mRNA_Ecto-sp13_S_contig8832.20319.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8832.20319.1 vs. uniprot
Match: D7FR63_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR63_ECTSI) HSP 1 Score: 427 bits (1098), Expect = 2.630e-150 Identity = 215/219 (98.17%), Postives = 216/219 (98.63%), Query Frame = 1
Query: 1 SNKLVLLAGAIAGASIEWWWSARSAKKGNKLLEQESEAFVAEWNKERDALMARRTYPIKLLAHEVEEADVQLMQLVAAAEDAGVDLGAGGGGLGLGATRPKARSIQQDNMEYEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEWQMYLDRHQQQDPYAENDLMRGMYDSSAGSQNFNTLAQNLRTQGRAGGGRY 657
SNKLVLLAGAIAGASIEWWWSARSAKKGNKLLEQES AF+AEWNKERDALMARRTYPIKLLAHEVEEADVQLMQLVAAAEDAGVDLGAGG GLG GATRPKARSIQQDNMEYEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEWQMYLDRHQQQDPYAENDLMRGMYDSSAGSQNFNTLAQNLRTQGRAGGGRY
Sbjct: 53 SNKLVLLAGAIAGASIEWWWSARSAKKGNKLLEQESAAFIAEWNKERDALMARRTYPIKLLAHEVEEADVQLMQLVAAAEDAGVDLGAGGSGLGGGATRPKARSIQQDNMEYEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEWQMYLDRHQQQDPYAENDLMRGMYDSSAGSQNFNTLAQNLRTQGRAGGGRY 271
BLAST of mRNA_Ecto-sp13_S_contig8832.20319.1 vs. uniprot
Match: A0A835YQF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF0_9STRA) HSP 1 Score: 103 bits (256), Expect = 2.090e-23 Identity = 63/177 (35.59%), Postives = 97/177 (54.80%), Query Frame = 1
Query: 10 LVLLAGAIAGASIEWWWSARSAKKGNKLLEQESEAFVAEWNKERDALMARRTYPIKLLAHEVEEADVQLMQLVAAAEDAGVDLGAGGGGLGLGATRPKARSIQQDNMEYEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEWQMYLDRHQQQD 540
L L G + G ++ + R+AKK K + + +A A+ + RD + +R + L +V++A++++ +L AA DAG+DLG Q ++Y EFKQPD + D+ I++ EF YI +YL YP D+P FEDFD DG+V F EWQ YLDR +++D
Sbjct: 49 LPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGE-----------------TQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQRKED 208
BLAST of mRNA_Ecto-sp13_S_contig8832.20319.1 vs. uniprot
Match: A0A836CPR7_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR7_9STRA) HSP 1 Score: 103 bits (256), Expect = 2.770e-23 Identity = 62/179 (34.64%), Postives = 97/179 (54.19%), Query Frame = 1
Query: 4 NKLVLLAGAIAGASIEWWWSARSAKKGNKLLEQESEAFVAEWNKERDALMARRTYPIKLLAHEVEEADVQLMQLVAAAEDAGVDLGAGGGGLGLGATRPKARSIQQDNMEYEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEWQMYLDRHQQQD 540
+ L L+ G + G ++ + ++ +K E + +A K R+A + ++ + L VE+A++++ +L AA DAG+D+ S Q ++YEEFKQPD + DN IS+ EF YI YL YP D+P FEDFD + DG V+F EWQMYL+R +++D
Sbjct: 59 SMLPLVGGLVGGWLLDMQLTRKADRKRKLSHEHDKKALAQRLQKHRNAEVNKKLVNLANLEALVEDAELRIEELQQAAVDAGMDI-----------------SATQAEVDYEEFKQPDANHDNRISRAEFNAYIADYLRQYPHLRREDMPKFEDFDSSRDGSVNFKEWQMYLERQRKED 220
BLAST of mRNA_Ecto-sp13_S_contig8832.20319.1 vs. uniprot
Match: A0A7S2SJ01_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJ01_9STRA) HSP 1 Score: 102 bits (254), Expect = 5.790e-23 Identity = 55/115 (47.83%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 310 SIQQDNMEYEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEWQMYLDRHQ---QQDPYA------ENDLMRGMYDSSAGSQNFNTLAQNLR 627
S+Q+D YEEFKQPD +GD+VIS+ EF QYIR Y+ YP A + P FEDFD+N DG+V+F EWQ YL + Q QQ A + + +YD +AG+QNF L + L+
Sbjct: 127 SLQRD---YEEFKQPDANGDDVISRAEFSQYIRNYMKAYPHIAPEEYPTFEDFDVNRDGLVTFQEWQEYLYQQQLAEQQQQQATGSRGRQQSAVNNLYDQTAGAQNFQNLYEQLQ 238
BLAST of mRNA_Ecto-sp13_S_contig8832.20319.1 vs. uniprot
Match: A0A482SNT9_9ARCH (EF-hand domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNT9_9ARCH) HSP 1 Score: 93.2 bits (230), Expect = 3.660e-20 Identity = 46/114 (40.35%), Postives = 72/114 (63.16%), Query Frame = 1
Query: 331 EYEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEWQMYLDRHQQQDPY----------AENDLMRGMYDSSAGSQNFNTLAQNLRTQGRA 642
+YEEFK PDT+ D++IS+ EF Y+ KYLS +P+ +E D P F+DFD + DG+VSFDEWQ +L + + Q+ A +L+ +Y+ S + ++++L +N GRA
Sbjct: 59 DYEEFKAPDTNNDDMISRAEFNAYVTKYLSSFPELSEADFPKFDDFDQDEDGLVSFDEWQKFLVQQKLQEAQMKKNDKNNNSAYQELLSSLYEQSNQADSWDSLTKNTPKNGRA 172
BLAST of mRNA_Ecto-sp13_S_contig8832.20319.1 vs. uniprot
Match: A0A6U3WRH6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3WRH6_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 2.780e-15 Identity = 47/115 (40.87%), Postives = 64/115 (55.65%), Query Frame = 1
Query: 331 EYEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEW---------QMYLDRHQQQDPYAEN-------DLMRGMYDSSAGSQNFNTLAQNLR 627
EY+EFKQPD DGD+ IS+TEF+ Y++ YLS YP E D P FE+FD + DG VSF E+ + LD++ Q A + + +Y S+A S FN L +R
Sbjct: 98 EYDEFKQPDIDGDDRISRTEFHMYVKNYLSNYPGLTEKDYPKFEEFDHDKDGYVSFQEYAQQMAVQAQEAELDQYYAQSQGASGKKEAQKANALYDLYGSAADSGGFNDLYAQIR 212
BLAST of mRNA_Ecto-sp13_S_contig8832.20319.1 vs. uniprot
Match: A0A7S2LGL3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGL3_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 4.240e-14 Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 310 SIQQDNMEYEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEW 507
++Q+D Y+EFKQPD DGD+ IS+ EF Y++ YLS YP E D+P FEDFD +NDG VSF E+
Sbjct: 142 ALQRD---YDEFKQPDVDGDDRISRAEFNHYVKNYLSNYPGLTEKDMPKFEDFDHDNDGSVSFSEY 204
BLAST of mRNA_Ecto-sp13_S_contig8832.20319.1 vs. uniprot
Match: B8BTK8_THAPS (EF-hand domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTK8_THAPS) HSP 1 Score: 79.3 bits (194), Expect = 4.910e-14 Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 331 EYEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEWQMYL 519
EY+EFKQPD DGD+ IS+TEF Y++ YLS YP E D P FEDFD ++DG VSF E+ +
Sbjct: 175 EYDEFKQPDVDGDDRISRTEFNMYVKNYLSNYPGLTEKDYPKFEDFDHDHDGYVSFQEYAQQM 237
BLAST of mRNA_Ecto-sp13_S_contig8832.20319.1 vs. uniprot
Match: A0A7S2VWM5_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWM5_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 6.860e-14 Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 310 SIQQDNME--YEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEWQMYL 519
S + D M+ Y+EFKQPD DGD+ IS+ EF Y++ YLS YP AE D P FEDFD ++DG VSF E+ +
Sbjct: 123 SAELDAMQRDYDEFKQPDIDGDDRISRAEFNMYVKNYLSNYPGLAEKDYPRFEDFDHDHDGYVSFSEYSQQM 194
BLAST of mRNA_Ecto-sp13_S_contig8832.20319.1 vs. uniprot
Match: A0A7S3Q1R5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1R5_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 8.620e-13 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 307 RSIQQDNMEYEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEWQMYL 519
R ++ +Y+EFKQPD DGD+ IS+ EF Y++ YL+ YP E D P FE+FD ++DG VSF E+ +
Sbjct: 137 REMEVMQRDYDEFKQPDVDGDDRISRAEFQMYVKNYLANYPGLTEKDYPRFEEFDHDHDGYVSFTEYSQQM 207 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8832.20319.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8832.20319.1 >prot_Ecto-sp13_S_contig8832.20319.1 ID=prot_Ecto-sp13_S_contig8832.20319.1|Name=mRNA_Ecto-sp13_S_contig8832.20319.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=220bp SNKLVLLAGAIAGASIEWWWSARSAKKGNKLLEQESEAFVAEWNKERDALback to top mRNA from alignment at Ecto-sp13_S_contig8832:865..4587+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8832.20319.1 ID=mRNA_Ecto-sp13_S_contig8832.20319.1|Name=mRNA_Ecto-sp13_S_contig8832.20319.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3723bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8832:865..4587+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8832:865..4587+ >mRNA_Ecto-sp13_S_contig8832.20319.1 ID=mRNA_Ecto-sp13_S_contig8832.20319.1|Name=mRNA_Ecto-sp13_S_contig8832.20319.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=660bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8832:865..4587+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |