prot_Ecto-sp13_S_contig9247.20831.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9247.20831.1
Unique Nameprot_Ecto-sp13_S_contig9247.20831.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length332
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9247.20831.1 vs. uniprot
Match: D7FIZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIZ1_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 2.210e-128
Identity = 266/333 (79.88%), Postives = 272/333 (81.68%), Query Frame = 0 
Query:    1 MGTQDFARRDVGDSEGSVVVSRDSSAEEATAGAAQSIGAAPVPSLPWGRVAPSPDSSQPLPGPWGRLQEVMDEIKVMSPASPSSRVPHPFLSGARPSSTPAAEERKGFARPSSPLPISTRGRIAGSSSXXXXXXXXXXSRIADSRQQLXXXXXXXXXXXXXXXXXXXXXXXLVPRSLSPSSSPRQVTSPPTPAASATNTPCETPTTAVQQPVAPASRLPPSRHLAAVEEQSQRSASSPRASAAAADSNEPGVDTKQEREEETPPVPVPGWALGYSSSP-FSSAATGTRGAGGEVAATAAPTAAAAAGRDSGAAPVRTAGHDFSDQAGEVLEDL 332
            MGTQDFARR+VGDSE SV VSRDSSAEE TA AA SI AAP PSLPWGRVAPSPDSSQPLPGPWGRLQEVMDEIKVMSPASP+SRVPHPFLSGARPSST AAEERKGFAR SSPLP+ TRGRIAGSSSXXXXXXX    RIADSRQ  XXXXXXXXXXXXXXXXX        PRSLSPSSSPRQVTSPPTPAA A NTPCETP TAVQQPVAPAS LP S+HLAAVE                AD+NEPGV TKQEREEETPPVPVPG ALGYS+SP FSSAATGTRGAGGEVAATAAP        DSGAAPV TA H FSDQAGE  EDL
Sbjct:    1 MGTQDFARRNVGDSEDSVAVSRDSSAEEVTAEAAHSISAAPAPSLPWGRVAPSPDSSQPLPGPWGRLQEVMDEIKVMSPASPTSRVPHPFLSGARPSSTAAAEERKGFARTSSPLPMPTRGRIAGSSSXXXXXXX----RIADSRQXXXXXXXXXXXXXXXXXXX--------PRSLSPSSSPRQVTSPPTPAALAANTPCETPPTAVQQPVAPASSLPSSQHLAAVEXXXXXXXXXXXXXXXXADANEPGVHTKQEREEETPPVPVPGLALGYSTSPPFSSAATGTRGAGGEVAATAAPXXXXXXXSDSGAAPVGTASHGFSDQAGEEPEDL 321
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9247.20831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIZ1_ECTSI2.210e-12879.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 134..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9247contigEcto-sp13_S_contig9247:4809..6434 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9247.20831.1mRNA_Ecto-sp13_S_contig9247.20831.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9247 4809..6434 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9247.20831.1 ID=prot_Ecto-sp13_S_contig9247.20831.1|Name=mRNA_Ecto-sp13_S_contig9247.20831.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=332bp
MGTQDFARRDVGDSEGSVVVSRDSSAEEATAGAAQSIGAAPVPSLPWGRV
APSPDSSQPLPGPWGRLQEVMDEIKVMSPASPSSRVPHPFLSGARPSSTP
AAEERKGFARPSSPLPISTRGRIAGSSSASASASASASSRIADSRQQLQQ
QEEKQQQQQQQQQQQQQQQQQLVPRSLSPSSSPRQVTSPPTPAASATNTP
CETPTTAVQQPVAPASRLPPSRHLAAVEEQSQRSASSPRASAAAADSNEP
GVDTKQEREEETPPVPVPGWALGYSSSPFSSAATGTRGAGGEVAATAAPT
AAAAAGRDSGAAPVRTAGHDFSDQAGEVLEDL
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