-sp13_S_contig93:37799..41324+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig93:37799..41324+ >mRNA_Ecto-sp13_S_contig93.20891.1 ID=mRNA_Ecto-sp13_S_contig93.20891.1|Name=mRNA_Ecto-sp13_S_contig93.20891.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1284bp|location=Sequence derived from alignment at Ecto-sp13_S_contig93:37799..41324+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |