prot_Ecto-sp13_S_contig91324.20700.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig91324.20700.1
Unique Nameprot_Ecto-sp13_S_contig91324.20700.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length117
Homology
BLAST of mRNA_Ecto-sp13_S_contig91324.20700.1 vs. uniprot
Match: A0A6H5LEZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEZ0_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 6.990e-60
Identity = 109/117 (93.16%), Postives = 110/117 (94.02%), Query Frame = 0
Query:    1 MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKVASAGRGXXXXXXKKATPKAAVARVPRNEKEARFPGL 117
            MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSK ASAGRG      KKATPKA+VARVPRNEKEARFPGL
Sbjct:    1 MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKAASAGRGGVGGGAKKATPKASVARVPRNEKEARFPGL 117          
BLAST of mRNA_Ecto-sp13_S_contig91324.20700.1 vs. uniprot
Match: D8LN25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN25_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 2.360e-57
Identity = 108/117 (92.31%), Postives = 109/117 (93.16%), Query Frame = 0
Query:    1 MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKVASAGRGXXXXXXKKATPKAAVARVPRNEKEARFPGL 117
            MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFP+PAAFRQALSENGAEFPDSLADNLLRIIGAMKPSK ASAGR       KKATPKAAVARVPRNEKEARFPGL
Sbjct:    1 MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPDPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKGASAGRAGGGGA-KKATPKAAVARVPRNEKEARFPGL 116          
BLAST of mRNA_Ecto-sp13_S_contig91324.20700.1 vs. uniprot
Match: A0A835YV72_9STRA (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV72_9STRA)

HSP 1 Score: 140 bits (352), Expect = 3.660e-36
Identity = 78/117 (66.67%), Postives = 86/117 (73.50%), Query Frame = 0
Query:    4 SSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKVASAGRGXXXXXXKKATPKAAVA---RVPRNEKEARFPGL 117
            S +DELQRL+L+SKVCTELDNHLGLSDRTLAEFIIHLA EFPEPAAFR AL+ENGAEFP +L DNLLRII  M        G G       +A P  A +   RVPRNE EA+FPGL
Sbjct:    2 SELDELQRLALISKVCTELDNHLGLSDRTLAEFIIHLAAEFPEPAAFRSALAENGAEFPGALCDNLLRIIKLMS-------GDGGGAGSAAEAQPAVAASLQPRVPRNETEAKFPGL 111          
BLAST of mRNA_Ecto-sp13_S_contig91324.20700.1 vs. uniprot
Match: A0A7S2DM33_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DM33_9STRA)

HSP 1 Score: 113 bits (282), Expect = 4.380e-30
Identity = 60/112 (53.57%), Postives = 80/112 (71.43%), Query Frame = 0
Query:    6 IDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKVASAGRGXXXXXXKKATPKAAVARVPRNEKEARFPGL 117
            +DEL  L L+SKVC ELDNHLGLSD+TLAEFI+H+A E      F + L+ENGAEFP +LA+++ R+I AMKPSK +S+G        KK    A++  VPR+E++ +FPGL
Sbjct:    1 MDELVHLQLISKVCNELDNHLGLSDKTLAEFIVHIAGEVKSSTDFNEKLAENGAEFPSALAESIWRLIQAMKPSKASSSG-------IKKDAEPASI--VPRDERDIQFPGL 103          
BLAST of mRNA_Ecto-sp13_S_contig91324.20700.1 vs. uniprot
Match: W7TCI3_9STRA (Atp-dependent rna helicase dhx8 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCI3_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.010e-27
Identity = 59/114 (51.75%), Postives = 75/114 (65.79%), Query Frame = 0
Query:    4 SSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKVASAGRGXXXXXXKKATPKAAVARVPRNEKEARFPGL 117
            +++D+LQ LSLVSK+CTELD+HLGL+D+TLAEFIIHLA+   +  +FR AL ENGAEFP +  D L  +I AM+P +V   GR            +    R  RN KEA FPGL
Sbjct:    2 AALDKLQELSLVSKICTELDSHLGLADKTLAEFIIHLAESHGDAKSFRTALDENGAEFPPTFCDKLFNLIKAMRPHRV---GRKKTYSNGDGGEHEHVEPREARNAKEAAFPGL 112          
BLAST of mRNA_Ecto-sp13_S_contig91324.20700.1 vs. uniprot
Match: A0A7S2RRS8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRS8_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.900e-25
Identity = 61/113 (53.98%), Postives = 75/113 (66.37%), Query Frame = 0
Query:    5 SIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKVASAGRGXXXXXXKKATPKAAVARVPRNEKEARFPGL 117
            ++++L  L LVSKVCTELDNHLGLSD+TLAEFIIHLAD       F   LS NGAEFP +LA++L R+I  MKP     +G G  XXXX      A    VPR++++  FPGL
Sbjct:    1 TMEDLLHLQLVSKVCTELDNHLGLSDKTLAEFIIHLADGVSSATGFEAKLSANGAEFPTALAESLFRLIQQMKPKAGGKSGAGAGXXXXXXXAGPA----VPRDQRDVEFPGL 109          
BLAST of mRNA_Ecto-sp13_S_contig91324.20700.1 vs. uniprot
Match: UPI001D0027B0 (ATP-dependent RNA helicase DHX8-like isoform X1 n=2 Tax=Cotesia glomerata TaxID=32391 RepID=UPI001D0027B0)

HSP 1 Score: 105 bits (262), Expect = 5.000e-24
Identity = 52/80 (65.00%), Postives = 63/80 (78.75%), Query Frame = 0
Query:    1 MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSK 80
            +++  I++L+ LSLVSK+CTEL+NHLGL+D+ LAEFIIHLA E P P  F+QAL ENG E  DS  DNLLRII  MKPSK
Sbjct:    2 VLNDDIEKLEYLSLVSKICTELENHLGLNDKDLAEFIIHLATENPTPNGFKQALRENGGELSDSFMDNLLRIIQHMKPSK 81          
BLAST of mRNA_Ecto-sp13_S_contig91324.20700.1 vs. uniprot
Match: A0A8J5R9Z7_9HYME (Uncharacterized protein n=2 Tax=Cotesia TaxID=32390 RepID=A0A8J5R9Z7_9HYME)

HSP 1 Score: 103 bits (258), Expect = 1.730e-23
Identity = 50/82 (60.98%), Postives = 65/82 (79.27%), Query Frame = 0
Query:    2 VSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKVAS 83
            ++ +I++L+ LSLVSK+CTEL+NHLGL D+ LAEFIIHLA E P P  F+QAL ++G E  DS  DNLLRII  MKPSK+++
Sbjct:    3 LNDAIEKLEYLSLVSKICTELENHLGLDDKDLAEFIIHLATENPTPDGFKQALRDSGGELSDSFMDNLLRIIQHMKPSKISN 84          
BLAST of mRNA_Ecto-sp13_S_contig91324.20700.1 vs. uniprot
Match: T1GM52_MEGSC (RNA helicase n=1 Tax=Megaselia scalaris TaxID=36166 RepID=T1GM52_MEGSC)

HSP 1 Score: 102 bits (253), Expect = 8.170e-23
Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 0
Query:    6 IDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPS 79
            + +L+ LSLVSK+CTELDNHLG++D+ LAEFIIHLADE P    FR+AL  NGAEFPDSL +NLLRII  M+ S
Sbjct:    4 LKQLEYLSLVSKICTELDNHLGINDKDLAEFIIHLADENPALTDFRRALESNGAEFPDSLTENLLRIIKLMRSS 77          
BLAST of mRNA_Ecto-sp13_S_contig91324.20700.1 vs. uniprot
Match: A0A813C684_9DINO (Prp22 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C684_9DINO)

HSP 1 Score: 97.8 bits (242), Expect = 1.170e-22
Identity = 51/83 (61.45%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    2 VSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAFRQALSENGAEFPDSLADNLLRIIGAMKPSKVASA 84
            +SS ++ LQ LSLVSKVC ELD+H+GLSD TLAEFIIHLA E   P +F  A+ ENGA+F DS A +LL  I +M PSK  SA
Sbjct:    1 MSSELERLQHLSLVSKVCQELDDHIGLSDATLAEFIIHLAKEHSTPESFANAVRENGADFGDSFAASLLETIHSMLPSKQGSA 83          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig91324.20700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LEZ0_9PHAE6.990e-6093.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN25_ECTSI2.360e-5792.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YV72_9STRA3.660e-3666.67Putative pre-mRNA-splicing factor ATP-dependent RN... [more]
A0A7S2DM33_9STRA4.380e-3053.57Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
W7TCI3_9STRA2.010e-2751.75Atp-dependent rna helicase dhx8 (Fragment) n=1 Tax... [more]
A0A7S2RRS8_9STRA2.900e-2553.98Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
UPI001D0027B05.000e-2465.00ATP-dependent RNA helicase DHX8-like isoform X1 n=... [more]
A0A8J5R9Z7_9HYME1.730e-2360.98Uncharacterized protein n=2 Tax=Cotesia TaxID=3239... [more]
T1GM52_MEGSC8.170e-2367.57RNA helicase n=1 Tax=Megaselia scalaris TaxID=3616... [more]
A0A813C684_9DINO1.170e-2261.45Prp22 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig91324contigEcto-sp13_S_contig91324:122..472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig91324.20700.1mRNA_Ecto-sp13_S_contig91324.20700.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig91324 122..472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig91324.20700.1 ID=prot_Ecto-sp13_S_contig91324.20700.1|Name=mRNA_Ecto-sp13_S_contig91324.20700.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=117bp
MVSSSIDELQRLSLVSKVCTELDNHLGLSDRTLAEFIIHLADEFPEPAAF
RQALSENGAEFPDSLADNLLRIIGAMKPSKVASAGRGGGGGAAKKATPKA
AVARVPRNEKEARFPGL
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