mRNA_Ecto-sp13_S_contig9024.20582.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9024.20582.1
Unique NamemRNA_Ecto-sp13_S_contig9024.20582.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9024.20582.1 vs. uniprot
Match: D7G0T8_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T8_ECTSI)

HSP 1 Score: 884 bits (2285), Expect = 1.740e-315
Identity = 476/569 (83.66%), Postives = 494/569 (86.82%), Query Frame = 1
Query:    1 GTEEQHLAKRCSRS-ALLRHPTSTCLQAHFETFVSRTPLPVTMWEDVLQKHSAHHLEQSEDTQLLQVLKNAYEESLIDVEMRAECDPSFTKGFFSVEVVLLTKLLSRGYSLEERVGKSYTSEKDRRLVDFMPVVERLVLHTAANQNPEVDSASPTSSPFSSSASYLSPSPSLPLDPSSSTSPLSYGPXXXXXXXXXXXXXXXIPPAPFGANAVTTKNKGKQRAIIELGSDDEXXXXXYDFSPQPATPTAPKSKPFVDTFGAASSSGGDGESSGTVGGGTDAGELSVGVAASGGAVVGGPGRKFQPSKPAHLGYGGWASTDVTLEGLINSVRAEEKSPMIASKLVHNPTELLKVLENVQHEALMKQPDCLTVQLFEHQRQAT*WMYDQEVLEGGAMQHLWAELHAHPQMPANDDRFCEFRRCWYSPALNQFTVKNPFEAGTKGGLLCDEMGLGKTAATLALHLIHPAQTPSPGVPLDETEWGPITGKQATPMVAPKSTSGATKAPGKVVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYAYHGGY-RKKDPTFLAKFDMVVTTYGIVQV 1701
            G  +  +A R +R  A L  P ++   AHFETFVSRTPLPVT+WEDVLQKH A  LEQ EDTQLLQVLKNAY+ESLIDVEMRAECDPSFTKGFF+VEVVL+TKLLSRGYSLEERVGKSYT EK+ RLVDFMPVVERLVLHTA NQN E DSAS   SP SSSASYLSPSPSLP  PSSSTSP    P         XXXXXXIPPAP GANAVT KNKGKQRAI ELGSDDE     YDF PQPATPTAP S+PFV+TFGAAS+SGGDG SSGTVGGG DA EL VGVAASGGAVVGGPGRKF+PSKPAHLGYGG +STDVTLEGLINSVRAEE+SP I SKLVHNPTELLKVLENVQH AL+KQPDCLTVQLFEHQ QAT WMYDQEVLEGGAMQHLW EL  HPQMPAN DR CEFRRCWYSPALNQFTVKNPF+AGTKGGLLCDEMGLGKTAATLALHLIHP QTPSPGVPLDE EWGPITGKQATPMVAPKSTSG TKAPGKVVS GTLVVCKVSLVGQWVEEAKRLCG ALSIYAYHGGY RKKDP FLAKFDMVVTTYGIVQV
Sbjct:  185 GKVDMAIASRFNRQEASLPTPWASKWTAHFETFVSRTPLPVTIWEDVLQKHGALQLEQPEDTQLLQVLKNAYKESLIDVEMRAECDPSFTKGFFTVEVVLITKLLSRGYSLEERVGKSYTPEKNHRLVDFMPVVERLVLHTAVNQNAEADSASSACSPLSSSASYLSPSPSLPRTPSSSTSP---SPCGSPPALPPXXXXXXIPPAPSGANAVTKKNKGKQRAITELGSDDEEEEGEYDFPPQPATPTAPTSQPFVNTFGAASNSGGDGGSSGTVGGGADASELGVGVAASGGAVVGGPGRKFRPSKPAHLGYGGQSSTDVTLEGLINSVRAEERSPSIVSKLVHNPTELLKVLENVQHGALIKQPDCLTVQLFEHQLQATQWMYDQEVLEGGAMQHLWVELPPHPQMPANHDRSCEFRRCWYSPALNQFTVKNPFKAGTKGGLLCDEMGLGKTAATLALHLIHPPQTPSPGVPLDEKEWGPITGKQATPMVAPKSTSGGTKAPGKVVSTGTLVVCKVSLVGQWVEEAKRLCGSALSIYAYHGGYHRKKDPAFLAKFDMVVTTYGIVQV 750          
BLAST of mRNA_Ecto-sp13_S_contig9024.20582.1 vs. uniprot
Match: A0A6H5KW09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW09_9PHAE)

HSP 1 Score: 374 bits (961), Expect = 1.500e-112
Identity = 186/282 (65.96%), Postives = 219/282 (77.66%), Query Frame = 1
Query:  853 VGVAASGGAVVGGPGRKFQPSKPAHLGYGGWASTDVTLEGLINSVRAEEKSPMIASKLVHNPTELLKVLENVQHEALMKQPDCLTVQLFEHQRQAT*WMYDQEVLEGGAMQHLWAELHAHPQMPANDDRFCEFRRCWYSPALNQFTVKNPFEAGTKGGLLCDEMGLGKTAATLALHLIHPAQTPSPGVPLDETEWGPITGKQATPMVAPKSTSGATKAPGKVVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYAYHGGYRKKDPTFLAKFDMVVTTYGIVQ 1698
             GV+ +G       GR+F PS       GG+AS DV+L GLINSVR EE +  I    +H+P ++L  LEN+QH +L+KQPDCL+V+L+EHQ+Q   WM DQE+LEGG+MQHLWAEL AH   PA+  R  EFRRCW+SP LNQFT  +PF +  KGG+LCDEMGLGKTAATL LHLIHP +TP+PGVPLDE EWGPI GKQA+P+   KS +G T+ PGK VSKGTLVVCKVSLVGQWVEEAKRLCGGALSIY YHGG R+KDP FLAKFD+VVTTYG+VQ
Sbjct:  537 AGVSGAGAGASSVLGREFTPSTKD---MGGYASIDVSLSGLINSVRDEETNSYIEGGQIHHPAKMLLELENLQHRSLVKQPDCLSVELYEHQKQDAQWMMDQEMLEGGSMQHLWAELPAHHLAPADGQRINEFRRCWFSPILNQFTAIDPFASTMKGGILCDEMGLGKTAATLCLHLIHPPKTPAPGVPLDEKEWGPILGKQASPLTDCKSVTGETEEPGKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGNRRKDPAFLAKFDIVVTTYGVVQ 815          
BLAST of mRNA_Ecto-sp13_S_contig9024.20582.1 vs. uniprot
Match: D7G0S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S9_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 8.170e-106
Identity = 179/269 (66.54%), Postives = 211/269 (78.44%), Query Frame = 1
Query:  895 GRKFQPSKPAHLGYGGWASTDVTLEGLINSVRAEEKSPMIASKLVHNPTELLKVLENVQHEALMKQPDCLTVQLFEHQRQAT*WMYDQEVLEGGAMQHLWAELHAHPQMPANDDRFCEFRRCWYSPALNQFTVKNPFEAGTKGGLLCDEMGLGKTAATLALHLIHPAQTPSPGVPLDETEWGPITGKQATPMVAPKSTSGAT-KAPGKVVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYAYHGGYRKKDPTFLAKFDMVVTTYGIVQ 1698
            GR F PS   + GYGG AS DV+L GLI+SVRAEE++  +  + + +P ++L  LEN+QH +L KQPDCLTV L+EHQ+Q   WM DQE+LEGG+MQHLWAEL  H    AN     EFRRCW+SP LNQFT  NPF +  KGG+LCDEMGLGKTAATL LHLIHP +TP+PGVPLDE EWGPI GKQA P+   K+ +  + +APG+ VSKGTLVVCKVSLVGQWVEEAKRLCGGALSIY YHGG R KDP+FL++FDMVVTTYG+VQ
Sbjct:  521 GRAFTPS---NKGYGGRASLDVSLSGLIDSVRAEERNNNVEERRIIHPAKMLLELENLQHRSLAKQPDCLTVDLYEHQKQDAQWMMDQEMLEGGSMQHLWAELPPHHL--ANGRCSHEFRRCWFSPILNQFTTDNPFASTMKGGILCDEMGLGKTAATLCLHLIHPPRTPAPGVPLDEKEWGPILGKQAEPLAYKKAQASVSPEAPGQWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGRSKDPSFLSQFDMVVTTYGVVQ 784          
BLAST of mRNA_Ecto-sp13_S_contig9024.20582.1 vs. uniprot
Match: D7G0T2_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T2_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 6.070e-77
Identity = 193/547 (35.28%), Postives = 241/547 (44.06%), Query Frame = 1
Query:   82 HFETFVSRTPLPVTMWEDVLQKHS--------AHHLEQSEDTQLLQVLKNAYEESLIDVEMRAECDPSFTKGFFSVEVVLLTKLLSRGYSLEERVGKSYTSEKDRRLVDFMPVVERLVLHTAANQNPEVDSASPTSSPFSSSASYLSPSPSLPLDPSSSTSPLSYGPXXXXXXXXXXXXXXXIPPAPFGANAVTTKNKGKQRAIIELGSDDEXXXXXYDFSPQPATPTAPKSKPFVDTFGAASSSGGDGESSGTVGGGTDAGELSVGVAASGGAVVGGPGRKFQPSKPAHLGYGGWASTDVTLEGLINSVRAEEKSPMIASKLVHNPTELLKVLENVQHEALMKQPDCLTVQLFEHQRQAT*WMYDQEVLEGGAMQHLWAELHAHPQMPANDDRFCEFRRCWYSPALNQFTVKNPFEAGTKGGLLCDEMGLGKTAATLALHLIHPAQTPSPGVPLDETEWGPITGKQATPMVAPKSTSGATKAPGKVVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYAYHGGYRKKDPTFLAKFDMVVTTYGIVQ 1698
            +F+ FVS+TP+P ++W    +  S        A  + + ED   L+ ++  YE  L+DVE  A  DP    G F+VEV+LL K+++RG SL  R              D  P+VER +L+                                                                               K+  + E+                       KS+       AA+                       GV+ +G       GR+F PS      YGG+AS DV+L GLINSVR EE +  I    +H+P +                                                             +  R  EFRR W+SP LNQFT  NPF +  KGG+LCDEMGLGKTAATL LHLIHP +TP+PGVPLDE EWGPI GKQA+P+   KS +G  + PGK VSKGTLVVCKVSLVGQWVEEAKRLCGGALSIY YHGG R+KDP FLAKFD+VVTTYG+VQ
Sbjct:  405 YFDRFVSKTPMPRSLWYPTTRVPSYYDRYDSGAVDIAKEEDKAFLEHVRRCYEVDLVDVETEAVFDPVANAGSFTVEVILLRKVITRGTSLAARSP------------DLTPLVERCILNRVH----------------------------------------------------------------------------KRPTLAEI-----------------------KSRHLSSLTAAAA----------------------AGVSGAGAGASSVLGREFTPSTKD---YGGYASVDVSLSGLINSVRDEETNSYIEGGQIHHPAK-------------------------------------------------------------SGQRLNEFRRSWFSPILNQFTAVNPFASTMKGGILCDEMGLGKTAATLCLHLIHPPKTPAPGVPLDEKEWGPILGKQASPLTDRKSVTGEPEEPGKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGNRRKDPAFLAKFDIVVTTYGVVQ 754          
BLAST of mRNA_Ecto-sp13_S_contig9024.20582.1 vs. uniprot
Match: A0A835YWG4_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWG4_9STRA)

HSP 1 Score: 206 bits (523), Expect = 4.580e-53
Identity = 129/272 (47.43%), Postives = 161/272 (59.19%), Query Frame = 1
Query:  928 LGYGGWASTDVTLEGLI-----NSVRAEEK----------SPMIASKLVHNPTELLKVLENVQHEALMKQPDCLTVQLFEHQRQAT*WMYDQEVLEGGAMQHLWAELHAHPQMPANDDRFCEFRRCWYSPALNQFTVKNPFEAGTKGGLLCDEMGLGKTAATLALHLIHPAQTPSPGVPLDETEWGPITGKQATPMVAPKSTSGATKAPGKVVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYAYHGGYRKKDPTFLAKFDMVVTTYGIVQ 1698
            L Y   A++DV+LEGL+     N+   E++            M   +   + T  ++ +EN+ H  L +QP+ LTV L+EHQRQ   WM DQE L  G  QHLWA     PQ P  D++       W+SP LN FT  +P  AG KGG+LCDEMGLGKTA TLALHL++  +T       DE+EWG I  +    +   K  S      G  VSKGTLVVC VSLVGQWVEEA+RLC   LSIY YHGG R KDP  LA++D+VVTTYGI +
Sbjct:  756 LSYDKHANSDVSLEGLLLAARRNAYAIEQRLGLDEQACDFRKMKKPRTFASVTGFMQEIENLGHAPLDQQPEELTVTLYEHQRQGVKWMLDQEKLPHGISQHLWAPFPL-PQ-PRPDEKI------WFSPVLNAFTAIDP--AGPKGGILCDEMGLGKTACTLALHLLNQPKTDG-----DESEWGKIN-RHNLDVTDKKRASEY----GAHVSKGTLVVCAVSLVGQWVEEARRLCDNKLSIYPYHGGSRTKDPKKLAQYDIVVTTYGICE 1007          
BLAST of mRNA_Ecto-sp13_S_contig9024.20582.1 vs. uniprot
Match: A0A8J2SAQ4_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SAQ4_9STRA)

HSP 1 Score: 140 bits (352), Expect = 4.710e-31
Identity = 98/257 (38.13%), Postives = 135/257 (52.53%), Query Frame = 1
Query:  937 GGWASTDVTLEGLINSVRAEEK---SPMIASKLVHNPTELLKVLENVQHEALMKQPDCLTVQLFEHQRQAT*WMYDQEVLEGGAMQHLWAELHAHPQMPANDDRFCEFRRCWYSPALNQFTVKNPFEAGTKGGLLCDEMGLGKTAATLALHLIHPAQTPSPGVPLDETEWGPITGKQATPMVAPKSTSGATKAPGKVVSKGTLVVCKVSLVGQWVEEAK-RLCGGALSIYAYHGGYRKKDPTFLAKFDMVVTTYGIV 1695
            GGWA TD +L+ ++  V  E +   S   AS L    T L    ENV H  + ++   L V L ++QRQ+  +  DQE LEGG   HL+AE+      P    R    ++ WYSP L  F+ K P   G KGG+L +EMGLGKT  +LAL L++PA        L  + WGP               +G+    G + ++ TLVVC VSLV QW +EA  +   G L +Y Y+GG R  DP+ L   D+V+TTY ++
Sbjct:  616 GGWADTDTSLQAMLEGVWNEARRLNSGGRASGLQGAITHL----ENVCHAEVTQKIPQLEVTLRDYQRQSVQFCLDQEALEGGIESHLFAEVPGTYGPPDTLTR----KKLWYSPFLQTFSEKAP--DGPKGGILAEEMGLGKTIISLALVLLNPA--------LPTSTWGPP--------------AGSLPGQGAIKTRATLVVCPVSLVSQWYDEAMDKTRPGTLKVYQYYGGKRTTDPSILKDNDIVITTYQVL 840          
BLAST of mRNA_Ecto-sp13_S_contig9024.20582.1 vs. uniprot
Match: A0A7S3K2I4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2I4_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.070e-28
Identity = 96/256 (37.50%), Postives = 126/256 (49.22%), Query Frame = 1
Query:  928 LGYGGWASTDVTLEGLINSVRAEEKSPMIASKLVHNPTELLKVLENVQHEALMKQPDCLTVQLFEHQRQAT*WMYDQEVLEGGAMQHLWAELHAHPQMPANDDRFCEFRRCWYSPALNQFTVKNPFEAGTKGGLLCDEMGLGKTAATLALHLIHPAQTPSPGVPLDETEWGPITGKQATPMVAPKSTSGATKAPGKVVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYAYHGGYRKKDPTFLAKFDMVVTTYGIV 1695
            L  GGWAST V +E L  S+ AE K     S+  ++   L+  LEN  H A + QPD LTV L   QRQA  WM DQE L GG   HL++      Q+  N   F       Y P    F  K+P    T+GG+L  EMG+GKT  ++   L +P    +P        WG +                    PGK ++KGTLVVC VSLVGQW  E ++   G   IY Y+G  R  +   L ++D+VVTTY ++
Sbjct:  525 LNSGGWASTAVDIESLQYSIIAETKKK---SQQYNSIRGLIIDLENRGH-AEIPQPDGLTVTLLPFQRQAVRWMLDQEHLPGGINSHLFS------QVQLNGQSFM------YCPVFGYFR-KDPINT-TRGGILATEMGMGKTIISVGTILANPPPIGNPAA------WGSLI-------------------PGKTLAKGTLVVCPVSLVGQWCNECEQKLAGNYRIYRYYGSSRTTNVDLLKEYDIVVTTYLVL 737          
BLAST of mRNA_Ecto-sp13_S_contig9024.20582.1 vs. uniprot
Match: A0A7S2NSH7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NSH7_9STRA)

HSP 1 Score: 125 bits (314), Expect = 2.070e-26
Identity = 86/228 (37.72%), Postives = 126/228 (55.26%), Query Frame = 1
Query: 1045 LLKVLENVQH------EALMKQPDCLTVQLFEHQRQAT*WMYDQEVLEGGAMQHLWAELHAHPQ-MPANDDRFCEFRRCWYSPALNQFTVKNPFEAGTKGGLLCDEMGLGKTAATLALHLIHPAQTPSPGVPLDETEWGPITGKQA---TPMVAPKSTSGATKAP-GKVVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYAYHGGYRKKDPTFLAKFDMVVTTYGIV 1695
            L+  LEN+ H      E L+ Q   +TV L   QRQA  W  ++E +EGG  +  W +L  +     AN D        W+SPAL+ F+ KNP +   +GGL+C+EMGLGKT  +LAL L++PA        L E  +   + K +   +   A      + +   G+++S+GTLVVC VSLVGQWV+EA+        +Y Y+GG R ++P  LA+  +VVTTY ++
Sbjct:  285 LMNALENLGHSEGDVAERLLGQ---MTVDLLPFQRQAVQWALERENMEGGVQRLWWTKLPENRTGNAANKDSL------WFSPALDMFS-KNPPKR-IRGGLICEEMGLGKTVISLALCLLNPAPATPLSGSLTEAAYANASSKISCNDSDWTASNMEPDSVRTERGRIISRGTLVVCHVSLVGQWVDEARSKLSDPGLVYPYYGGDRNRNPVTLAQNAIVVTTYAVL 501          
BLAST of mRNA_Ecto-sp13_S_contig9024.20582.1 vs. uniprot
Match: A0A7S1Z2T4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z2T4_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.060e-25
Identity = 86/223 (38.57%), Postives = 118/223 (52.91%), Query Frame = 1
Query: 1048 LKVLENVQHEALMKQPDCLTVQLFEHQRQAT*WMYDQEVLEGGAMQHLWAELHAHPQMPANDDRFCEFRRCWYSPALNQFTVKNPFEAGTKGGLLCDEMGLGKTAATLALHLIHPAQ-TPSPGVPLDETEWGPITGKQATPMVAPKSTSGATKAP--------GKVVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYAYHGGYRKKDPTFLAKFDMVVTTYG 1689
            L+ LEN+ H         L ++L   QRQA  W  ++E  EGG   HLW ++ A      +D R  + +  ++SPAL+ F+   P +   +GG+L +EMGLGKT  +LAL L++PA   P  G  +   + G    K  T M    +  G T  P        G + S+GTLVVC VSLVGQW +EAK        I +YHG  R+K+ T LAK  +VVTTY 
Sbjct:  774 LQQLENLGHNPCPA-VSGLNIELLAFQRQAVGWAIERENTEGGVQSHLWVKIPA-----PSDGRQRKSKDVYFSPALDMFSHHAPEKV--RGGILAEEMGLGKTVISLALVLLNPAPPAPESGTKVASFDLG----KPDTSMQNGWTKGGKTGRPTSENSASRGSIFSRGTLVVCNVSLVGQWTDEAKSKLKDPGLICSYHGTNREKNATILAKNAIVVTTYA 984          
BLAST of mRNA_Ecto-sp13_S_contig9024.20582.1 vs. uniprot
Match: A0A1Y1I9A0_KLENI (DEAD-box protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I9A0_KLENI)

HSP 1 Score: 117 bits (294), Expect = 6.940e-24
Identity = 85/216 (39.35%), Postives = 109/216 (50.46%), Query Frame = 1
Query: 1054 VLENVQHEALMK--QPDCLTVQLFEHQRQAT*WMYDQEVLEGGAMQHLWAELHAHPQMPANDDRFCEFRRCWYSPALNQFTV--KNPFEAGTKGGLLCDEMGLGKTAATLALHLIHPAQTPSPGVPLDETEWGPITGKQATPMVAPKSTSGATKAPGKVVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYAYHGGYRKKDPTFLAKFDMVVTTYG 1689
            +LE VQ  +  +  QPD L V L  +QRQ+  +M D E  +GG    +W ++       A +D F       Y PAL +  +  K      T GG LC+EMGLGKT   LAL L +P   P    P        +T +Q TP +            G V SK TLVVC VSLVGQW+ EAK      +++Y YHG  R  DP FLA+ D+VVTTY 
Sbjct:  450 LLEKVQSTSYPEEPQPDGLGVTLRPYQRQSLRFMLDNERRDGGFHGLMWRQIPG--AGTAEEDVF-------YCPALQRLKLVTKGTLPPPTTGGFLCEEMGLGKTVEILALILANPHPNPPQLTPQ-------VTIQQPTPPIP----------AGGVPSKATLVVCAVSLVGQWISEAKGKLSAPINMYKYHGQGRSSDPFFLARQDIVVTTYA 639          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9024.20582.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0T8_ECTSI1.740e-31583.66Helicase ATP-binding domain-containing protein n=1... [more]
A0A6H5KW09_9PHAE1.500e-11265.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0S9_ECTSI8.170e-10666.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0T2_ECTSI6.070e-7735.28Helicase ATP-binding domain-containing protein n=1... [more]
A0A835YWG4_9STRA4.580e-5347.43SNF2 family N-terminal domain-containing protein n... [more]
A0A8J2SAQ4_9STRA4.710e-3138.13Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A7S3K2I4_9STRA3.070e-2837.50Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2NSH7_9STRA2.070e-2637.72Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1Z2T4_9STRA1.060e-2538.57Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Y1I9A0_KLENI6.940e-2439.35DEAD-box protein n=1 Tax=Klebsormidium nitens TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9024contigEcto-sp13_S_contig9024:309..5919 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score500.0
Seed ortholog evalue8.9e-139
Seed eggNOG ortholog2880.D7G0T8
Model size1701
KEGG koko:K15173
KEGG Pathwayko04918,map04918
Hectar predicted targeting categoryother localisation
Exons10
EggNOG free text desc.helicase activity
EggNOG OGsCOG0553@1,KOG1001@2759
Ec32 ortholog descriptionSNF2-related helicase domain protein
Ec32 orthologEc-23_001530.1
Cds size1020
COG Functional cat.KL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03021
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9024.20582.1prot_Ecto-sp13_S_contig9024.20582.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9024 3368..5796 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464175.8727982-UTR-Ecto-sp13_S_contig9024:308..4341681464175.8727982-UTR-Ecto-sp13_S_contig9024:308..434Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9024 309..434 -
1681464175.8859618-UTR-Ecto-sp13_S_contig9024:1061..11781681464175.8859618-UTR-Ecto-sp13_S_contig9024:1061..1178Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9024 1062..1178 -
1681464175.8987076-UTR-Ecto-sp13_S_contig9024:1890..20281681464175.8987076-UTR-Ecto-sp13_S_contig9024:1890..2028Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9024 1891..2028 -
1681464175.907978-UTR-Ecto-sp13_S_contig9024:2756..28491681464175.907978-UTR-Ecto-sp13_S_contig9024:2756..2849Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9024 2757..2849 -
1681464175.9178848-UTR-Ecto-sp13_S_contig9024:3283..33671681464175.9178848-UTR-Ecto-sp13_S_contig9024:3283..3367Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9024 3284..3367 -
1681464176.0009236-UTR-Ecto-sp13_S_contig9024:5796..59191681464176.0009236-UTR-Ecto-sp13_S_contig9024:5796..5919Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig9024 5797..5919 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464175.9285562-CDS-Ecto-sp13_S_contig9024:3367..34121681464175.9285562-CDS-Ecto-sp13_S_contig9024:3367..3412Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9024 3368..3412 -
1681464175.9395592-CDS-Ecto-sp13_S_contig9024:3595..36491681464175.9395592-CDS-Ecto-sp13_S_contig9024:3595..3649Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9024 3596..3649 -
1681464175.9512951-CDS-Ecto-sp13_S_contig9024:3939..40531681464175.9512951-CDS-Ecto-sp13_S_contig9024:3939..4053Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9024 3940..4053 -
1681464175.9636075-CDS-Ecto-sp13_S_contig9024:4358..49821681464175.9636075-CDS-Ecto-sp13_S_contig9024:4358..4982Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9024 4359..4982 -
1681464175.9750383-CDS-Ecto-sp13_S_contig9024:5307..54271681464175.9750383-CDS-Ecto-sp13_S_contig9024:5307..5427Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9024 5308..5427 -
1681464175.989682-CDS-Ecto-sp13_S_contig9024:5733..57961681464175.989682-CDS-Ecto-sp13_S_contig9024:5733..5796Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9024 5734..5796 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9024.20582.1

>prot_Ecto-sp13_S_contig9024.20582.1 ID=prot_Ecto-sp13_S_contig9024.20582.1|Name=mRNA_Ecto-sp13_S_contig9024.20582.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=340bp
MWEDVLQKHSAHHLEQSEDTQLLQVLKNAYEESLIDVEMRAECDPSFTKG
FFSVEVVLLTKLLSRGYSLEERVGKSYTSEKDRRLVDFMPVVERLVLHTA
ANQNPEVDSASPTSSPFSSSASYLSPSPSLPLDPSSSTSPLSYGPPPALP
PTSSSSSSSSIPPAPFGANAVTTKNKGKQRAIIELGSDDEEEEEEYDFSP
QPATPTAPKSKPFVDTFGAASSSGGDGESSGTVGGGTDAGELSVGVAASG
GAVVGGPGRKFQPSKPAHLGYGGWASTDVTLEGLINSVRAEEKSPMIASK
LVHNPTELLKVLENVQHEALMKQPDCLTVQLFEHQRQAT*
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mRNA from alignment at Ecto-sp13_S_contig9024:309..5919-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9024.20582.1 ID=mRNA_Ecto-sp13_S_contig9024.20582.1|Name=mRNA_Ecto-sp13_S_contig9024.20582.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5611bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9024:309..5919- (Ectocarpus species13 EcNAP12_S_4_19m)
GGCACTGAAGAACAACATTTGGCCAAACGTTGTTCTCGATCGGCACTCCT CCGTCATCCCACGTCCACATGCCTTCAGGCGCATTTCGAGACTTTCGTTT CGCGGACCCCACTGCCTGTGACCATGTGGGAAGATGTACTCCAGAAGCAC AGTGCTCACCACCTGGAACAGTCAGAGGACACCCAGGTATCCAACCCACC AATCGACGTCGCTCTGATGAATGCCGGCTTGAAATACGTTACGCAGGAAT GAATATGGTGGACCCACGAGCACTGCCACTGCTCATACACGTTTGCGATC GGACATTCACCCTCTTGACTCAATACGAAGACCTGAGATTCTTGATTGAC TGTCTTTTTTTTCCCAATCCTCGACGACCAGTAGGAATATTGGCAGAGCC TCTTTCGCACCGTACGTCAATCCCACAGCTTGGGATCGATCACGGTGCCA GCTTTTCCGTCCGGTCTGAACTCGCCGGTCTGGTCATTTCAGCTCTTGCA GGTGCTCAAGAACGCGTACGAGGAATCCCTGATCGACGTAGAAATGCGGG CAGAGTGCGACCCTAGCTTCACTAAAGGCTTTTTCTCCGTCGAGGTCGTC CTCCTCACGAAGGTGACTTCCGCCTGACGTACCAGGCGTTTTCGAGAATG GTACCGTGGAATACGGACGCAAATGTGCACTGAGCCTCCCGGTTGACGCG TAGTAGTGAACAATATGGGTGCTCCTCTCCTTGTGTGATCGGTTCTTTCC TCTCAAAACCGTATATGGGCGTGGAACGCGGCGAGTTGTCAGCCCGCCTG GCCCAGTAGCCCATCTTTGGGTTCCCGTTCACACCTGTACGAAGGGAGTG AAAATGAAATACACCGAACACTGGGAACAATCGACCGAATCCCCTTCGTG CACCTCGTTCCACCCCCACCTCTTCACCCGCACGCAGCTTCTCTCCCGGG GTTATAGCCTAGAGGAGCGAGTCGGCAAGAGCTACACCTCCGAGAAAGAC CGCCGGTTGGTGGACTTCATGCCTGTTGTGGAGAGGCTCGTACTGCACAC TGCAGCGAACCAGAACCCCGAGGTCGACAGTGCCTCCCCCACCTCTTCTC CGTTTTCGTCCTCCGCGTCTTACCTCTCCCCCTCTCCCTCTCTTCCCCTT GATCCGTCCTCGTCTACCTCCCCTTTGTCCTACGGGCCCCCCCCGGCTCT TCCCCCCACCTCCTCCTCCTCCTCCTCTTCCTCCATCCCCCCTGCGCCCT TCGGTGCCAACGCCGTCACCACGAAGAACAAGGGGAAACAGCGCGCGATA ATCGAGCTCGGTTCCGACGACGAAGAAGAGGAAGAAGAGTATGACTTTTC GCCGCAGCCCGCGACGCCCACCGCTCCTAAGAGCAAGCCCTTCGTCGACA CCTTCGGCGCTGCCTCCAGCTCCGGCGGCGACGGCGAAAGTTCCGGGACG GTTGGCGGAGGCACCGACGCCGGCGAGCTCAGTGTCGGGGTTGCTGCTAG TGGCGGCGCGGTGGTCGGCGGACCCGGGCGGAAATTCCAGCCTTCCAAAC CGGCGCATCTCGTGAGTCTGATGTCAAAGTAGAGCTGAGATCGGTGCAGT CTGGAGGCTCATGCTGTAAGAAGTTATTGGATTCGTGTTTCCGTGCGTCC TTGAGAGGCTCGTTTTCTGTTTAATTTTTCTTCACTCGCATCCTGTTGCC TTGTACTTCCAATTTCGATGTCTCGAAAGCCAATTCTACGCTCCTTAGGT GGTTGGTCTGAGCGATCAGAGCGACAGTCCGAAAAACATGATCACCCGTA GTAGTTCTGTTCACACTATTGTAGCCTCGGGAATGATCTGTTTCCTGCAA CTTTTTATCACACCAGGGATACGGTGGGTGGGCGTCGACAGATGTCACCC TTGAAGGACTGATTAACAGCGTTCGCGCGGAGGAGAAGAGCCCGATGATT GCCTCCAAGCTGGTCCACAATCCGACTGAGGTGATGGAGTCATTATTCGT GACGTTGGTTTTGACCAGACCAGCCGCAGTCGGGCGATGCTCGGAGTGCA TTTTCGTTTGTTTCTCTTCCCCACCCAGCGATTTTCGAACACCAACGACA AGAATACCCCGCACACTTGTTCATGACTCGGGGGGAGATTTTCGCAACGC CGTATGCACGACCCTGCTGACCTGCCGGCTCAAAATTTTGTTGCGTGTTG TTGAAACAATCGAGTGGCCTTGCTGACCGGTGCTTTCGGCCTCGCTTTGT CGACGTCTTGCTTCCAACAGCTGCTCAAGGTGCTGGAGAACGTGCAACAC GAGGCCCTGATGAAACAGCCGGACGTGAGTGATTCCCATCACCGCTGCTC TGGGGTCTCGAAATGCTTCAGAAATTGGAGATGAACATTTCTCTCTCTTC CCGGCGTGTTGTCCCAACTCCCCTATCGCCCGCTAATCGTTTGAGGAACT TTGCGTCACGGTTGATTCTCTGACTCGCGCTGGTGTTCATTCTGCCGCTT GTGACAGTGTCTTACGGTGCAGTTGTTCGAGCACCAGCGGCAGGCCACCT AGTGGATGTATGATCAGGAAGTGCTGGAAGGGGGCGCCATGCAGCACCTC TGGGCGGAGTTGCACGCCCACCCTCAAATGCCAGCGGTGAGTTGGGGGCC AGGCGCTTCGACCAACCGTAGGGAGTTACTGCCCTACTCGCAAGACGTCA AACAAATCACTTGACGATTAGCGCGTCTCGCGATGTGTCGACTGCGGATA GCTCCAGTAATTAAGTTATGTTTTTGAGGTTCTTCGCCGGATAACTGATC TAGAGGTTCGTCACACAAGATGGCCATTTGAAGACGAATTCTTCTTGGAG TCAGGTCGAATGGATTATCAGGTTCGCTGCACAGTTTCTATATTTTCTCT TTCACTCCACCGTCCGAGTTCGGCGGTCAGGCTGGAACTTTGCATCGTGA AATGTACTCCAGGAAGCGAATATTCAACTCAAGCACCGCGCTACGCGTCG GCCGCCCTGAAGCCCGATGGTGTGGTTTGCGGCCCACCGCTTGCTCTCAA CCGTCCAATCATCTGGTCAGAACGACGACCGCTTTTGCGAGTTCCGCCGC TGCTGGTACTCTCCCGCCCTGAACCAGTTCACCGTCAAGAACCCCTTCGA AGCCGGAACAAAAGTGAGAGATCTGTGACGTCCCCGCGTTGCCATATCGG CTCCCGGCTGCGCCCCTCACGAACAGGTTTTCATGCAGACCGTTTGGCTA AGAGAAGACGAAAAAACGCCAGTTCCGGTCTTGAACCGTGTAGAGTTGTC AGATATTTAGGCCACCAAGCGCTAGTCGCTCGTTCCTCGGTTCTCTCAAG CGCTCGAGCGTACGTTTGTCACTTTAGCGCCACTACTGTGTCGGGCCAAT TGTCAGCCGAAAGGAGAGATGTCCGTGGTGTCGTCGTATCGCAGACGATT TCGCACTGGCGCACGCCTGGAGCAATACTGTTGTGCCATGTTGTAGACTA TCTAACTAGTACCTTACCTGCGGGCTTGCATACGATTCTTGCTCTTGGCC GCATGACCTAGAGACTTCGTCGTGTTAACATCGAGCATTATTTTTGTAGA ATTGTACCTTTCCGATGGCGCACGATTTCTCTCTCAGGTAAACTCTGCAT TTGGTCGTGCAAGGCTGTCCCCCCTTGCGGTCGAGAAGGACCGGTCCGTT TGCTTACCGTATATCACTTTAGACCTTGAAGGATAGCCAACTTCGTGCCG TGTTGTGTCATTCGTCCGCCGAATTTCGAGTTTGCCTGCACTACGGGAGC GAATCCAGGGTTTGTGTAGCATACACATGCCTAGAAAATGAACTTCGTCC TTGCCTGCCTATCAACTCTGCGCATGTTCGCTTGTGTTCAGGGTGGCCTT CTGTGCGATGAGATGGGGCTCGGCAAGACTGCCGCCACGCTGGCCCTCCA TCTGATACATCCGGCCCAAACCCCATCCCCGGGAGTTCCGCTCGACGAGA CGGAGTGGGGACCCATCACTGGCAAACAGGTGCGTCCTCGAGATGGGGCT GGGCTGAGGTAGCATTGGAAGTGTTCGCTTGACGTTCTCAGCACATTTCC TCGCAAAACTCGGCCATCTGTTCTCTGTAGAAATTTGGAATGGCACCGAA AAGGAGAGAGTGTATGTACCGGTTGCCAACAAGGAAGACGACAAAATAAT GTGCGAGATGCAGACACATGACACCCTTGAACGACCTGAGCAAAATAAGT CAAATTCGGCTGGCTTGGATGTTCTCGGCAACTACTCCAGATGCGCGTGT GATGTTTGCGGGATTCACCATGTTTCCCTTCGAGCGCTTGGACCTCCTCC CTACATTCTTGCACCTATCTAACCCGTTAGAGCCATGCGGCGGAGGACGA AACTAACATCGAATTCCAGGAATACGGTCGGTAACCCCAACCGCATCCAT CATCGTGGCTGTCTAGGGGGTTTCGTGGCTCGGGTTGATCGGGGACAAAC TGTGCCGCACTGCAAAACGACTTGAAACTGATGCTCAACCGTAAACAAAG GGGTAGGGCAACACCCAAGTTTGAAATGCCTTACGTGGTGACCCGCAAAG CAGTAGCTCTACTTCGAGGAGAACCTAGGTACGAATTCAAGGCCGACCTT CTCTTGCAGTTGCTCCGTGTCCTGGTTTCATAGCCTTGGGGTCCTTTGAT ATCCCATTACATGCCGATGACACCGATGTCGACATGTGAAGGCCACCCCG ATGGTCGCCCCAAAGTCTACCTCGGGGGCTACGAAAGCTCCAGGAAAGGT GGTGTCCAAGGGCACCCTGGTGGTGTGCAAAGTGTCGCTCGTCGGGCAGT GGGTAGAGGTATGCAGTCTTTTCCATAGGTTTGTCGCCGTCGTTAATGCT GTCGCTGTTGTTTCGATGTTGTTGTTGTTGGTGTTATTTTAGTCTTTGTT GGAGTCTTCTTCACCATCCAACCGCTCCGCAGTTGGGGCAGCAGTACCTA CTGTTGCATTCTAATGAAATCCTTTGACCTCGGGGATCACGTTTTCGCTC TGATGATGTTGATGGTCTGCGAAAGATCGAGGGCCAGTTGTCCGACAGAC CGGGGTGACAGTGACTGCTAGAGACTGAACAGGCGTACCTCGATTCTCAA AAATTCAAGAGGCACACCTCGATTCTCTGAGCGCGGTAGGAAGGACATCC ACAACCCTACGATCACATAGTCTCTGACATATTTGGGAACATAACTGGTC CTTTGAGGGCCTTCTTCGAAAGACGCCGAAGAAGCAATAGACTGCGCCTC TGGTCTACAGTAGTCCAAGCGCCCTTGTTTCACCGAAACATGAAGGTTCG CATGCCAAGAGCACATTGAGCCTTTCCAGTCCCACAAAAATGTTTTTGTA TGGCGTTCTACGGTTCCGAGAGCTTGGGAAACATCTGTCTACGCTCCTTC GTGTGGGAAACCCTTTGCTTGCACGTTCGGCGCAGGAGGCCAAGCGTCTC TGCGGCGGCGCGCTGTCGATCTACGCGTACCACGGCGGCTACCGCAAGAA AGACCCAACCTTCCTCGCAAAGTTCGACATGGTGGTCACCACCTACGGGA TAGTCCAGGTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9024:309..5919-

>mRNA_Ecto-sp13_S_contig9024.20582.1 ID=mRNA_Ecto-sp13_S_contig9024.20582.1|Name=mRNA_Ecto-sp13_S_contig9024.20582.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1020bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9024:309..5919- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGGGAAGATGTACTCCAGAAGCACAGTGCTCACCACCTGGAACAGTC
AGAGGACACCCAGCTCTTGCAGGTGCTCAAGAACGCGTACGAGGAATCCC
TGATCGACGTAGAAATGCGGGCAGAGTGCGACCCTAGCTTCACTAAAGGC
TTTTTCTCCGTCGAGGTCGTCCTCCTCACGAAGCTTCTCTCCCGGGGTTA
TAGCCTAGAGGAGCGAGTCGGCAAGAGCTACACCTCCGAGAAAGACCGCC
GGTTGGTGGACTTCATGCCTGTTGTGGAGAGGCTCGTACTGCACACTGCA
GCGAACCAGAACCCCGAGGTCGACAGTGCCTCCCCCACCTCTTCTCCGTT
TTCGTCCTCCGCGTCTTACCTCTCCCCCTCTCCCTCTCTTCCCCTTGATC
CGTCCTCGTCTACCTCCCCTTTGTCCTACGGGCCCCCCCCGGCTCTTCCC
CCCACCTCCTCCTCCTCCTCCTCTTCCTCCATCCCCCCTGCGCCCTTCGG
TGCCAACGCCGTCACCACGAAGAACAAGGGGAAACAGCGCGCGATAATCG
AGCTCGGTTCCGACGACGAAGAAGAGGAAGAAGAGTATGACTTTTCGCCG
CAGCCCGCGACGCCCACCGCTCCTAAGAGCAAGCCCTTCGTCGACACCTT
CGGCGCTGCCTCCAGCTCCGGCGGCGACGGCGAAAGTTCCGGGACGGTTG
GCGGAGGCACCGACGCCGGCGAGCTCAGTGTCGGGGTTGCTGCTAGTGGC
GGCGCGGTGGTCGGCGGACCCGGGCGGAAATTCCAGCCTTCCAAACCGGC
GCATCTCGGATACGGTGGGTGGGCGTCGACAGATGTCACCCTTGAAGGAC
TGATTAACAGCGTTCGCGCGGAGGAGAAGAGCCCGATGATTGCCTCCAAG
CTGGTCCACAATCCGACTGAGCTGCTCAAGGTGCTGGAGAACGTGCAACA
CGAGGCCCTGATGAAACAGCCGGACTGTCTTACGGTGCAGTTGTTCGAGC
ACCAGCGGCAGGCCACCTAG
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