mRNA_Ecto-sp13_S_contig9053.20608.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 222 bits (566), Expect = 1.740e-64 Identity = 116/167 (69.46%), Postives = 130/167 (77.84%), Query Frame = 1
Query: 10 GRSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSAIRQRSGSK--RWQMNSSTANLGSMFWLQR-LKWMVFELDTPVSMAPWPASLRQLSFGDHFNQ 501
GRS CL AFIVALNQ C+G ++RWYASTLELQLVSLE CGACRRVP LHVRV R+TPRSLWSPC+SH S E C+S+RVPAV A GLTWAL ME+LLQ+SA+ RS SK R NSSTA+LGSMFWLQ LK +VF+ D P S A WPASL QL FGD F+Q
Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPASTASWPASLPQLLFGDRFDQ 179
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 210 bits (534), Expect = 6.680e-57 Identity = 111/174 (63.79%), Postives = 128/174 (73.56%), Query Frame = 1
Query: 1 TIIGRSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSAIRQRSGS--KRWQMNSSTANLGSMFWLQRLKWMVFELDTPVSMAPWPASLRQLSFGDHFNQSITEV 516
T G S+CLDAF+VALNQACDG ++RWY STLELQLVSLEVCGACRRV LHVRV+ +TP SLW P Q+H + S + C+SSRVP V AFGLTWALPM +L Q SA RSGS +R +SS A+L S W QRLK MVFE D V+ A WPASL+QLSFG FNQ+I V
Sbjct: 2 TTKGNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVNTASWPASLQQLSFGCGFNQAIVGV 175
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 169 bits (429), Expect = 4.690e-43 Identity = 92/169 (54.44%), Postives = 111/169 (65.68%), Query Frame = 1
Query: 7 IGRSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSA--IRQRSGSKRWQMNSSTANLGSMFWLQRLKWMVFELDTPVSMAPWPASLRQLSFGDHFNQSI 507
+GRS CLDAFIVAL QA DG +RWY STLELQLVSLE CGACR V++ R+TP SLWSP +SH S E C+ SRVPAV A G WALPMEILL SA + Q S +++ SS + G M W Q+L ++F + V+ WPA L++LSFGD FNQ I
Sbjct: 24 LGRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYSERSVNSVSWPACLQELSFGDFFNQPI 192
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE) HSP 1 Score: 160 bits (406), Expect = 4.480e-42 Identity = 92/166 (55.42%), Postives = 107/166 (64.46%), Query Frame = 1
Query: 10 GRSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSAIRQRSGSK--RWQMNSSTANLGSMFWLQRLKWMVFELDTPVSMAPWPASLRQLSFGDHFNQ 501
GR C+DAFIVALN+ CDGG++RWYASTLELQ VSLE C ACRRVP H + + SG SR P V A+ LTWAL M++LLQS A+ + GSK R +SS ANL SM WLQRLK +V ELDTPV A WPASL+QLSFG FN+
Sbjct: 15 GRGECVDAFIVALNRTCDGGEQRWYASTLELQPVSLEFCVACRRVPTSH---------------STSTVGRLVSGV----SRAPVVRAYSLTWALSMDVLLQSCAMELQRGSKYRRSGGHSSAANLASMLWLQRLKRLVLELDTPVITASWPASLQQLSFGYKFNK 161
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 138 bits (347), Expect = 1.840e-32 Identity = 80/166 (48.19%), Postives = 104/166 (62.65%), Query Frame = 1
Query: 19 RCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILL--QSSAIRQRSGSKRWQMNSSTANLGSMFWLQRLKWMVFELDT---PVSMAPWPASLRQLSFGDHFNQ 501
RCLDAF+VAL+Q +GG++RWY STL+LQL SLE CGACR P+LHV V TP +LWS Q++ A S+RVPAV A GLTWA P E L SS + R S + Q++ TANL S+ W Q L+ +V + P+ M WP+SL+ L+F F+Q
Sbjct: 8 RCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLGQANPTAGT-------STRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVMDCTVFIIPLEMMSWPSSLKSLTFAGIFDQ 166
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: A0A6H5L3M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M5_9PHAE) HSP 1 Score: 138 bits (347), Expect = 6.050e-32 Identity = 79/168 (47.02%), Postives = 103/168 (61.31%), Query Frame = 1
Query: 22 CLDAFIVALN-QACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSAIRQRSGSKRWQMNS-STANLGSMFWLQRLKWMVFELDTPVSMAPWPASLRQLSFGDHFNQSITEVV 519
CLDAF+ LN Q+C GK+RWY S ELQLVSL+ CG CR +L VRV P SLWSP +S A + +RVPAV A+G TW++P++ LL+ +R + ++ + S A L S+ W Q LK + F+LDT V A WPASL+ L+FG FNQ I VV
Sbjct: 103 CLDAFVAVLNHQSCVEGKKRWYTSIRELQLVSLKFCGVCRSTSILRVRVEHNAPPSLWSPTKSFSYALPDAW-----NRVPAVRAYGWTWSIPVDTLLKVCDLRYWAKAELSRRGSFPEAKLASVVWPQGLKQLEFDLDTAVEKASWPASLQSLTFGCSFNQPILGVV 265
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 135 bits (341), Expect = 8.690e-31 Identity = 73/148 (49.32%), Postives = 102/148 (68.92%), Query Frame = 1
Query: 13 RSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSAIRQRSGSKRWQM--NSSTANLGS-MFWLQRLKWMVFELDTPVSM 447
R+RCLDAF++AL+QAC+GG++RWYASTLELQL SL++C ACR +LHV V +TPRSLWS + R + S +SSRVP V A LTWAL ME LL+ +AI + S+R ++ +S ++LGS + W + L +V D+ ++M
Sbjct: 8 RTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIAM 155
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 125 bits (314), Expect = 1.600e-30 Identity = 70/148 (47.30%), Postives = 90/148 (60.81%), Query Frame = 1
Query: 10 GRSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSAIRQRSGSKRWQMNSS--TANLGSMFWLQRLKWMVFELDTPVSM 447
G +R DAF +AL+QAC+GG++RWY ST ELQL SL++C ACR P LHVRV TP SLWSP + S + + SRVP V A LTWA ME L+Q +AI S S+R +M A+LGS+ W L +V + D + M
Sbjct: 5 GYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDFHIPM 152
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 127 bits (320), Expect = 2.000e-30 Identity = 73/151 (48.34%), Postives = 90/151 (59.60%), Query Frame = 1
Query: 10 GRSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVLHVRVRRRTPRSLWSPCQSHKRADMHSGEGCMSSRVPAVHAFGLTWALPMEILLQSSAIRQRSGSKRWQMN--SSTANLGSMFWLQRLKWMVFELDTPVSMAPW 456
G LD IVALNQACDG ++RWY STLELQLVSLE+CGACR +LHV VR TP +LWS S S E C S+RVPAV A TWALPM+ L Q +A + ++R + S A++ S+ W + LK +VF P W
Sbjct: 85 GGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLVFSRRMPGKAVWW 235
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Match: D7G3G1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G1_ECTSI) HSP 1 Score: 114 bits (286), Expect = 9.490e-28 Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 3
Query: 9 RTKQVPGRLHRGLEPSLRWRKKALVCVYAGATACVAGGLWGMQTCPGLARACPSTNAS 182
RTKQVPGRLHR LEPSLRWRKKALVC YAGAT CVAGGLWGMQ CPGLARACPSTNAS
Sbjct: 6 RTKQVPGRLHRRLEPSLRWRKKALVCFYAGATTCVAGGLWGMQKCPGLARACPSTNAS 63 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9053.20608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9053.20608.1 >prot_Ecto-sp13_S_contig9053.20608.1 ID=prot_Ecto-sp13_S_contig9053.20608.1|Name=mRNA_Ecto-sp13_S_contig9053.20608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=470bp TIIGRSRCLDAFIVALNQACDGGKRRWYASTLELQLVSLEVCGACRRVPVback to top mRNA from alignment at Ecto-sp13_S_contig9053:4016..5425+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9053.20608.1 ID=mRNA_Ecto-sp13_S_contig9053.20608.1|Name=mRNA_Ecto-sp13_S_contig9053.20608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1410bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9053:4016..5425+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9053:4016..5425+ >mRNA_Ecto-sp13_S_contig9053.20608.1 ID=mRNA_Ecto-sp13_S_contig9053.20608.1|Name=mRNA_Ecto-sp13_S_contig9053.20608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1410bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9053:4016..5425+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |