mRNA_Ecto-sp13_S_contig89.20399.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig89.20399.1
Unique NamemRNA_Ecto-sp13_S_contig89.20399.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig89.20399.1 vs. uniprot
Match: A0A6H5JKD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKD5_9PHAE)

HSP 1 Score: 615 bits (1587), Expect = 7.060e-201
Identity = 325/347 (93.66%), Postives = 328/347 (94.52%), Query Frame = 1 
Query: 1615 MESTPEQVTEGRALVTVLACVLEKLIQANANSGHDHLEAGAVTKFHALRPPGIGVAEYLDRILKYSSCSNECFVLGLIYMDRFIQRNDFALTALNVHRVAITSVMVAAKFFDDQYYNNAYYAKVGGVPCVEMNSLEIEFLFGLDFNLAVTSEEYRNYRERLGEHSNCSVCGCSGAVVKSQQPPSALLQDGARDGRVMSSPSLVPAGYASGWQTSRGSFEDPAAMSNTSTPAAXXXXXXXXXX----HTNSPELVTPGAMRGNLLQPAAAGVVVPQQQQGVPGVGGLGMRGGGGGLLATGLEGHHSHCLGMGVVAGGGFQALHHQQHQQQPLFDGEGAGLERQLQLQQ 2643
            MESTPEQV+EGRALVTVLACVLEKLIQANANSGHDHLEAGAVTKFHALRPPGIGVAEYLDRILKYSSCSNECFVLGLIYMDRFIQRNDFALTALNVHRVAITSVMVAAKFFDDQYYNNAYYAKVGGVPC EMNSLEI FLFGLDFNLAVTSEEYRNYRERLGEHSNC  CGCSGAVVKSQQPPSALLQDGARDGRVMSSP LVPAGYASGWQTSRGSFEDPAAMSN STPAAXXXXXXXXXX    HTNSPELVTPGAMRGNLL PAAAG V PQQQQGVPG GGLGMRGGGGGLL+ GLEGHH+H LGMGVV GGGFQ LHH QHQQQPLFDGEGAGLERQLQLQQ
Sbjct:    1 MESTPEQVSEGRALVTVLACVLEKLIQANANSGHDHLEAGAVTKFHALRPPGIGVAEYLDRILKYSSCSNECFVLGLIYMDRFIQRNDFALTALNVHRVAITSVMVAAKFFDDQYYNNAYYAKVGGVPCAEMNSLEIVFLFGLDFNLAVTSEEYRNYRERLGEHSNCPACGCSGAVVKSQQPPSALLQDGARDGRVMSSPGLVPAGYASGWQTSRGSFEDPAAMSNKSTPAAXXXXXXXXXXXXXTHTNSPELVTPGAMRGNLLHPAAAGGVAPQQQQGVPGAGGLGMRGGGGGLLSAGLEGHHNHRLGMGVVTGGGFQGLHHHQHQQQPLFDGEGAGLERQLQLQQ 347
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BLAST of mRNA_Ecto-sp13_S_contig89.20399.1 vs. uniprot
Match: D8LIT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIT9_ECTSI)

HSP 1 Score: 394 bits (1011), Expect = 2.340e-128
Identity = 193/197 (97.97%), Postives = 196/197 (99.49%), Query Frame = 1 
Query: 1615 MESTPEQVTEGRALVTVLACVLEKLIQANANSGHDHLEAGAVTKFHALRPPGIGVAEYLDRILKYSSCSNECFVLGLIYMDRFIQRNDFALTALNVHRVAITSVMVAAKFFDDQYYNNAYYAKVGGVPCVEMNSLEIEFLFGLDFNLAVTSEEYRNYRERLGEHSNCSVCGCSGAVVKSQQPPSALLQDGARDGRVM 2205
            MESTPEQV+EGRALVTVLACVLEKLIQANANSGHDHLEAGAVTKFHALRPPGIGVAEYLDRILKYSSCSNECFVLGLIYMDRFIQRNDFALTALNVHRVAITSVMVAAKFFDDQYYNNAYYAKVGGVPCVEMNSLEIEFLFGLDFNLAVTSEEYRNYRERLGEHSNCSVCGCSGAVVKSQQPPS LLQDGARDGR++
Sbjct:    1 MESTPEQVSEGRALVTVLACVLEKLIQANANSGHDHLEAGAVTKFHALRPPGIGVAEYLDRILKYSSCSNECFVLGLIYMDRFIQRNDFALTALNVHRVAITSVMVAAKFFDDQYYNNAYYAKVGGVPCVEMNSLEIEFLFGLDFNLAVTSEEYRNYRERLGEHSNCSVCGCSGAVVKSQQPPSGLLQDGARDGRLV 197
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BLAST of mRNA_Ecto-sp13_S_contig89.20399.1 vs. uniprot
Match: A0A835YHA8_9STRA (Cyclin-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHA8_9STRA)

HSP 1 Score: 233 bits (593), Expect = 2.190e-66
Identity = 107/173 (61.85%), Postives = 134/173 (77.46%), Query Frame = 1 
Query: 1615 MESTPEQVTEGRALVTVLACVLEKLIQANANSGHDHLEAGAVTKFHALRPPGIGVAEYLDRILKYSSCSNECFVLGLIYMDRFIQRNDFALTALNVHRVAITSVMVAAKFFDDQYYNNAYYAKVGGVPCVEMNSLEIEFLFGLDFNLAVTSEEYRNYRERLGEHSNCSVCGCS 2133
            MEST  Q  EG+A V VLACVL KLI+AN  SGHDHL+   +TKFHAL PP I VA+YL+RI +Y+SCSNECFVL L+Y+DR I  N+FALT+ NVHRV ITSV++AAKFFDD YYNNAYY+++GG+P  E+N+LE EFLFG++F L VT  E+  YR +L  H+   +C C+
Sbjct:    1 MESTQAQAAEGKATVAVLACVLTKLIEANTASGHDHLDPACITKFHALMPPEISVADYLERIRRYASCSNECFVLSLVYIDRLILHNNFALTSYNVHRVVITSVLLAAKFFDDCYYNNAYYSRIGGIPVRELNTLEAEFLFGINFGLNVTPPEFYKYRSQLANHAASGLCKCA 173
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BLAST of mRNA_Ecto-sp13_S_contig89.20399.1 vs. uniprot
Match: A0A7S1GM66_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GM66_CYCTE)

HSP 1 Score: 214 bits (546), Expect = 2.510e-58
Identity = 104/177 (58.76%), Postives = 131/177 (74.01%), Query Frame = 1 
Query: 1615 MESTPEQVTEGRALVTVLACVLEKLIQANANSGHDHLEAGAVTKFHALRPPGIGVAEYLDRILKYSSCSNECFVLGLIYMDRFIQRNDFALTALNVHRVAITSVMVAAKFFDDQYYNNAYYAKVGGVPCVEMNSLEIEFLFGLDFNLAVTSEEYRNYRERLGEHSNCSVCGCSGAVV 2145
            ME+TPEQ  EG  +V VL+ VLE+L+ AN        + G VTKFHAL+ PGIG+ +YL+RI KY+SCSNECF+L LIY+DR IQRN+F LT LNVHRV IT++++AAKFFDD YYNNAYYAKVGGV   EMN LE++FLF ++F+L VT E +  YRE L  HS  ++  C   V+
Sbjct:    1 METTPEQAAEGIVVVRVLSAVLERLVSANTTISLS--DPGQVTKFHALKAPGIGILQYLERIHKYASCSNECFILALIYIDRLIQRNNFLLTELNVHRVVITAILLAAKFFDDAYYNNAYYAKVGGVLVSEMNGLEVDFLFRINFSLHVTPELFHKYREELVSHSGGAISHCHQEVI 175
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BLAST of mRNA_Ecto-sp13_S_contig89.20399.1 vs. uniprot
Match: A0A7R9VFU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VFU4_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.310e-57
Identity = 101/165 (61.21%), Postives = 126/165 (76.36%), Query Frame = 1 
Query: 1615 MESTPEQVTEGRALVTVLACVLEKLIQANANSGHDHLEAGAVTKFHALRPPGIGVAEYLDRILKYSSCSNECFVLGLIYMDRFIQRNDFALTALNVHRVAITSVMVAAKFFDDQYYNNAYYAKVGGVPCVEMNSLEIEFLFGLDFNLAVTSEEYRNYRERLGEHS 2109
            MESTPEQ  EG A+V VLA VL++L+ ANA       + G VTKFHAL+ PGIG+ +Y++RI KY+SCS ECF+L LIY+DR IQRN+F LT LNVHRV IT+V++AAKFFDD YYNNAYYAKVGGV   EMN LE+EFLF ++F+L V ++ +  YR  L  H+
Sbjct:    1 MESTPEQQAEGMAVVRVLAAVLDRLVGANAPLAQ--ADPGQVTKFHALKAPGIGILQYIERIHKYASCSTECFILALIYIDRLIQRNNFLLTELNVHRVVITAVLLAAKFFDDAYYNNAYYAKVGGVLVSEMNGLEVEFLFRINFSLHVQTDVFNKYRAELVAHA 163
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BLAST of mRNA_Ecto-sp13_S_contig89.20399.1 vs. uniprot
Match: A0A7S1VVV1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VVV1_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.350e-56
Identity = 107/182 (58.79%), Postives = 133/182 (73.08%), Query Frame = 1 
Query: 1615 MESTPEQVTEGRALVTVLACVLEKLIQANANSGHDHLEAGAVTKFHALRPPGIGVAEYLDRILKYSSCSNECFVLGLIYMDRFIQRNDFALTALNVHRVAITSVMVAAKFFDDQYYNNAYYAKVGGVPCVEMNSLEIEFLFGLDFNLAVTSEEYRNYRERLGEHSNCSVCGCSGAVVKSQQP 2160
            ME+TPEQ  EG  +V VLA VL++L+  NAN+     + G VTKFHAL+ PGIG+ +YL+RI KYSSCSNECFVL LIY+DR IQRN+F LT LNVHRV IT++++AAKFFDD YYNNAYYAKVGGV   EMN LE++FLF ++F+L VT E +  Y+E L   S     G + AV  +  P
Sbjct:    1 MEATPEQTAEGMVIVQVLAAVLDRLV--NANTSLALTDPGQVTKFHALKAPGIGIQQYLERIQKYSSCSNECFVLALIYIDRLIQRNNFLLTELNVHRVVITAILLAAKFFDDAYYNNAYYAKVGGVLVAEMNGLEVDFLFRINFSLHVTPELFHKYKEELMSQS---TNGATSAVAVTPIP 177
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BLAST of mRNA_Ecto-sp13_S_contig89.20399.1 vs. uniprot
Match: A0A6V0ZX60_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V0ZX60_9STRA)

HSP 1 Score: 209 bits (531), Expect = 7.620e-56
Identity = 103/166 (62.05%), Postives = 129/166 (77.71%), Query Frame = 1 
Query: 1615 MESTPEQVTEGRALVTVLACVLEKLIQANANSGHDHLEAGAVTKFHALRPPGIGVAEYLDRILKYSSCSNECFVLGLIYMDRFIQRNDFALTALNVHRVAITSVMVAAKFFDDQYYNNAYYAKVGGVPCVEMNSLEIEFLFGLDFNLAVTSEEYRNYRERLGEHSN 2112
            MESTP Q +EGRA+  VLA VLE+L++A++N   D  +   VTKFHALR P IG+ +YL+RI KY+SCS+ECFVL LIY+DR IQRN+F LT LNVHRV IT+V++AAKFFDD YYNNAYYAKVGGV   EMNSLE+EFLF ++F+L V  E ++ Y   L  H++
Sbjct:    1 MESTPHQESEGRAVCQVLAMVLERLVEASSNFEQDDSQ---VTKFHALRAPAIGICQYLERINKYASCSSECFVLALIYIDRLIQRNNFVLTELNVHRVVITAVLLAAKFFDDAYYNNAYYAKVGGVLVSEMNSLEVEFLFRINFSLRVVPEVFQKYHAELVSHAS 163
[Close]
BLAST of mRNA_Ecto-sp13_S_contig89.20399.1 vs. uniprot
Match: A0A5A8DGC0_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DGC0_CAFRO)

HSP 1 Score: 201 bits (512), Expect = 1.840e-55
Identity = 99/170 (58.24%), Postives = 122/170 (71.76%), Query Frame = 1 
Query: 1636 VTEGRALVTVLACVLEKLIQANANSGHDHLEAGAVTKFHALRPPGIGVAEYLDRILKYSSCSNECFVLGLIYMDRFIQRNDFALTALNVHRVAITSVMVAAKFFDDQYYNNAYYAKVGGVPCVEMNSLEIEFLFGLDFNLAVTSEEYRNYRERLGEHSNCSVCGCSGAVV 2145
            V +G+A V VLA VL +L+  N  SG     A  VT+FHALRPP I + +YL+RI KY+SCS ECF+L L+Y+DR IQ N+  LT+LNVHRV ITSVM+ AKFFDDQY+NNAYYAKVGGVPC EMNSLE+EFLF ++F+L V+ E Y  YR  L  H    + G   A +
Sbjct:    7 VEQGKAFVKVLAAVLTRLVANNDQSGA--AAAAEVTRFHALRPPNISIGDYLERIHKYASCSAECFILALVYIDRLIQGNNLTLTSLNVHRVIITSVMLGAKFFDDQYFNNAYYAKVGGVPCPEMNSLELEFLFSINFSLQVSGEVYNRYRGELATHLTAMMPGPDAAEL 174
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BLAST of mRNA_Ecto-sp13_S_contig89.20399.1 vs. uniprot
Match: A0A6T6F4E0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6F4E0_9STRA)

HSP 1 Score: 206 bits (525), Expect = 2.020e-55
Identity = 98/181 (54.14%), Postives = 135/181 (74.59%), Query Frame = 1 
Query: 1615 MESTPEQVTEGRALVTVLACVLEKLIQANANSGHDHLEAGAVTKFHALRPPGIGVAEYLDRILKYSSCSNECFVLGLIYMDRFIQRNDFALTALNVHRVAITSVMVAAKFFDDQYYNNAYYAKVGGVPCVEMNSLEIEFLFGLDFNLAVTSEEYRNYRERLGEHSNCSVCGCSGAVVKSQQ 2157
            ME+TP+Q  EG A+V +LA VL++L+  NA+  H   + G ++KFHAL+ PGIG+ +YL+RI +Y+SCSNECF+L LIY+DR IQRN+F LT LNVHRV IT++++AAKFFDD YYNNAYY+KVGGV   EMN LE++FLF ++F+L VT + ++ Y++ L  H       C  A ++ QQ
Sbjct:    1 MEATPQQAAEGLAIVKILAAVLDRLVCTNAS--HAQTDPGQISKFHALKAPGIGIQQYLERIHRYASCSNECFILALIYIDRLIQRNNFLLTELNVHRVVITAILLAAKFFDDAYYNNAYYSKVGGVLVSEMNGLEVDFLFRINFSLHVTPDVFKKYKDELLSH-------CVAAGIQPQQ 172
[Close]
BLAST of mRNA_Ecto-sp13_S_contig89.20399.1 vs. uniprot
Match: A0A7S1ZUY9_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZUY9_TRICV)

HSP 1 Score: 209 bits (531), Expect = 2.620e-55
Identity = 103/165 (62.42%), Postives = 126/165 (76.36%), Query Frame = 1 
Query: 1615 MESTPEQVTEGRALVTVLACVLEKLIQANANSGHDHLEAGAVTKFHALRPPGIGVAEYLDRILKYSSCSNECFVLGLIYMDRFIQRNDFALTALNVHRVAITSVMVAAKFFDDQYYNNAYYAKVGGVPCVEMNSLEIEFLFGLDFNLAVTSEEYRNYRERLGEHS 2109
            MESTPEQ  EG A+V VLA VLE+L+ ANA       + G VTKFHAL+ PGIG+ +YL+RI KY+SCS ECF+L LIY+DR IQRN+F LT LNVHRV IT+V++AAKFFDD YYNNAYYAKVGGV   EMN LE+EFLF ++F+L V ++ +  YR  L  H+
Sbjct:    1 MESTPEQQAEGMAVVRVLAAVLERLVSANAPLAQS--DPGQVTKFHALKAPGIGIQQYLERIHKYASCSTECFILALIYIDRLIQRNNFLLTELNVHRVVITAVLLAAKFFDDAYYNNAYYAKVGGVLVSEMNGLEVEFLFRINFSLHVQTDVFHKYRAELVAHA 163
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig89.20399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKD5_9PHAE7.060e-20193.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIT9_ECTSI2.340e-12897.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YHA8_9STRA2.190e-6661.85Cyclin-domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S1GM66_CYCTE2.510e-5858.76Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7R9VFU4_9STRA2.310e-5761.21Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S1VVV1_9STRA1.350e-5658.79Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A6V0ZX60_9STRA7.620e-5662.05Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A5A8DGC0_CAFRO1.840e-5558.24Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A6T6F4E0_9STRA2.020e-5554.14Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S1ZUY9_TRICV2.620e-5562.42Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig89contigEcto-sp13_S_contig89:5910..12749 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score396.7
Seed ortholog evalue1.2e-107
Seed eggNOG ortholog2880.D8LIT9
Model size2730
KEGG koko:K06657
KEGG Pathwayko04111,map04111
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.Cyclin-dependent protein kinase
EggNOG OGsKOG1674@1,KOG1674@2759
Ec32 ortholog descriptionCyclin-like
Ec32 orthologEc-20_001500.1
Cds size1116
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig89.20399.1prot_Ecto-sp13_S_contig89.20399.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig89 5910..9287 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464161.9128878-CDS-Ecto-sp13_S_contig89:5909..64411681464161.9128878-CDS-Ecto-sp13_S_contig89:5909..6441Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig89 5910..6441 -
1681464161.9289675-CDS-Ecto-sp13_S_contig89:7372..75871681464161.9289675-CDS-Ecto-sp13_S_contig89:7372..7587Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig89 7373..7587 -
1681464161.939829-CDS-Ecto-sp13_S_contig89:7961..81601681464161.939829-CDS-Ecto-sp13_S_contig89:7961..8160Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig89 7962..8160 -
1681464161.9515483-CDS-Ecto-sp13_S_contig89:8637..87081681464161.9515483-CDS-Ecto-sp13_S_contig89:8637..8708Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig89 8638..8708 -
1681464161.9660785-CDS-Ecto-sp13_S_contig89:9188..92871681464161.9660785-CDS-Ecto-sp13_S_contig89:9188..9287Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig89 9189..9287 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464161.9776928-UTR-Ecto-sp13_S_contig89:9287..99131681464161.9776928-UTR-Ecto-sp13_S_contig89:9287..9913Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig89 9288..9913 -
1681464161.9942057-UTR-Ecto-sp13_S_contig89:11346..119531681464161.9942057-UTR-Ecto-sp13_S_contig89:11346..11953Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig89 11347..11953 -
1681464162.0053923-UTR-Ecto-sp13_S_contig89:12368..127491681464162.0053923-UTR-Ecto-sp13_S_contig89:12368..12749Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig89 12369..12749 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig89.20399.1

>prot_Ecto-sp13_S_contig89.20399.1 ID=prot_Ecto-sp13_S_contig89.20399.1|Name=mRNA_Ecto-sp13_S_contig89.20399.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=372bp
MESTPEQVTEGRALVTVLACVLEKLIQANANSGHDHLEAGAVTKFHALRP
PGIGVAEYLDRILKYSSCSNECFVLGLIYMDRFIQRNDFALTALNVHRVA
ITSVMVAAKFFDDQYYNNAYYAKVGGVPCVEMNSLEIEFLFGLDFNLAVT
SEEYRNYRERLGEHSNCSVCGCSGAVVKSQQPPSALLQDGARDGRVMSSP
SLVPAGYASGWQTSRGSFEDPAAMSNTSTPAAAAAPAASSHTHTNSPELV
TPGAMRGNLLQPAAAGVVVPQQQQGVPGVGGLGMRGGGGGLLATGLEGHH
SHCLGMGVVAGGGFQALHHQQHQQQPLFDGEGAGLERQLQLQQHQQQQQL
QQQMQQDMQQQEQMQQMQQQQQ
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mRNA from alignment at Ecto-sp13_S_contig89:5910..12749-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig89.20399.1 ID=mRNA_Ecto-sp13_S_contig89.20399.1|Name=mRNA_Ecto-sp13_S_contig89.20399.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6840bp|location=Sequence derived from alignment at Ecto-sp13_S_contig89:5910..12749- (Ectocarpus species13 EcNAP12_S_4_19m)
GTACCACACCCGTTTTTTTTATGTGGAGGACGAGAGCTATACATCATCAT
CGCTGCCATCGTCCAGTAAAGCATTGTCTGGGAGAGGTGTCAAATCCCCA
TCGGTGGCGGTCTGTTCAAAGGAAGGGGGAGAGGGGGAAGTGACTGCGGC
AGCTTTTGTGTGCGGTCTTTTGTGTGTGCGTGCCTTTTGAGGAGAGAGAA
GCTCTTCAACAGCAGCAGCAGCACCGCAGGAGCATTTTCTTACGTTCGTT
TTTTCGTTTTTGGTTCCGGAGAGCGCAGGGCAGGGGCAACAGAAGCGCAC
ACCTTCTGGCCCTGAAGTGACGGAGCCGATTCTCTCCAGAAGCGCTGGAC
AGGGCGTCGTATGGTTGGCACGCGTTTGAGGGTGAGAGCCCATCATTTGG
CATGGAGAGTTCGTGGGTGTTGACGATCGCACATTTTTTCGGCCTTTGTC
TCTCTCGTTCTGTTGTTGCCTGGTCAGGCTGTGTAAGTTTGGATGGGGAC
AAAAACGAGAAGTGAACGGAAAAATCAGTGCGTCCTGTGCACAATCGCGC
TCCGAGCGTGCTGTCTCTGTCCCTTCCTGTGGCCTTGGGTAAGACCTGAT
GTGAGGGGACGTGATGTGAACGCTCGTAAGTGCGTTGCATCTTTTCGGTG
CACAGCCATCGTCGCTTTTTCGAAAAGCGTAGCAGTCTACATACACATCC
TCTCTGTGTCTTCAGTTTTTCTCCGTTTGTGTCAACGCCCTTCGCACGTA
TGCTGTACTGCGTCTTGTTGTCTACTACAAATGTGGCGAACAGCAGCGAG
GGGGTGCACTTTGTCAGGGATCGGGTGGGTATCAAAAGCCTGCATGATGC
CTGGGGGTGTGGGGGCACGGGGGGCGTGTATGGCCCGCGCCACCGCTATG
CGCCGCTAAGGTACCATCGGGGAGGGGCCTAAACTACGTCACAAAGACAG
TAGTAGTAGCATCCATTCGCGAAGGCGGGAGGGCAGCAGCAAGCAGCAGC
CGGCACTCTGTCTCTGTGTGCAGTTCAGGGCAAGACGGGCGCGTTCCGAG
GTGTATCGGTGGTCAAGGTTGATTTCAAGCACCAGCACGCGGGTGTGCAG
TGCTGCGGCGGTAAAAACGGAGGGAGGCAACCAATATACAGCCTTCGAGA
AGCAGCGTGGGATTCGATCTGCGAGTGACCGTTCCTGCATTACATCTCGT
CGCCGGCCGTAAGGGACGGAGTTGGGTGGAACCGGCACAGCGAAGGAGGG
TTCTGTGCGTTGGAGCGGAGCGGGGAGTTGCACTTCCACCGGATAACAAA
GCAAGGGTGGAGAACTACTGCCGGGCGGAGGAGTTGTGCGGAAGCGCCGG
AGTGTGAGACGTATCTTCCAGCAGAGGGACTAACTCGCCCACTCCGGGGC
AAGGTGGGTCTTCCGTTATACCTAGCATATGCATACGGTCGAGGTCGGGG
TTAATTTCGGTGCGTGCAGACCACGCGGGGACCTGGGTACTACTGTTTGT
AGGTGTGCGAATTTGTGATGATAGCCTTTGACCCGCCCCGCTCATGTTGT
TTAGTCTGGCACATTTATTACAGTCGTGGACGGAAGAGCTGCCCATTCTC
TCGGAGAGAGAGCGGTTGAAATATGCTGTGGAACAACCTGGTTGCCGTGA
AAGAGGGGGTGTCCATGCACGGGTGGGCTGTATAAGGCCGGTGTATAAGC
TCTTCGAGCATACAGGGAGGTTTCGCGTTTATGTGTGGCGTTAGCGTTTA
CCGTGAGGACCGGAGCTCCAGCTTCATACGTGCCAAGTTGGTGGCAAGGT
GAGGATCATCCCACCGCCGACGGTTTAAAGGAGAAAACCCGTGGCGGCGT
TTTCATAAAAGGCGGCCGCGTCAACCAACAAGAGCTTTGCCCTTTGATCC
ATTTAAATGATTTTAGTTTGTGGCGGATACTTCGTTCGTGTAGAATCCAA
GGAAGCAGCAATGGTATCTAGCCCGAGGACAACCCGTCTTCTTTGGTTTG
ACACAGCAGTCAACTCGACGGTTGACGAGGGAAACGATAATATGTCGAGA
GCTCTTCTCGCGACTTGAGTCCAACGACCTGCAGCGGCCCTTGACAGGAA
TGTTGTGTTATCTTCCGAAGCTTCTGTTTCTCGGTGGAGCAAAACAAGAC
CATGCGACAGACAGACAGACAGACTCCGCAAGCAGCAGCAGTATTTAAGC
AGTGGCGTAGACGTGGTGGAACGATTGCTTTAAGGGTAACGATATCCTCC
GTGGGACATTTTTTTTTCTTGTAGGCGAGTGTCTCGCCACCACCCTTTTG
CAGCCACAGGTGTTGCTTCCAGTGTCAAGCATTTCGTAGTTTTCGCAACC
TTGTAGTGAAATAGTCCCCGATCCCCTCTCGGCGACGAATCTCATGCGCG
CTTCATCGCCTCAGCAAAGCTTGTGTCTTCCAATAACTGCGGGGTTTGAA
GTGAGAACGGGTACGCGAACAGCAGGAGCAAGATCATGTGCCACCGTCCC
TGTCTCATGCACCACGCGCGAGCAGCTCAAGTCCTCCGCCGCACCCACTA
CCGAGATCAGTTCTTTCTTCCCATGTACTTCATCTGTGAGCCGAAAGTAT
AGAGCGCACTCAGCGTCGACCTTATCTCTTGCCGAATCGCGCGCGGTGTA
TCTCATACCACCATCCGCAGCATTCTTTCATGTGCCAGTGACAGTGCCTT
TTTTTATTGTTCAAGATAGCATCGCATGTCCCGCTGCTCCAGCACCTACA
CACCTACACCCTTACCATACCCTCCCCCCCCCCCGGTTCACGGTGGCCCC
TGCTGTGTTCCTCTGCGCTGTTGACGATTTGGGCAGGAGGCTCCCCTCAC
AAAGCCAAAGCAAAGAGAAGGAAAGGAAGGGTTTTGGAGATTGCGGAGAA
CGGTTGGCTGGGTAGTGAAAAGGGCGGGGCGCGCGTGCGGCAGCAGAGCC
CCTGGCGCACGCGGATAGGGTTGCGTGTTTTGGTTTGAAACGAGGGGGCC
GCCGTGTGGCGGTATTCCCGAACGGGTCTATTCTTGTTTGGTTATTTGTT
ATTCCCGGGGAGGGGGTTAGGTCTACCCTGATCGATTTTTCGGCCCTCTG
TTTATCGATATTTTAGTGTCCTTGGTTTTGATAACGAGTAGTCGACTCGT
TTCCGGGCTCTCTCGTTGGCTCGCTTCTTCAGATCGTGTTCTGATTGGCC
CCGCCAGTTGGACGGTTCCAGGGAGGGAGAGTAGAGCACAACTCTACCGT
ACAGGCTTGGGGCAGAGGTTTTCGCAATAGCACTGCGGTTGCTTATTTGT
CGATTCACGGTAATAACCAGCCATACCGTTTGCAAGAACGATCGCACTGG
ACGCTTGGTTGACACGGGAGATCTGGGAAGTGATTTGCGCGGTGTTTGGG
CAGGGGGAAGGCGGGAACGCCCCTTCTAGTCGTTGCGGGGGTTGTTCTAG
GCCTTGGACGCTATGGAGAGCACGCCCGAGCAGGTGACGGAGGGGAGGGC
GCTCGTTACGGTCCTTGCCTGCGTCCTCGAGAAGCTTATACAGGCCAACG
CAAACAGCGGGGTGAGCGAGCAAGGTGTCGTGTTCTGTCGTGTAGTTTTT
GCATGTGAGGATGTCTTCTTCCCCCCCCCCGAAGCAAAAGTTACACGATG
CATTTTACATTTCGAAGATATCTGGTGTACCACGGTTATTTTGGTCATCT
TCTCTTTTCGGTAGTGTTTACTTCTAAGCATGTTTTTTGACGTGAATTTC
GCGTATGGTCAGGAGAAGTTTCCCTTTTCGCTGTCCGCGTCTCTCGTCGT
ACCCTGAAGCGAACGACTTCTTGTTTTTTTTTGGGATGTGTTTGCGCGCA
CGAGTGCGTAGCAATCGGTGGGTCTTTGGCGTGGCCTACTCGTTGCCTCG
GTACGCAAGTGCGGTCTCTGCTGAACATCGGATGGTCTTTGTCTCTATCT
TTCTGTCTCTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCCCTCCCTCTCTCTCTCTCTCGTGACTGTTGTGCAGCATGACCAC
TTGGAGGCGGGTGCGGTCACCAAGTTTCACGCCCTGAGGCCTCCCGGTAT
CGGCGTCGCCGAGTGAGCTATTATAGCTTGTTAGCGATAGCTCGATCGAT
CCAAGATTTTGTTTCGATGTTTTGTGCTGTACGCCACACAAGGGAGCGCG
TGTGCGGCTGTTTAGTGAGGGGTGGTGTGGGCTGTTATGCTTGGCGGCAC
TATGCACATGCCAGCGTGGTTTCCGGAGCTGGCTGTAACCACAAGCGCGA
AAGATGCACGCAAAACATTCCCCCCCCAGCCGGTGAAGTCCCTTGCACGT
CGTGGTCCTTCATTCGATGTAGCTTTAGAGGCGAAAAGCGAAGACAAGCA
CAATGAAAACGCCGTGTTTGTTTCTCAGACTGCTGCAACGGAGTATCGGA
TAGGAGACTGTTGCAGGGTGTGCGGTTCTTCATACCCTGGTGGAGGTGGC
ACGCACACACTCACACAAAATCGCTCGACTGGTCCTTCTCTGTTTGTCTT
CGTCACCTGTGCCCCCCCCCCCGCCCTCCATCACCCTAGATATCTCGACC
GCATCCTCAAGTACTCGAGCTGCAGCAACGAGTGCTTCGTGCTGGGGCTA
ATTTACATGGACCGCTTCATCCAGCGAAACGACTTTGCGCTCACCGCGCT
CAATGTCCACCGCGTGGCCATCACGAGTGTGATGGTCGCCGCCAAGTTTT
TCGACGACCAGTATTACAACAACGCCTACTACGCCAAGGTGCGCGTCATG
CCGTCTTCGACGCACAGCTGCAGTATTCGTGCTTGTGAAGGCGTCAAGAT
GCAAAGGCAGCAGAATATCGCAAGCACGGTCACAACCTGACATCGTCCCT
ACGCCAATTTACTGTCGTGGCATGATATCCCCCGCCGGGGGGCTGGCTCC
CTGATGGCATGCCTCCACGTAAACAACCGTAGTCTTGTTGCTGAAGTGAC
GGCGTCGAAAATTACCTCCCCCGCCGATACTATCGGTGTACGGCAGGCGT
ACTGTTGGTGTGTTCATGAGCTCCCTGCACACCGCTTTCACAGTCCATAC
CCCCCCCCTCCGCGCGCCATCATACCCGCCCCCCCCCCCCCCCCTCCCCC
GCCCAATTTTAGGTGGGAGGTGTCCCGTGCGTGGAGATGAACTCTCTAGA
GATCGAGTTCCTGTTCGGCTTGGACTTCAACCTGGCTGTCACGTCGGAGG
AGTACCGCAACTACCGGGAGAGGCTCGGGGAGCACTCCAACTGCTCCGTG
TGCGGCTGCTCTGGGGCCGTTGTGAAGAGCCAGCAGCCCCCGTCGGCGCT
GCTGCAGGACGGCGCGCGTGACGGTCGGTGAGGCTCGTGCGTTGTGTTGT
GTGTGTGTATTTATTGTTTGCATCGACTACGCCAACCGGCTGACCGATAA
CATGTGTGTGTTTTTTTTAAATGGCATCGACCGCGCCAGCTTACTGCTGG
CCAAAGAAAAGACGCCAGTCTTCCAGCGGGACAATGCACGCAAACGCGCG
TTGTAATCGAAGGGTTATTCGGACATGAGGGGCGCAATAGTTGCGGTGTG
TTTTTTGTTTTTGTTGGGACCGCGCTAACCGGCTGATCCATGTACAGATT
CAGCGCTAGCGGCTAAAATAGTAGTGCCCTAATGGGGGGTCGGTTTTTTC
GCCATGTGTGCATGAAATGTGTGCTTGTGTGCGTCGACCGCGCCAACCTA
CGGCCAGAAATAAAAGACAGTCTTGTGTATTGTGGGACACAAGAATAGGC
AAACAGGCGTTGCAGTAGTCAAGACTCGCCTTGCGAGTGGGTTGGCCACG
GAGTAGGTTCGACTACGGGGTCGTGTGCACGTGTTTTATTTTCTTCCCAT
GGTAGTTTCAAGGAAGCGTGATTGCGCGGGTTGGTTCTTGTCTCTGCTGT
CGGGGTATACGTCCCCGGCTCAAGGTCCATCGTTTGCTGCTACTGATCGG
GATTAATGTTGGTTGGACCTATTTTTTGTCGCCGAAGTCCATCGTTCATC
GTTACCGGCTGTCCCGCGAGCATAGTTGCGAGTTGTGGAGAAATAACCCC
GCACCAAAACCTTGCTTCGTACTCGCACGAGCGTTGAGATGGCGCGCAAG
AAGTGCTCTCATCGTGCACCTGCACGCGCCCAACCATCCGGCCGTGACAC
TGCAGGTCCATTCCAGCTCTCTTCCTTGTTATTGCCGCGAACAACATGTG
TTGAATTTTCTCACGCACACCCCTTCCCGACAACCGAAACAATGATGTAC
TATTACAGGGTTATGTCATCACCAAGCCTCGTACCCGCCGGATACGCTTC
CGGGTGGCAAACGTCTCGCGGCAGCTTCGAAGACCCCGCGGCAATGTCGA
ACACGTCCACGCCAGCGGCAGCGGCGGCGCCGGCGGCGAGCAGCCACACC
CACACGAACAGTCCGGAGTTGGTGACCCCAGGGGCCATGCGGGGAAACCT
CTTACAACCAGCGGCGGCGGGGGTGGTGGTCCCCCAGCAGCAGCAAGGGG
TTCCAGGGGTTGGAGGTCTCGGGATGCGGGGGGGGGGCGGGGGGTTGTTG
GCGACGGGGCTTGAGGGTCATCACAGTCACTGCCTAGGGATGGGGGTTGT
GGCTGGAGGAGGGTTCCAAGCCCTCCACCATCAGCAGCACCAGCAGCAAC
CGCTTTTTGACGGGGAAGGGGCGGGCTTGGAACGACAACTGCAACTCCAG
CAGCATCAACAGCAGCAGCAGCTGCAGCAGCAGATGCAGCAAGACATGCA
GCAGCAGGAGCAAATGCAGCAGATGCAGCAGCAGCAACAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig89:5910..12749-

>mRNA_Ecto-sp13_S_contig89.20399.1 ID=mRNA_Ecto-sp13_S_contig89.20399.1|Name=mRNA_Ecto-sp13_S_contig89.20399.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1116bp|location=Sequence derived from alignment at Ecto-sp13_S_contig89:5910..12749- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGAGCACGCCCGAGCAGGTGACGGAGGGGAGGGCGCTCGTTACGGT
CCTTGCCTGCGTCCTCGAGAAGCTTATACAGGCCAACGCAAACAGCGGGC
ATGACCACTTGGAGGCGGGTGCGGTCACCAAGTTTCACGCCCTGAGGCCT
CCCGGTATCGGCGTCGCCGAATATCTCGACCGCATCCTCAAGTACTCGAG
CTGCAGCAACGAGTGCTTCGTGCTGGGGCTAATTTACATGGACCGCTTCA
TCCAGCGAAACGACTTTGCGCTCACCGCGCTCAATGTCCACCGCGTGGCC
ATCACGAGTGTGATGGTCGCCGCCAAGTTTTTCGACGACCAGTATTACAA
CAACGCCTACTACGCCAAGGTGGGAGGTGTCCCGTGCGTGGAGATGAACT
CTCTAGAGATCGAGTTCCTGTTCGGCTTGGACTTCAACCTGGCTGTCACG
TCGGAGGAGTACCGCAACTACCGGGAGAGGCTCGGGGAGCACTCCAACTG
CTCCGTGTGCGGCTGCTCTGGGGCCGTTGTGAAGAGCCAGCAGCCCCCGT
CGGCGCTGCTGCAGGACGGCGCGCGTGACGGTCGGGTTATGTCATCACCA
AGCCTCGTACCCGCCGGATACGCTTCCGGGTGGCAAACGTCTCGCGGCAG
CTTCGAAGACCCCGCGGCAATGTCGAACACGTCCACGCCAGCGGCAGCGG
CGGCGCCGGCGGCGAGCAGCCACACCCACACGAACAGTCCGGAGTTGGTG
ACCCCAGGGGCCATGCGGGGAAACCTCTTACAACCAGCGGCGGCGGGGGT
GGTGGTCCCCCAGCAGCAGCAAGGGGTTCCAGGGGTTGGAGGTCTCGGGA
TGCGGGGGGGGGGCGGGGGGTTGTTGGCGACGGGGCTTGAGGGTCATCAC
AGTCACTGCCTAGGGATGGGGGTTGTGGCTGGAGGAGGGTTCCAAGCCCT
CCACCATCAGCAGCACCAGCAGCAACCGCTTTTTGACGGGGAAGGGGCGG
GCTTGGAACGACAACTGCAACTCCAGCAGCATCAACAGCAGCAGCAGCTG
CAGCAGCAGATGCAGCAAGACATGCAGCAGCAGGAGCAAATGCAGCAGAT
GCAGCAGCAGCAACAG
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