prot_Ecto-sp13_S_contig92666.20855.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig92666.20855.1
Unique Nameprot_Ecto-sp13_S_contig92666.20855.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length41
Homology
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BLAST of mRNA_Ecto-sp13_S_contig92666.20855.1 vs. uniprot
Match: D8LUC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUC2_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 2.960e-20
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0 
Query:    1 MNTLAADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAY 41
            MNTLAADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAY
Sbjct:  159 MNTLAADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAY 199
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig92666.20855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LUC2_ECTSI2.960e-20100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023222PsbQ-like domain superfamilyGENE3D1.20.120.290coord: 1..41
e-value: 1.3E-5
score: 26.9
IPR023222PsbQ-like domain superfamilySUPERFAMILY101112Oxygen-evolving enhancer protein 3,coord: 4..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig92666contigEcto-sp13_S_contig92666:14..136 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig92666.20855.1mRNA_Ecto-sp13_S_contig92666.20855.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig92666 14..163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig92666.20855.1 ID=prot_Ecto-sp13_S_contig92666.20855.1|Name=mRNA_Ecto-sp13_S_contig92666.20855.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=41bp
MNTLAADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023222PsbQ-like_dom_sf