prot_Ecto-sp13_S_contig8962.20501.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8962.20501.1
Unique Nameprot_Ecto-sp13_S_contig8962.20501.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length143
Homology
BLAST of mRNA_Ecto-sp13_S_contig8962.20501.1 vs. uniprot
Match: D7FVB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB7_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 1.610e-74
Identity = 127/142 (89.44%), Postives = 132/142 (92.96%), Query Frame = 0
Query:    1 MLQGGVTPRPASSSQFLHSVRAVGVGALRMADGDGDAMSAAEETAKRLKEQAAALRDSAAESEAEIRPAVDKENEVKETLAAGVRPEDMPPKRKISDDMQKRLRQELISQGADPNRSAGNPILIVAGIIAVLVIVGGQGIFY 142
            ML GGVTPRPASSS  LHSVRAVGVGALRMADGDGDAMSAAEETAKRLKEQAAALR+SAAESEAEIRPA DK +EV ET    VRPEDMPPK+KIS+DMQKRLRQELISQGADPNRSAGNPIL+VAGIIAVLVIVGGQGIFY
Sbjct:    1 MLHGGVTPRPASSSSHLHSVRAVGVGALRMADGDGDAMSAAEETAKRLKEQAAALRESAAESEAEIRPASDKADEVTETPVPAVRPEDMPPKQKISNDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 142          
BLAST of mRNA_Ecto-sp13_S_contig8962.20501.1 vs. uniprot
Match: A0A7S2V2G0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G0_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 4.190e-14
Identity = 36/48 (75.00%), Postives = 44/48 (91.67%), Query Frame = 0
Query:   95 ISDDMQKRLRQELISQGADPNRSAGNPILIVAGIIAVLVIVGGQGIFY 142
            +S++M+ +LR+ELISQGADPNR++GNPILIV  IIAVLVI GGQGIFY
Sbjct:  103 MSENMKNKLRRELISQGADPNRASGNPILIVGAIIAVLVIAGGQGIFY 150          
BLAST of mRNA_Ecto-sp13_S_contig8962.20501.1 vs. uniprot
Match: A0A836CMY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMY3_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.210e-13
Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = 0
Query:   45 AKRLKEQAAALRDSAAESEAEIRPAVDKENEVKETLAAGVRPEDMPPKRKISDDMQKRLRQELISQGADPNRSAGNPILIVAGIIAVLVIVGGQGIFY 142
            A+RL +QAA LR+  A  E +      K   V+    A    E    ++++S+ M+ +LR+ELISQGADPNRS+GN ILIVA +I VLV++GGQGIFY
Sbjct:   59 AQRLSDQAAKLREEIAAMEGDRPKPAPKAEPVQ--AKADAEEEAGFKEKELSEAMKAKLRKELISQGADPNRSSGNGILIVAAVIGVLVVLGGQGIFY 154          
BLAST of mRNA_Ecto-sp13_S_contig8962.20501.1 vs. uniprot
Match: A0A7S4D594_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D594_HETAK)

HSP 1 Score: 70.9 bits (172), Expect = 8.900e-13
Identity = 47/100 (47.00%), Postives = 67/100 (67.00%), Query Frame = 0
Query:   43 ETAKRLKEQAAALRDSAAESEAEIRPAVDKENEVKETLAAGVRPEDMPPKRKISDDMQKRLRQELISQGADPNRSAGNPILIVAGIIAVLVIVGGQGIFY 142
            E AK+L EQAAALR  A   EAE + ++             +  E+  P+ +IS  M+++LR+EL +QGA+PN++A NPILI++G+IAVLVI+ G GIFY
Sbjct:   52 EKAKKLAEQAAALRAEADAMEAEKKASMPAAXXXXXXXXXAM--EEELPRVEISSAMKEKLRRELEAQGANPNKAAANPILIISGVIAVLVILAGGGIFY 149          
BLAST of mRNA_Ecto-sp13_S_contig8962.20501.1 vs. uniprot
Match: A0A0G4H860_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H860_VITBC)

HSP 1 Score: 63.2 bits (152), Expect = 8.540e-10
Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 0
Query:   92 KRKISDDMQKRLRQELISQGADPNRSAGNPILIVAGIIAVLVIVGGQGIFY 142
            K +IS DM+KRL +EL  QGA+PN+S GNP LI+  IIA LVI+GG+GIFY
Sbjct:  102 KPEISPDMKKRLLRELEGQGANPNKSRGNPYLIIFVIIAALVILGGKGIFY 152          
BLAST of mRNA_Ecto-sp13_S_contig8962.20501.1 vs. uniprot
Match: W7TC08_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TC08_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 4.430e-9
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0
Query:   73 ENEVKETLAAGVRPEDMPPKRKISDDMQKRLRQELISQGADPNRSAGNPILIVAGIIAVLVIVGGQGIFY 142
            EN  K+ +    R E MPP   +SD+M+++L  E   QGAD N S GNPIL++A +I VLV++GG+G FY
Sbjct:   65 ENGQKKKITEPARRE-MPPPTPLSDNMRQKLLNEARGQGADYNTSNGNPILLIAVVIGVLVVLGGKGFFY 133          
BLAST of mRNA_Ecto-sp13_S_contig8962.20501.1 vs. uniprot
Match: A0A4D9CZL2_9STRA (Symplekin_C domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZL2_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.650e-6
Identity = 26/48 (54.17%), Postives = 37/48 (77.08%), Query Frame = 0
Query:   95 ISDDMQKRLRQELISQGADPNRSAGNPILIVAGIIAVLVIVGGQGIFY 142
            +SD+M+++L  E   QGAD N S GNPIL++A +I VLV++GG+G FY
Sbjct:  166 LSDNMRQKLLNEARGQGADYNTSNGNPILLIAVVIGVLVVLGGKGFFY 213          
BLAST of mRNA_Ecto-sp13_S_contig8962.20501.1 vs. uniprot
Match: A0A7S1UZ10_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZ10_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 9.710e-5
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
Query:   90 PPKRKISDDMQKRLRQELISQGADPNRSAGNPILIVAGIIAVLVIVGGQGIFY 142
            P K  ISD M++RL +E  S G D N+   N IL + G +AVLV++GGQGIFY
Sbjct:  119 PVKVGISDSMRERLAREA-STGLDSNKKQDNVILYIIGAVAVLVVLGGQGIFY 170          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8962.20501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FVB7_ECTSI1.610e-7489.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V2G0_9STRA4.190e-1475.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CMY3_9STRA2.210e-1348.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D594_HETAK8.900e-1347.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4H860_VITBC8.540e-1064.71Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
W7TC08_9STRA4.430e-948.57Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9CZL2_9STRA1.650e-654.17Symplekin_C domain-containing protein n=2 Tax=Nann... [more]
A0A7S1UZ10_9STRA9.710e-552.83Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 38..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..121
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 142..142
NoneNo IPR availableTMHMMTMhelixcoord: 119..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8962contigEcto-sp13_S_contig8962:1293..4148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8962.20501.1mRNA_Ecto-sp13_S_contig8962.20501.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8962 1293..5243 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8962.20501.1 ID=prot_Ecto-sp13_S_contig8962.20501.1|Name=mRNA_Ecto-sp13_S_contig8962.20501.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=143bp
MLQGGVTPRPASSSQFLHSVRAVGVGALRMADGDGDAMSAAEETAKRLKE
QAAALRDSAAESEAEIRPAVDKENEVKETLAAGVRPEDMPPKRKISDDMQ
KRLRQELISQGADPNRSAGNPILIVAGIIAVLVIVGGQGIFY*
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