mRNA_Ecto-sp13_S_contig927.20860.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig927.20860.1 vs. uniprot
Match: D8LIP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP6_ECTSI) HSP 1 Score: 726 bits (1873), Expect = 4.650e-245 Identity = 480/590 (81.36%), Postives = 492/590 (83.39%), Query Frame = 1
Query: 796 MSWLLNISAYVSTIDWEWFGVQTALFKDPNYWAVTIFGVLGVLMRDVAWKGYHRWWNPKLHHVLVEMEKGHLEDIDLPRSLRRSYSLHQVIQEDTSTRVSKMRTQSIRRMEDHRDAVIQALGASGSGAGRNYQAASPDMAPDASARARRSLDAVVIEGGRPRSAGGRLTSISSMLEGLSRSPMSSQLSTTGSNRRGRSAGSSPILPGMTNAFSDSSALPSGGGRGEGVVVRYRSSGDLSLMGREGSSGGGGRG---GTAGAKAGFAFSHDEAASHRQIEMIMRNRPAHTRRRSMQPASKLPPIDDSFRAHLRALKAHKAAIVADTNTDESNADARGGQVAASSRVSGHDNSAGSSRSFSLADSSFDE-DGEVGGLAVVHEHGGDHATAIVPPAVSAAAGAKDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAASVGDVDGATGDTARQSDDGEEQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGVSGKEQQSKRISLRDVLSSLLSGNGTAGAGGHXXXXXXXXXXXXXXXXXPAAVLEPPDESE 2553
MSWLLNIS YVSTIDWEWFGVQTALFKDPNYWAVT+FGV+GVLMRDVAWKGYHRWWNPKLHHVLVEMEKGHLEDIDLPRSLRRSYSLHQV+QEDTSTRVSKMRTQSI+RMEDHRDAVIQALGASGSGAGRNYQAASPDMAPDASARAR SLDAVV EGGRPRSAGGRLTSISSMLEGLSRSPMS+QLSTTGSNRRGRSAGSSPILPGM NAFS+SSALP GGGRGEGVVVRYRSSGDLSLMGREG GTAGAKAGFAFSHDEAASHRQIEMIMRNRP+HTRRRSMQPASKLPPIDDSF+AHLRALKAHKAAIVADTN A ARG VAAS RVSGHDNSAGSSRSFS+ADSSFDE DGEVGGLAVV E GGD ATAI P A +AAA A+ XXXXXXXXXXXXXXXXX AASVGDVDGATGDTAR+S DGEEQP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G SGKEQQSKRISLRDVLSSLLSGNGTAGAGGH PAAVLEPPDESE
Sbjct: 1 MSWLLNISVYVSTIDWEWFGVQTALFKDPNYWAVTMFGVIGVLMRDVAWKGYHRWWNPKLHHVLVEMEKGHLEDIDLPRSLRRSYSLHQVVQEDTSTRVSKMRTQSIQRMEDHRDAVIQALGASGSGAGRNYQAASPDMAPDASARARGSLDAVVNEGGRPRSAGGRLTSISSMLEGLSRSPMSTQLSTTGSNRRGRSAGSSPILPGMMNAFSESSALPGGGGRGEGVVVRYRSSGDLSLMGREGGXXXXXXXXXXGTAGAKAGFAFSHDEAASHRQIEMIMRNRPSHTRRRSMQPASKLPPIDDSFQAHLRALKAHKAAIVADTN-----AGARGEHVAASGRVSGHDNSAGSSRSFSMADSSFDEEDGEVGGLAVVQEDGGDDATAIAPAAAAAAASAEX----------------------------------------XXXXXXXXXXXXXXXXXXXAASVGDVDGATGDTARESGDGEEQPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASGKEQQSKRISLRDVLSSLLSGNGTAGAGGHISGSDGDGGNRRESTSSPAAVLEPPDESE 545
BLAST of mRNA_Ecto-sp13_S_contig927.20860.1 vs. uniprot
Match: A0A7S4DCU9_HETAK (Phospholipid-transporting ATPase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCU9_HETAK) HSP 1 Score: 297 bits (760), Expect = 6.020e-84 Identity = 151/335 (45.07%), Postives = 217/335 (64.78%), Query Frame = 1
Query: 34 VCQAFVGCRMSPDQKRQLVHLIKDNNPDARTLAVGDGANDVPMIQAAHVGVGISGQEGLQAVNASDYSLAQFRFLQKLLLCHGRFNYRRMSFATSYLFYKSVSWAVPLFVYAFFNGLSGQFFYDWVNSMLWALLYTGLPIVLLGVYDMDVLPSTALRYPWLYRNGVDDELLTKKFFWGWIAQGVLEACWVTIPLIFLQMGGPVFKGETPSVLGFGHTAFQSMTLVVNMKLLFVQRRWHWVEAALLTVSTALLFIMSWLLNISAYVSTIDWEWFGVQTALFKDPNYWAVTIFGVLGVLMRDVAWKGYHRWWNPKLHHVLVEMEKGHLEDIDLPRSL 1038
+C+A V CR+SPDQKR++V L+KDN P R LA+GDGANDV MIQ AHVGVGISGQEGLQAVN+SDY++AQF++L+KLLL HGR+NYRRMS Y+FYK++ ++P+F +AF G GQ FY V + L YT LPI+L+G+YD D+ ALR+P LY G+ D T K FW W+A + EA V + +FL G F S G T F ++ ++VN+KL+F Q W+W+ ++ +S AL F++ W+ N + +D++ + K YW + + + +MRD+ WKGY+RW++P HH++ E++ D+ +P+ L
Sbjct: 213 LCRAVVACRVSPDQKREMVALVKDNVPGVRALAIGDGANDVAMIQEAHVGVGISGQEGLQAVNSSDYAVAQFKYLRKLLLVHGRWNYRRMSKLVCYVFYKNILMSLPMFWFAFAAGFGGQKFYVEVGIQFYNLFYTSLPIILIGIYDRDISADLALRFPSLYFVGIKDTYFTVKIFWVWMASAIWEAATVCVLPLFLS--GNSFDSFWES----GATTFTAVVIMVNLKLIFHQFAWYWIHLFIVLLSCALWFMLGWISN---RLVVVDYDAYYTFDKDLKSHTYWLLVMLLCMIGIMRDLYWKGYNRWFHPSPHHIVEEIDAY---DLPVPKEL 535
BLAST of mRNA_Ecto-sp13_S_contig927.20860.1 vs. uniprot
Match: A0A6H5KPG5_9PHAE (P-type phospholipid transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG5_9PHAE) HSP 1 Score: 307 bits (786), Expect = 4.540e-81 Identity = 157/340 (46.18%), Postives = 217/340 (63.82%), Query Frame = 1
Query: 16 FFKFAGVCQAFVGCRMSPDQKRQLVHLIKDNNPDARTLAVGDGANDVPMIQAAHVGVGISGQEGLQAVNASDYSLAQFRFLQKLLLCHGRFNYRRMSFATSYLFYKSVSWAVPLFVYAFFNGLSGQFFYDWVNSMLWALLYTGLPIVLLGVYDMDVLPSTALRYPWLYRNGVDDELLTKKFFWGWIAQGVLEACWVTIPLIFLQMGGPVFKGETPSVLGFGHTAFQSMTLVVNMKLLFVQRRWHWVEAALLTVSTALLFIMSWLLNISAYVSTIDWEWFGVQTALFKDPNYWAVTIFGVLGVLMRDVAWKGYHRWWNPKLHHVLVEMEKGHLEDIDLPRS 1035
F + A C+A V CR+SPDQKR +V L+++ P+ARTLA+GDGANDV MIQAAH+GVGISGQEG+QAVNASD+++AQFRFLQKL+L HGR NYRRMS +Y FYK++ AVP+ Y NG SGQ FY + +++T PI+ LG +D DV +P LY G++D K FW WI+Q ++EA +T + L GGP G S + +G T F + L+ N K+L++Q RW W A L+ S F + +LNI + +D+++F V L +P +WAV V MRD++WK YHRWW PKLHH+++E+E + + L ++
Sbjct: 990 FAELAMECEAVVCCRVSPDQKRAVVALVRERRPEARTLAIGDGANDVAMIQAAHIGVGISGQEGMQAVNASDFAIAQFRFLQKLMLFHGRQNYRRMSKLVAYTFYKNILMAVPMAWYVVANGYSGQKFYTEGGIQFYNIMFTLWPILFLGCFDRDVSLKDTEDFPQLYVLGINDVFFNAKVFWSWISQAMVEAALITFVPLLLLKGGPGDDGTEVSYMLYGGTTFSLVVLLANSKILWLQYRWTWWAAVLVVASVLAWFGTACVLNI---LHKVDFDFFMVFFHLIVNPTFWAVVTLCFTAVAMRDLSWKFYHRWWQPKLHHLILEVEASRGDPVMLTQT 1326
BLAST of mRNA_Ecto-sp13_S_contig927.20860.1 vs. uniprot
Match: D7FU18_ECTSI (Phospholipid-transporting ATPase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU18_ECTSI) HSP 1 Score: 269 bits (687), Expect = 3.500e-69 Identity = 157/432 (36.34%), Postives = 216/432 (50.00%), Query Frame = 1
Query: 16 FFKFAGVCQAFVGCRMSPDQKRQLVHLIKDNNPDARTLAVGDGANDVPMIQAAHVGVGISGQEGLQ--------------------------------------------------------------------------------------------AVNASDYSLAQFRFLQKLLLCHGRFNYRRMSFATSYLFYKSVSWAVPLFVYAFFNGLSGQFFYDWVNSMLWALLYTGLPIVLLGVYDMDVLPSTALRYPWLYRNGVDDELLTKKFFWGWIAQGVLEACWVTIPLIFLQMGGPVFKGETPSVLGFGHTAFQSMTLVVNMKLLFVQRRWHWVEAALLTVSTALLFIMSWLLNISAYVSTIDWEWFGVQTALFKDPNYWAVTIFGVLGVLMRDVAWKGYHRWWNPKLHHVLVEMEKGHLEDIDLPRS 1035
F + A C+A V CR+SPDQKR +V L+++ P+ARTLA+GDGANDV MIQAAH+GVGISGQEG+Q AVNASD+++AQFRFLQKL+L HGR NYRRMS +Y FYK++ AVP+ Y NG SGQ FY + +++T PI+ LG +D DV +P LY G++D K FW W++Q ++EA +T + L GGP G S + +G T F + L+ N K+L++Q RW W A L+ S F + +LNI + +D+++F V L +P +WAV V MRD++WK YHRWW PKLHH+++E+E + + L S
Sbjct: 1036 FAELAMECEAVVCCRVSPDQKRAVVALVRERRPEARTLAIGDGANDVAMIQAAHIGVGISGQEGMQSVGAQFKNQLNSLLGAIGETHPHYVRCLKPNDENVRSQFDLGRITAQLANGAVAAKARREAALRDKRCRQRGGGIYGRHRPVCCRTLLYVPLAVNASDFAIAQFRFLQKLMLFHGRQNYRRMSKLVAYTFYKNILMAVPMAWYMVVNGYSGQKFYTEGGIQFYNIMFTLWPILFLGCFDRDVSLKDTENFPQLYVLGINDVFFNAKVFWSWMSQAIVEAALITFVPLLLLKGGPADDGAEVSYMFYGGTTFSLVVLLANSKILWLQYRWTWWAAVLVMASVLAWFGTACVLNI---LHKVDFDFFMVFFHLMVNPTFWAVVTLCFTAVAMRDLSWKFYHRWWQPKLHHLILEVEASRGDPVILTDS 1464
BLAST of mRNA_Ecto-sp13_S_contig927.20860.1 vs. uniprot
Match: M4BJ26_HYAAE (Phospholipid-transporting ATPase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BJ26_HYAAE) HSP 1 Score: 252 bits (643), Expect = 4.870e-65 Identity = 142/329 (43.16%), Postives = 195/329 (59.27%), Query Frame = 1
Query: 13 LFFKFAGVCQAFVGCRMSPDQKRQLVHLIKDNNPDARTLAVGDGANDVPMIQAAHVGVGISGQEGLQAVNASDYSLAQFRFLQKLLLCHGRFNYRRMSFATSYLFYKSVSWAVPLFVYAFFNGLSGQ-FFYDWVNSMLWALLYTGLPIVLLGVYDMDVLPSTALRYPWLYRNGVDDELLTKKFFWGWIAQGVLEACWVTIPLIFLQMGGPVFKGETPSVLGFGHTAFQSMTLVVNMKLLFVQRRWHWVEAALLTVSTALLFIMSWLLNISAYVSTIDWEWFGVQTALFKDPNYWAVTIFGVLGVLMRDVAWKGYHRWWNPKLHHVLVEM 996
LF K A C A + CR+SP QK QLV L+++NNP RTLA+GDGANDV MIQAAHVGVGISGQEG+QA N+SDY++AQFRFL +LLL HGR+NY RM Y+FYK+V + F Y + G SGQ FF +W + LL+T LPI+L+ ++ DV A+ YP LYR G ++ K WGWI+ V E+ + ++ M V +G+TP++ +G T+F + +VV +KL Q+ W + A+ S L + ++ VS+ W GV F+ +W V V+ L RD WKGY R + P H+ E+
Sbjct: 455 LFLKVAEKCVAVIACRVSPAQKAQLVRLVRENNPGMRTLAIGDGANDVSMIQAAHVGVGISGQEGMQAANSSDYAIAQFRFLARLLLVHGRWNYVRMGKLILYIFYKNVILNLTQFWYMIYTGYSGQKFFLEW-GLQGYNLLFTALPIILVSTFEQDVPACLAVNYPLLYRIGQENTRFNTKVVWGWISSCVWESLIICFGVVH-GMRYLVTRGDTPTMWVYGSTSFTIVLIVVTLKLCLHQQMWWPIHIAIYITSFMLWIGTAAFISYGESVSSSYWN--GVFANTFRVDAFWLVVPLLVVASLSRDFMWKGYMRMFKPSYKHLAQEV 779
BLAST of mRNA_Ecto-sp13_S_contig927.20860.1 vs. uniprot
Match: H3GP37_PHYRM (Phospholipid-transporting ATPase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GP37_PHYRM) HSP 1 Score: 250 bits (639), Expect = 1.470e-63 Identity = 145/333 (43.54%), Postives = 196/333 (58.86%), Query Frame = 1
Query: 13 LFFKFAGVCQAFVGCRMSPDQKRQLVHLIKDNNPDARTLAVGDGANDVPMIQAAHVGVGISGQEGLQAVNASDYSLAQFRFLQKLLLCHGRFNYRRMSFATSYLFYKSVSWAVPLFVYAFFNGLSGQ-FFYDWVNSMLWALLYTGLPIVLLGVYDMDVLPSTALRYPWLYRNGVDDELLTKKFFWGWIAQGVLEACWVTIPLIFLQMGGPVFKGETPSVLGFGHTAFQSMTLVVNMKLLFVQRRWHWVEAALLTVSTALLFIMSWLLNISAYVSTIDW----EWFGVQTALFKDPNYWAVTIFGVLGVLMRDVAWKGYHRWWNPKLHHVLVEM 996
L K A C A + CR+SP QK QLV L++DNNP+ RTLA+GDGANDV MIQAAHVGVGISGQEG+QA N+SDY++AQFRFL +LLL HGR+NY RM Y+FYK+V + F Y + G SGQ FF +W + LL+T LPIVL+ ++ DV A YP LYR G ++ K W WI V E+ + +++ M V G+TP++ +G T+F + +VV +KL Q+ W + A+ VS M W+ +A++S D W GV + F+ +W V V+ L RD WKGY R + P H+ E+
Sbjct: 924 LLLKVAEKCVAVIACRVSPAQKAQLVRLVRDNNPEIRTLAIGDGANDVSMIQAAHVGVGISGQEGMQAANSSDYAIAQFRFLSRLLLVHGRWNYVRMGKLILYIFYKNVILNLTQFWYMIYTGYSGQKFFLEW-GLQGYNLLFTALPIVLVSTFEQDVPACLAHNYPLLYRIGQENTRFNTKVVWAWITSCVWESLIICFGVVY-GMRYLVTGGDTPTMWVYGCTSFTIVLIVVTLKLCLHQQMWWPIHIAIYFVS-----FMLWI-GTAAFISHGDSISSSYWNGVFSNTFRIDAFWLVVPLLVISALSRDFMWKGYMRMFRPSYKHLAQEV 1248
BLAST of mRNA_Ecto-sp13_S_contig927.20860.1 vs. uniprot
Match: A0A8K1C8B0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8B0_PYTOL) HSP 1 Score: 250 bits (639), Expect = 1.590e-63 Identity = 141/340 (41.47%), Postives = 196/340 (57.65%), Query Frame = 1
Query: 13 LFFKFAGVCQAFVGCRMSPDQKRQLVHLIKDNNPDARTLAVGDGANDVPMIQAAHVGVGISGQEGLQAVNASDYSLAQFRFLQKLLLCHGRFNYRRMSFATSYLFYKSVSWAVPLFVYAFFNGLSGQ-FFYDWVNSMLWALLYTGLPIVLLGVYDMDVLPSTALRYPWLYRNGVDDELLTKKFFWGWIAQGVLEACWVTIPLIFLQMGGPVF---KGETPSVLGFGHTAFQSMTLVVNMKLLFVQRRWHWVEAALLTVSTALLFIMSWLLNISAYVSTIDWEWFGVQTALFKDPNYWAVTIFGVLGVLMRDVAWKGYHRWWNPKLHHVLVEMEKGHLEDI 1020
LF A C A + CR+SP QK +LV L++DNNP RTLA+GDGANDV MIQ+AHVGVGISGQEG+QA N+SDY++AQFRFL ++LL HGR+NY RM Y+FYK+V + F Y F G SGQ FF +W + L++T LPIVL+ ++ DV A YP LYR G ++ K W WI+ W ++ + F + G F GETP++ +G AF + +VV +KL Q+ W + A+ VS L + ++ VS+ W GV T +F +W + V + RD WKGY R ++P H+ E++ + D+
Sbjct: 986 LFLSVALKCVAVIACRVSPAQKAELVRLVRDNNPKVRTLAIGDGANDVSMIQSAHVGVGISGQEGMQAANSSDYAIAQFRFLSRMLLVHGRWNYLRMGKLILYIFYKNVMMNLTQFWYMIFTGFSGQKFFLEW-GLQGYNLIFTALPIVLISTFEQDVPAYYAHNYPVLYRVGQENSRFNTKIVWAWIS----SCAWESLVISFGTIYGLQFLNRTGETPNMWVYGCVAFTIVVIVVTLKLSLHQQMWWRIHLAIYVVSFGLWIATAAFISYGDSVSSAYWN--GVFTNVFATRGFWVLLPLLVFVAISRDYLWKGYVRAFHPSYRHLAQEVDAFGMRDL 1318
BLAST of mRNA_Ecto-sp13_S_contig927.20860.1 vs. uniprot
Match: A0A2P4Y8V4_9STRA (Phospholipid-transporting ATPase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y8V4_9STRA) HSP 1 Score: 241 bits (615), Expect = 2.450e-63 Identity = 141/328 (42.99%), Postives = 192/328 (58.54%), Query Frame = 1
Query: 13 LFFKFAGVCQAFVGCRMSPDQKRQLVHLIKDNNPDARTLAVGDGANDVPMIQAAHVGVGISGQEGLQAVNASDYSLAQFRFLQKLLLCHGRFNYRRMSFATSYLFYKSVSWAVPLFVYAFFNGLSGQFFYDWVNSMLWALLYTGLPIVLLGVYDMDVLPSTALRYPWLYRNGVDDELLTKKFFWGWIAQGVLEACWVTIPLIFLQMGGPVFKGETPSVLGFGHTAFQSMTLVVNMKLLFVQRRWHWVEAALLTVSTALLFIMSWLLNISAYVSTIDWEWFGVQTALFKDPNYWAVTIFGVLGVLMRDVAWKGYHRWWNPKLHHVLVEM 996
L K A C A + CR+SP QK QLV L++DNNP RTLA+GDGANDV MIQAAHVGVGISGQEG+QA N+SDY++AQFRFL +LLL HGR+NY RM Y+FYK+V + F Y + G SGQ FY + LL+T LPIVL+ ++ DV A YP LYR G ++ K W WI+ + E+ + +++ M V G+TP++ +G T+F + +VV +KL Q+ W W ++ + + +L+I + IS S W GV + F +W V V+ L RD WKGY R + P H+ E+
Sbjct: 261 LLLKVAEKCVAVIACRVSPAQKAQLVRLVRDNNPKIRTLAIGDGANDVSMIQAAHVGVGISGQEGMQAANSSDYAIAQFRFLSRLLLVHGRWNYVRMGKLILYIFYKNVILNLTQFWYMIYTGYSGQKFYLEWGLQGYNLLFTALPIVLVSTFEQDVPACLAHNYPLLYRIGQENTRFNTKVVWAWISSCMWESLIICFGVVY-GMRYLVPGGDTPTMWVYGCTSFTIVLIVVTLKLCLHQQMW-WPIHIVIYIGSFMLWIGT-AAFISHGKSISSSYWNGVFSNTFHIDVFWLVVPLLVVASLSRDFMWKGYMRMFRPSYKHLAQEV 585
BLAST of mRNA_Ecto-sp13_S_contig927.20860.1 vs. uniprot
Match: A0A662WRZ8_9STRA (Phospholipid-transporting ATPase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WRZ8_9STRA) HSP 1 Score: 249 bits (637), Expect = 2.580e-63 Identity = 144/329 (43.77%), Postives = 194/329 (58.97%), Query Frame = 1
Query: 13 LFFKFAGVCQAFVGCRMSPDQKRQLVHLIKDNNPDARTLAVGDGANDVPMIQAAHVGVGISGQEGLQAVNASDYSLAQFRFLQKLLLCHGRFNYRRMSFATSYLFYKSVSWAVPLFVYAFFNGLSGQ-FFYDWVNSMLWALLYTGLPIVLLGVYDMDVLPSTALRYPWLYRNGVDDELLTKKFFWGWIAQGVLEACWVTIPLIFLQMGGPVFKGETPSVLGFGHTAFQSMTLVVNMKLLFVQRRWHWVEAALLTVSTALLFIMSWLLNISAYVSTIDWEWFGVQTALFKDPNYWAVTIFGVLGVLMRDVAWKGYHRWWNPKLHHVLVEM 996
L A C A + CR+SP QK QLV L++DNNP+ RTLA+GDGANDV MIQAAHVGVGISGQEG+QA N+SDY++AQFRFL +LLL HGR+NY RM Y+FYK+V + F Y F G SGQ FF +W + LL+T LPIVL+ ++ DV A YP LYR G ++ K W W+ V E+ + + +++ M V GETP++ +G T+F + +VV +KL Q+ W V A+ VS +L + ++ +S+ W GV T F+ +W V V L RD WKGY R + P H+ E+
Sbjct: 938 LLLSVAEKCVAVIACRVSPAQKAQLVRLVRDNNPEIRTLAIGDGANDVSMIQAAHVGVGISGQEGMQAANSSDYAMAQFRFLSRLLLVHGRWNYVRMGKLILYIFYKNVILNLTQFWYMIFTGYSGQKFFLEW-GLQGYNLLFTALPIVLVSTFEQDVPACLAHNYPLLYRIGQENTRFNTKVVWAWMTSCVWESLVICLGVVY-GMRYLVSGGETPTMWVYGCTSFTIVLVVVTLKLCLHQQMWWPVHIAIYVVSFSLWLGTAAFISHGKSISSAYWN--GVFTNTFRIDAFWLVLPIIVFVALSRDFFWKGYIRTFTPSYKHLAQEV 1262
BLAST of mRNA_Ecto-sp13_S_contig927.20860.1 vs. uniprot
Match: A0A0P1AK28_PLAHL (Phospholipid-transporting ATPase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AK28_PLAHL) HSP 1 Score: 249 bits (635), Expect = 4.100e-63 Identity = 142/330 (43.03%), Postives = 198/330 (60.00%), Query Frame = 1
Query: 13 LFFKFAGVCQAFVGCRMSPDQKRQLVHLIKDNNPDARTLAVGDGANDVPMIQAAHVGVGISGQEGLQAVNASDYSLAQFRFLQKLLLCHGRFNYRRMSFATSYLFYKSVSWAVPLFVYAFFNGLSGQ-FFYDWVNSMLWALLYTGLPIVLLGVYDMDVLPSTALRYPWLYRNGVDDELLTKKFFWGWIAQGVLEACWVTIPLIFLQMGGPVFKGETPSVLGFGHTAFQSMTLVVNMKLLFVQRRWHWVEAALLTVSTALLFI-MSWLLNISAYVSTIDWEWFGVQTALFKDPNYWAVTIFGVLGVLMRDVAWKGYHRWWNPKLHHVLVEM 996
L K A C A + CR+SP QK QLV L++DN P+ RTLA+GDGANDV MIQAAHVGVGISGQEG+QA N+SDY++AQFRFL +LLL HGR+NY RM Y+FYK+V + F Y + G SGQ FF +W + LL+T LPI+L+ ++ DV A YP LYR G ++ K W WI V E+ + +++ M V K +TP++ +G T+F + +VV +KL Q+ W W ++ +S+ +L+I + L++ +S+ W GV T F+ +W V V+ L RD WKGY R + P H+ E+
Sbjct: 912 LLLKVAEKCVAVIACRVSPAQKAQLVRLVRDNKPEIRTLAIGDGANDVSMIQAAHVGVGISGQEGMQAANSSDYAIAQFRFLSRLLLVHGRWNYVRMGKLILYIFYKNVILNLTQFWYMIYTGYSGQKFFLEW-GLQGYNLLFTALPIILVSTFEQDVPACLAHNYPLLYRIGQENTRFNTKVVWAWITSCVWESLIICFGVVY-GMRYLVTKADTPTMWVYGSTSFTIVLIVVTLKLCLHQQMW-WPIHIVIYISSFMLWIGTAALISYGDSISSSYWN--GVFTNTFRVDAFWLVVPLLVVAALSRDFMWKGYMRMFRPSYKHLAQEV 1236 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig927.20860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig927.20860.1 >prot_Ecto-sp13_S_contig927.20860.1 ID=prot_Ecto-sp13_S_contig927.20860.1|Name=mRNA_Ecto-sp13_S_contig927.20860.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=832bp MSPDQKRQLVHLIKDNNPDARTLAVGDGANDVPMIQAAHVGVGISGQEGLback to top mRNA from alignment at Ecto-sp13_S_contig927:291..11179+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig927.20860.1 ID=mRNA_Ecto-sp13_S_contig927.20860.1|Name=mRNA_Ecto-sp13_S_contig927.20860.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10889bp|location=Sequence derived from alignment at Ecto-sp13_S_contig927:291..11179+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig927:291..11179+ >mRNA_Ecto-sp13_S_contig927.20860.1 ID=mRNA_Ecto-sp13_S_contig927.20860.1|Name=mRNA_Ecto-sp13_S_contig927.20860.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2496bp|location=Sequence derived from alignment at Ecto-sp13_S_contig927:291..11179+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |