prot_Ecto-sp13_S_contig90823.20639.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig90823.20639.1
Unique Nameprot_Ecto-sp13_S_contig90823.20639.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length67
Homology
BLAST of mRNA_Ecto-sp13_S_contig90823.20639.1 vs. uniprot
Match: D8LR28_ECTSI (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR28_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 1.480e-36
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0
Query:    1 QVPKFYFGSHFFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRRFPRDRWVRALAHP 67
            +VPKFYFGSHFFRDPPSVREKLIEGLSQSGDTV+PEVMVARRLKIFLEDDLDR FPRDRWVRALAHP
Sbjct:  234 KVPKFYFGSHFFRDPPSVREKLIEGLSQSGDTVMPEVMVARRLKIFLEDDLDRCFPRDRWVRALAHP 300          
BLAST of mRNA_Ecto-sp13_S_contig90823.20639.1 vs. uniprot
Match: A0A6H5KW92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW92_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 1.090e-26
Identity = 58/86 (67.44%), Postives = 60/86 (69.77%), Query Frame = 0
Query:    1 QVPKFYFGSHFFRDPPSVREKLIEGLSQSGDTV-------------------LPEVMVARRLKIFLEDDLDRRFPRDRWVRALAHP 67
            +VPKFYFGSHFFRDP SVR KLIEGLSQ  D V                   LPEV+VARRL IFLEDDLDR FPRDRWVRALAHP
Sbjct:  146 KVPKFYFGSHFFRDPLSVRAKLIEGLSQVSDEVRVFRQVKHFDNMENRAAFVLPEVIVARRLNIFLEDDLDRCFPRDRWVRALAHP 231          
BLAST of mRNA_Ecto-sp13_S_contig90823.20639.1 vs. uniprot
Match: K0SJH0_THAOC (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SJH0_THAOC)

HSP 1 Score: 89.4 bits (220), Expect = 1.520e-19
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    1 QVPKFYFGSHFFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRRFPRDRWVRALAHP 67
            +VPK YFGSH FR P  +R  L+EGLSQSGD  LP V V++RLKIFLED+LD  FPR ++ R +AHP
Sbjct:  221 KVPKDYFGSHLFRKPSVLRGLLVEGLSQSGDVRLPRVTVSKRLKIFLEDELDELFPRSQYERIIAHP 287          
BLAST of mRNA_Ecto-sp13_S_contig90823.20639.1 vs. uniprot
Match: A0A6V2MGD3_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2MGD3_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 6.360e-19
Identity = 41/67 (61.19%), Postives = 48/67 (71.64%), Query Frame = 0
Query:    1 QVPKFYFGSHFFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRRFPRDRWVRALAHP 67
            +VPK YFGSH FR P  +R  LIEGL Q+GD  +P+V V RRLK FLEDDLD  FP D + R +AHP
Sbjct:  284 KVPKDYFGSHLFRKPNELRRHLIEGLCQAGDVKIPKVTVVRRLKPFLEDDLDSMFPLDEYARVIAHP 350          
BLAST of mRNA_Ecto-sp13_S_contig90823.20639.1 vs. uniprot
Match: A0A7S3VD56_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VD56_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 6.870e-19
Identity = 38/67 (56.72%), Postives = 47/67 (70.15%), Query Frame = 0
Query:    1 QVPKFYFGSHFFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRRFPRDRWVRALAHP 67
            +VPK YFGSH FR P  +R  LIEGL Q+ D  +P V + +RLK FLEDDLD  FP++ W R +AHP
Sbjct:  225 KVPKDYFGSHLFRKPIGIRNALIEGLCQAADVQIPSVTIVKRLKPFLEDDLDSMFPKETWARVIAHP 291          
BLAST of mRNA_Ecto-sp13_S_contig90823.20639.1 vs. uniprot
Match: A0A7S2KRF7_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KRF7_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 6.340e-18
Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 0
Query:    1 QVPKFYFGSHFFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRRFPRDRWVRALAHP 67
            +VPK YFGSH FR P  +R  L+EGL+QSGD  LP V V +RLK+F+ED+LD  FP +  VR +AHP
Sbjct:   74 KVPKDYFGSHIFRKPEVLRGLLMEGLAQSGDVRLPNVHVTKRLKVFVEDELDVLFPPEEVVRVIAHP 140          
BLAST of mRNA_Ecto-sp13_S_contig90823.20639.1 vs. uniprot
Match: A0A835YRY5_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRY5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 9.880e-18
Identity = 38/67 (56.72%), Postives = 49/67 (73.13%), Query Frame = 0
Query:    1 QVPKFYFGSHFFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRRFPRDRWVRALAHP 67
            +V K YFGSH  R P ++R KL+EG +QSG TVLP   + RRLKIFLED+L+  +PRD  +R +AHP
Sbjct:  253 KVEKSYFGSHLMRKPEALRAKLVEGCTQSGSTVLPRTTIKRRLKIFLEDELESLYPRDTCLRVIAHP 319          
BLAST of mRNA_Ecto-sp13_S_contig90823.20639.1 vs. uniprot
Match: A0A7S1FT39_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FT39_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.680e-16
Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    1 QVPKFYFGSHFFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRRFP---RDRWVRALAHP 67
            +VPK YFGSH FR    + + L+EGL Q+GD  LPEV VARRLKIFLEDDLD  FP   R    R +AHP
Sbjct:  105 KVPKDYFGSHLFRKEEEITKLLVEGLCQAGDVRLPEVTVARRLKIFLEDDLDDIFPPPERGGPTRVIAHP 174          
BLAST of mRNA_Ecto-sp13_S_contig90823.20639.1 vs. uniprot
Match: A0A7S1BIA7_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIA7_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 4.150e-16
Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    1 QVPKFYFGSHFFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRRFP---RDRWVRALAHP 67
            +VPK YFGSH FR    + + L+EGL Q+GD  LPEV VARRLKIFLEDDLD  FP   R    R +AHP
Sbjct:  214 KVPKDYFGSHLFRKEEEITKLLVEGLCQAGDVRLPEVTVARRLKIFLEDDLDDIFPPPERGGPTRVIAHP 283          
BLAST of mRNA_Ecto-sp13_S_contig90823.20639.1 vs. uniprot
Match: A0A1Z5JKH5_FISSO (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKH5_FISSO)

HSP 1 Score: 78.6 bits (192), Expect = 8.740e-16
Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 0
Query:    1 QVPKFYFGSHFFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDDLDRRFPRDRWVRALAHP 67
            +VPK YFGSH FR P  + E+LIEGL QSGDT LP+V V + L  F++D LD  FP     R +AHP
Sbjct:  158 KVPKDYFGSHLFRKPELLTERLIEGLCQSGDTKLPQVTVVKNLSQFMDDTLDELFPLHSHARVIAHP 224          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig90823.20639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR28_ECTSI1.480e-3695.5216S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A6H5KW92_9PHAE1.090e-2667.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K0SJH0_THAOC1.520e-1962.6916S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A6V2MGD3_9STRA6.360e-1961.1916S rRNA (uracil(1498)-N(3))-methyltransferase n=2... [more]
A0A7S3VD56_9STRA6.870e-1956.7216S rRNA (uracil(1498)-N(3))-methyltransferase (Fr... [more]
A0A7S2KRF7_9STRA6.340e-1858.2116S rRNA (uracil(1498)-N(3))-methyltransferase (Fr... [more]
A0A835YRY5_9STRA9.880e-1856.7216S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A7S1FT39_9STRA1.680e-1660.0016S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A7S1BIA7_9STRA4.150e-1660.0016S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A1Z5JKH5_FISSO8.740e-1655.2216S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig90823contigEcto-sp13_S_contig90823:1..488 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig90823.20639.1mRNA_Ecto-sp13_S_contig90823.20639.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig90823 1..488 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig90823.20639.1 ID=prot_Ecto-sp13_S_contig90823.20639.1|Name=mRNA_Ecto-sp13_S_contig90823.20639.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=67bp
QVPKFYFGSHFFRDPPSVREKLIEGLSQSGDTVLPEVMVARRLKIFLEDD
LDRRFPRDRWVRALAHP
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