prot_Ecto-sp13_S_contig890.20408.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig890.20408.1
Unique Nameprot_Ecto-sp13_S_contig890.20408.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length148
Homology
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BLAST of mRNA_Ecto-sp13_S_contig890.20408.1 vs. uniprot
Match: D8LPF0_ECTSI (EsV-1-124 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPF0_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 5.420e-85
Identity = 132/146 (90.41%), Postives = 137/146 (93.84%), Query Frame = 0 
Query:    1 MSISCDSIVTSRVTSATSTIQIGGFTWPNTTPLPGSVLKTDGLGNLTFEVPNVYTSVDTASPAYAIGTSDDIVAVAGTLDTTLTLPDPTSKVAGDFIVVVKEGGGDNNVTVVPFGTELLSGGSSVVLSQPYSSFKIYTNGTDWFAL 146
            MSISCDSIVTSRVTSATS IQIG F WP+TTPLPGSVLKTDGLGNLTFEVPNV+TSVDTA+PAYAI TSDDIVAVAGTLDTTLTLPDP+SKV GD IVVVKEGGGDN+VTVVPFGTELLSGGSSVVLSQ Y S KIYTNGTDWFAL
Sbjct:   14 MSISCDSIVTSRVTSATSNIQIGLFNWPSTTPLPGSVLKTDGLGNLTFEVPNVHTSVDTAAPAYAISTSDDIVAVAGTLDTTLTLPDPSSKVVGDLIVVVKEGGGDNSVTVVPFGTELLSGGSSVVLSQAYGSLKIYTNGTDWFAL 159
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BLAST of mRNA_Ecto-sp13_S_contig890.20408.1 vs. uniprot
Match: Q8QNF5_ESV1K (EsV-1-124 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNF5_ESV1K)

HSP 1 Score: 249 bits (635), Expect = 6.760e-83
Identity = 128/146 (87.67%), Postives = 138/146 (94.52%), Query Frame = 0 
Query:    1 MSISCDSIVTSRVTSATSTIQIGGFTWPNTTPLPGSVLKTDGLGNLTFEVPNVYTSVDTASPAYAIGTSDDIVAVAGTLDTTLTLPDPTSKVAGDFIVVVKEGGGDNNVTVVPFGTELLSGGSSVVLSQPYSSFKIYTNGTDWFAL 146
            MSISCDSIVTSRVTSATS+IQIG FTWP+TTP  GSVLKTDGLGNLTFEVPNV+T+VDTAS AYAI TSDDIVAVAG+LDTTLTLPDP++KV GD IV+VKEGGG+N+VTVVPFGTELLSGGSSVVLSQPY SFKIYTNGTDWFAL
Sbjct:    1 MSISCDSIVTSRVTSATSSIQIGLFTWPSTTPPAGSVLKTDGLGNLTFEVPNVHTAVDTASSAYAISTSDDIVAVAGSLDTTLTLPDPSAKVTGDMIVIVKEGGGENSVTVVPFGTELLSGGSSVVLSQPYGSFKIYTNGTDWFAL 146
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig890.20408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPF0_ECTSI5.420e-8590.41EsV-1-124 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QNF5_ESV1K6.760e-8387.67EsV-1-124 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig890contigEcto-sp13_S_contig890:8554..8997 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig890.20408.1mRNA_Ecto-sp13_S_contig890.20408.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig890 8554..9006 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig890.20408.1 ID=prot_Ecto-sp13_S_contig890.20408.1|Name=mRNA_Ecto-sp13_S_contig890.20408.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp
MSISCDSIVTSRVTSATSTIQIGGFTWPNTTPLPGSVLKTDGLGNLTFEV
PNVYTSVDTASPAYAIGTSDDIVAVAGTLDTTLTLPDPTSKVAGDFIVVV
KEGGGDNNVTVVPFGTELLSGGSSVVLSQPYSSFKIYTNGTDWFALL*
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