prot_Ecto-sp13_S_contig8919.20448.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8919.20448.1
Unique Nameprot_Ecto-sp13_S_contig8919.20448.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length872
Homology
BLAST of mRNA_Ecto-sp13_S_contig8919.20448.1 vs. uniprot
Match: A0A6H5L2V4_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2V4_9PHAE)

HSP 1 Score: 824 bits (2129), Expect = 2.820e-287
Identity = 571/796 (71.73%), Postives = 581/796 (72.99%), Query Frame = 0
Query:    1 MLDPSQNDTPWTEEEESIIHDAHLRLGNRWAEIAKLLTGRTDSAVKNYWYTTAHKNIGRQNKEIRGGGGDGGGDPSRSRDAGARGSSTIDPIGPGGGSVATNGGGPGFNDDPKPDVVPGEAGIAGGCCAPVGHVEGGECQLQPVVAGLGVCAGIGPPPAMAVATAAAVATHGRGMPPVGAAAAAPEVESSSPPALVPASASTLGTTAPAAVEGSNRWQVSDDNKRGVVSQTAIGSLTKTEATDPRKAAACYRELDKNVAGENGDGSASTGDAGAVHGRHLATSAATGAVEEAAGDRKDGGCGVILGPGGVAPATSSLLGQASVVNAHAVSNTVTKSPPLPAPASSVGSRDRDQQIGSKRPRPRLFVNTNVDVAGMYIGGHEQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAARAPHAVSMSAVPFGCPPGLGSSAAEAASXXXXXXXRYASGMAPVGNAPLPPMHYHXXXXXXXXXXXXXXXQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMGAAGRGEGVEVXXXXXXXXXXXXXXXXXXXXXDHPIAIPGTSVRRYMHVQLLLALMSAPGLRVVAPARVSWDRLGYYPVDAVFGPPKPGARPPGPPRLTPTSTAIPTMPGLSPNSQFGSDPAAAALVPSKRPRPGTGPPVAGGGGXXXXXXXXXXXXXXXXXXXXXXXXG---------------------EVSIRETMPAIGGRG 775
            MLDPSQ + PWTEEE +IIHDAHLRLGNRWAEIAKLLTGRTDSAVKNYWYTTAHKNIGRQNKEIRGGGGDGG DPSRSRDAGARGSSTIDPIGP G SVATNGGGPGF DDPKPDVVP EA IAGGC APVGHVEGGECQLQPVVAGLGVC GIGPPPAMAVATAAAVATHG+GMPPVGAA AAP VES SPPALVP+SASTLGTTAPAAV+ +NRWQVSDDNKRGVV+QTAIGSLTKTEATDPRKAAACY ELDK VAGENGDGSASTGDAGAVHG HLATSAA+ AVEEA G RKDG CGV+LGPGGVAPATSSLL QASVVNAHAVSNTVTKSPPLPAPASSVGSRDRDQQIGSKRPRPRLFVNTNVD AGMYIGGHEQ   XXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXX         ARAPHAVSMSAVPFGCPPGLGSSAAE                                                                                                                                        XXXXXXXXXXXXXXXXXXX  DHPIAIPGTSVRRYMHVQLLLALMSAPGLRVV PARVSWDRLGYYPVDAVFGPPKPGARPPGPPRLTPTSTAIPTMPGLSP SQFGSD AAAALVPSKR R GTGPPVA GGG    XXXXXXXXXXXXXXXXXXXX                      EV +RETMPAIGGRG
Sbjct:    1 MLDPSQKNAPWTEEEITIIHDAHLRLGNRWAEIAKLLTGRTDSAVKNYWYTTAHKNIGRQNKEIRGGGGDGGSDPSRSRDAGARGSSTIDPIGPRGESVATNGGGPGFYDDPKPDVVPREAVIAGGCSAPVGHVEGGECQLQPVVAGLGVCGGIGPPPAMAVATAAAVATHGQGMPPVGAATAAPGVESPSPPALVPSSASTLGTTAPAAVDENNRWQVSDDNKRGVVNQTAIGSLTKTEATDPRKAAACYGELDKKVAGENGDGSASTGDAGAVHGWHLATSAASDAVEEAPGHRKDGSCGVVLGPGGVAPATSSLLEQASVVNAHAVSNTVTKSPPLPAPASSVGSRDRDQQIGSKRPRPRLFVNTNVDAAGMYIGGHEQQQHXXXXXXXXXXXXXXXXXXXXXXXXGFEADANAXXXXXXXXXXXXX---------ARAPHAVSMSAVPFGCPPGLGSSAAE---------------------------------------------------------------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXGGDHPIAIPGTSVRRYMHVQLLLALMSAPGLRVVTPARVSWDRLGYYPVDAVFGPPKPGARPPGPPRLTPTSTAIPTMPGLSPRSQFGSDSAAAALVPSKRARSGTGPPVAEGGGDSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVCVRETMPAIGGRG 652          
BLAST of mRNA_Ecto-sp13_S_contig8919.20448.1 vs. uniprot
Match: D7FNQ9_ECTSI (Transcription factor C-MYB n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ9_ECTSI)

HSP 1 Score: 574 bits (1479), Expect = 1.230e-191
Identity = 338/468 (72.22%), Postives = 350/468 (74.79%), Query Frame = 0
Query:    1 MLDPSQNDTPWTEEEESIIHDAHLRLGNRWAEIAKLLTGRTDSAVKNYWYTTAHKNIGRQNKEIRGGGGDGGGDPSRSRDAGARGSSTIDPIGPGGGSVATNGGGPGFNDDPKPDVVPGEAGIAGGCCAPVGHVEGGECQLQPVVAGLGVCAGIGPPPAMAVATAAAVATHGRGMPPVGAAAAAPEVESSSPPALVPASASTLGTTAPAAVEGSNRWQVSDDNKRGVVSQTAIGSLTKTEATDPRKAAACYRELDKNVAGENGDGSASTGDAGAVHGRHLATSAATGAVEEAAGDRKDGGCGVILGPGGVAPATSSLLGQASVVNAHAVSNTVTKSPPLPAPASSVGSRDRDQQIGSKRPRPRLFVNTNVDVAGMYIGGHEQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAARAPHAVSMSAVPFGCPPGLGSSAAEAAS 468
            MLDPSQ + PWTEEEE+IIHDAHLRLGNRW+EIAKLLTGRTDSAVKNYWYTTAHKNIGRQN EIRGG GDG  DPSRS D  A GSS I+PIGPGG SVATNGG  GF DDPKPD+VPGEAGIAGGC APVGHVEGGECQLQPVVAGLGVC GIGPPPAMAVATAAAVATHG+GMPPVGAA AAP VESSSPPALVP+ ASTLGTTAP AV+G+NRWQVSDDNKRGVVSQTAIGSLTKTEAT+PRKAAACY ELDK VAGENGDGSASTGDAGAVHGRHLATSA TGAVEEA G R+DG  GV+LGPGGVAPATSSLL QASVVNAHAVSNTVTKSPPLPA                                          XXXXXXX                                               SAARAPHAVSMSAVPFGCPPGLGSSAAEAAS
Sbjct:  171 MLDPSQKNAPWTEEEENIIHDAHLRLGNRWSEIAKLLTGRTDSAVKNYWYTTAHKNIGRQNMEIRGGDGDGRSDPSRSGDTEATGSSNINPIGPGGESVATNGGASGFYDDPKPDIVPGEAGIAGGCSAPVGHVEGGECQLQPVVAGLGVCGGIGPPPAMAVATAAAVATHGQGMPPVGAATAAPGVESSSPPALVPSLASTLGTTAPPAVDGNNRWQVSDDNKRGVVSQTAIGSLTKTEATNPRKAAACYGELDKKVAGENGDGSASTGDAGAVHGRHLATSATTGAVEEAPGHRRDGSRGVVLGPGGVAPATSSLLEQASVVNAHAVSNTVTKSPPLPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------SAARAPHAVSMSAVPFGCPPGLGSSAAEAAS 591          
BLAST of mRNA_Ecto-sp13_S_contig8919.20448.1 vs. uniprot
Match: A0A835ZPI2_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPI2_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.140e-17
Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 0
Query:    2 LDPSQNDTPWTEEEESIIHDAHLRLGNRWAEIAKLLTGRTDSAVKNYWYTTAHKNIGRQNK 62
            LDPS    PWT+EEE +I++A  RLGN+WAEIAKLLTGRTD+A+KN+WY+T  KN+ R+ K
Sbjct:   54 LDPSLRRDPWTDEEEQVIYNAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNMRRRQK 114          
BLAST of mRNA_Ecto-sp13_S_contig8919.20448.1 vs. uniprot
Match: A0A835YS16_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS16_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.500e-17
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    2 LDPSQNDTPWTEEEESIIHDAHLRLGNRWAEIAKLLTGRTDSAVKNYWYTTAHKNI 57
            LDPS    PWT EEE +I+DA  RLGN+WAEIAKLLTGRTD+A+KN+WY+T  KN+
Sbjct:   54 LDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNM 109          
BLAST of mRNA_Ecto-sp13_S_contig8919.20448.1 vs. uniprot
Match: A0A7S2ST59_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST59_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.730e-14
Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    2 LDPSQNDTPWTEEEESIIHDAHLRLGNRWAEIAKLLTGRTDSAVKNYWYTTAHKNIGRQNKEI 64
            LDP+    PW+E EE II+DA  RLGN+WAEIAKLL GRTD+A+KN+WY+T  +N+ R  KEI
Sbjct:   91 LDPAIKKEPWSEHEERIIYDAQQRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNMRRLAKEI 153          
BLAST of mRNA_Ecto-sp13_S_contig8919.20448.1 vs. uniprot
Match: F0Y4P7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4P7_AURAN)

HSP 1 Score: 80.5 bits (197), Expect = 3.240e-14
Identity = 34/56 (60.71%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    2 LDPSQNDTPWTEEEESIIHDAHLRLGNRWAEIAKLLTGRTDSAVKNYWYTTAHKNI 57
            LDP+    PW+E EES+I++A  RLGN+WAEIAKLL GRTD+A+KN+WY+T  +N+
Sbjct:   77 LDPAIKREPWSEGEESVIYEAQHRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNM 132          
BLAST of mRNA_Ecto-sp13_S_contig8919.20448.1 vs. uniprot
Match: C5LKK2_PERM5 (Transcription factor MYB21, putative (Fragment) n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LKK2_PERM5)

HSP 1 Score: 81.6 bits (200), Expect = 6.640e-14
Identity = 36/55 (65.45%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    2 LDPSQNDTPWTEEEESIIHDAHLRLGNRWAEIAKLLTGRTDSAVKNYWYTTAHKN 56
            LDP  +  PWTEEE  II +AH R GNRWAEIAKLL GRTD+A+KN WY+T  +N
Sbjct:  119 LDPKVDKRPWTEEEHRIIFEAHNRFGNRWAEIAKLLPGRTDNAIKNLWYSTIRRN 173          
BLAST of mRNA_Ecto-sp13_S_contig8919.20448.1 vs. uniprot
Match: A0A7S2G8M0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G8M0_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 8.610e-14
Identity = 38/63 (60.32%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    2 LDPSQNDTPWTEEEESIIHDAHLRLGNRWAEIAKLLTGRTDSAVKNYWYTTAHKNIGRQNKEI 64
            LDP+    PW++ EE II+DA  RLGN+WAEIAKLL GRTD+A+KN+WY+T  +N+ R  KEI
Sbjct:  102 LDPAIKKEPWSDTEEHIIYDAQHRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNMRRLAKEI 164          
BLAST of mRNA_Ecto-sp13_S_contig8919.20448.1 vs. uniprot
Match: A0A7J6QS48_PEROL (Uncharacterized protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QS48_PEROL)

HSP 1 Score: 84.7 bits (208), Expect = 2.370e-13
Identity = 37/63 (58.73%), Postives = 46/63 (73.02%), Query Frame = 0
Query:    2 LDPSQNDTPWTEEEESIIHDAHLRLGNRWAEIAKLLTGRTDSAVKNYWYTTAHKNIGRQNKEI 64
            LDP  N  PWT EE  II +AH R GNRWAEIAKLL GRTD+A+KN WY+T  +N  + ++E+
Sbjct:   63 LDPEVNKRPWTSEEHRIIFEAHRRFGNRWAEIAKLLPGRTDNAIKNLWYSTVRRNSRKISREV 125          
BLAST of mRNA_Ecto-sp13_S_contig8919.20448.1 vs. uniprot
Match: A0A7S3ZTY8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTY8_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.630e-13
Identity = 35/63 (55.56%), Postives = 50/63 (79.37%), Query Frame = 0
Query:    2 LDPSQNDTPWTEEEESIIHDAHLRLGNRWAEIAKLLTGRTDSAVKNYWYTTAHKNIGRQNKEI 64
            LDP     PW+E+EE++I++A  RLGN+WAEIAKLL GRTD+A+KN+WY+T  +N+ R  K++
Sbjct:   89 LDPGIKREPWSEQEENVIYEAQQRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNMRRLAKDL 151          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8919.20448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2V4_9PHAE2.820e-28771.73MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FNQ9_ECTSI1.230e-19172.22Transcription factor C-MYB n=1 Tax=Ectocarpus sili... [more]
A0A835ZPI2_9STRA1.140e-1763.93Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A835YS16_9STRA2.500e-1767.86Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A7S2ST59_9STRA2.730e-1461.90Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0Y4P7_AURAN3.240e-1460.71Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
C5LKK2_PERM56.640e-1465.45Transcription factor MYB21, putative (Fragment) n=... [more]
A0A7S2G8M0_9STRA8.610e-1460.32Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
A0A7J6QS48_PEROL2.370e-1358.73Uncharacterized protein n=2 Tax=Perkinsus olseni T... [more]
A0A7S3ZTY8_9STRA2.630e-1355.56Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 7..55
e-value: 1.4E-12
score: 57.8
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 10..51
e-value: 7.5E-12
score: 45.2
NoneNo IPR availableGENE3D1.10.10.60coord: 9..66
e-value: 4.8E-16
score: 60.6
NoneNo IPR availablePANTHERPTHR45614:SF1MYB PROTEINcoord: 2..584
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 2..584
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 3..57
score: 19.604
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 2..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8919contigEcto-sp13_S_contig8919:3003..6034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8919.20448.1mRNA_Ecto-sp13_S_contig8919.20448.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8919 2969..6043 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8919.20448.1 ID=prot_Ecto-sp13_S_contig8919.20448.1|Name=mRNA_Ecto-sp13_S_contig8919.20448.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=872bp
MLDPSQNDTPWTEEEESIIHDAHLRLGNRWAEIAKLLTGRTDSAVKNYWY
TTAHKNIGRQNKEIRGGGGDGGGDPSRSRDAGARGSSTIDPIGPGGGSVA
TNGGGPGFNDDPKPDVVPGEAGIAGGCCAPVGHVEGGECQLQPVVAGLGV
CAGIGPPPAMAVATAAAVATHGRGMPPVGAAAAAPEVESSSPPALVPASA
STLGTTAPAAVEGSNRWQVSDDNKRGVVSQTAIGSLTKTEATDPRKAAAC
YRELDKNVAGENGDGSASTGDAGAVHGRHLATSAATGAVEEAAGDRKDGG
CGVILGPGGVAPATSSLLGQASVVNAHAVSNTVTKSPPLPAPASSVGSRD
RDQQIGSKRPRPRLFVNTNVDVAGMYIGGHEQHQHQQHLHQQHQHLHQQH
QHQHQHQPPHLHHHQQQKGFEADANASAAAAVAAAARSAARAPHAVSMSA
VPFGCPPGLGSSAAEAASKAAEAAARYASGMAPVGNAPLPPMHYHHAHFH
PHHPHHPHHPQPQPQPQPQQQPRQQQQPQRQQQPLQQHMQPHMQQQHPQH
IPQQQLLHQQQQQHMHQQQQHMQQHIQQHMQQQQQHQQHMGAAGRGEGVE
VGRGSGGSGGRGGGGGNGAGGGDHPIAIPGTSVRRYMHVQLLLALMSAPG
LRVVAPARVSWDRLGYYPVDAVFGPPKPGARPPGPPRLTPTSTAIPTMPG
LSPNSQFGSDPAAAALVPSKRPRPGTGPPVAGGGGGSSGGSGSGSGGSSG
RGGSGGSGGGEVSIRETMPAIGGRGGGGGGGGGGGGGGGGGGRDDAHRCD
GDAPTAAQPQDVGHTERATGRGGHDDARGHRGAPPVRLHITHLFYRNRRD
GRDGPHVTVPLPVDGRRRRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR009057Homeobox-like_sf