prot_Ecto-sp13_S_contig8826.20313.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8826.20313.1
Unique Nameprot_Ecto-sp13_S_contig8826.20313.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length285
Homology
BLAST of mRNA_Ecto-sp13_S_contig8826.20313.1 vs. uniprot
Match: D7FU40_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU40_ECTSI)

HSP 1 Score: 406 bits (1043), Expect = 6.880e-136
Identity = 209/223 (93.72%), Postives = 214/223 (95.96%), Query Frame = 0
Query:   62 TGDTAVPGGAQATSSRGGTDSSENAHDVDSDLSAGASHPPAAGGSRKAEVAAEGAVLEEEATFESLGLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGKYVLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGRLRDHLQGPAAPALAKCRYLVLDEADRLLAPTFQG 284
            TGD+ VPGG+QAT+SRGG  S EN HDVD +LSAGASHP AA GSRKAEVAAEGAVLEEEATFESLGLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGK VLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGRLRDHLQGPAAPALAKCRYLVLDEADRLLAPTF+G
Sbjct:   50 TGDSDVPGGSQATTSRGGKGSRENGHDVDPNLSAGASHPSAADGSRKAEVAAEGAVLEEEATFESLGLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGKDVLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGRLRDHLQGPAAPALAKCRYLVLDEADRLLAPTFEG 272          
BLAST of mRNA_Ecto-sp13_S_contig8826.20313.1 vs. uniprot
Match: A0A836CIA6_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIA6_9STRA)

HSP 1 Score: 266 bits (681), Expect = 3.400e-83
Identity = 130/185 (70.27%), Postives = 155/185 (83.78%), Query Frame = 0
Query:  100 PPAAGGSRKAEVAAEGAVLEEEATFESLGLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGKYVLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGRLRDHLQGPAAPALAKCRYLVLDEADRLLAPTFQG 284
            P +A G R+A +  + + ++ + TF+SLGLCDWL  AC AMGFRRPTPVQ+HCIPAVL+GK VLGCAETGSGKTAAFALPILH LSKDPYG++AVVLTPTRELAVQI+EQF ALGA MGLRH VVIGG+ ++ Q + L+ RPHV++ATPGRLRDHLQG + P L+K +YLVLDEADRLL+  FQ 
Sbjct:   30 PASATGIREAAIVGDTSGVDTDTTFDSLGLCDWLQRACGAMGFRRPTPVQQHCIPAVLDGKDVLGCAETGSGKTAAFALPILHTLSKDPYGIYAVVLTPTRELAVQIAEQFEALGAPMGLRHAVVIGGMNMMAQGVELAKRPHVIIATPGRLRDHLQGASPPDLSKLKYLVLDEADRLLSMGFQS 214          
BLAST of mRNA_Ecto-sp13_S_contig8826.20313.1 vs. uniprot
Match: W7UCM8_9STRA (Atp-dependent rna helicase ddx49-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UCM8_9STRA)

HSP 1 Score: 226 bits (575), Expect = 7.740e-67
Identity = 107/157 (68.15%), Postives = 130/157 (82.80%), Query Frame = 0
Query:  127 LGLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGKYVLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGRLRDHLQGPAAPALAKCRYLVLDEADRLLAPTFQ 283
            LGL  W+  AC AMGF+RPTPVQ  CIP++L+G+ V+GCAETGSGKTAAFALP+LH LS+DPYGVF +VLTPTRELA+QI+EQF ALGA +GLRH VVIGG  +++Q++ L+ RPHVVVATPGRL DHL+G A P L+K  +LVLDEADRL    F+
Sbjct:   69 LGLAPWIQGACNAMGFKRPTPVQEQCIPSILQGRDVMGCAETGSGKTAAFALPMLHRLSEDPYGVFGLVLTPTRELAIQIAEQFQALGAPLGLRHCVVIGGESMVQQAVELARRPHVVVATPGRLWDHLRGAAPPDLSKATFLVLDEADRLFCDGFE 225          
BLAST of mRNA_Ecto-sp13_S_contig8826.20313.1 vs. uniprot
Match: A0A484DY74_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DY74_BRELC)

HSP 1 Score: 212 bits (540), Expect = 9.090e-65
Identity = 101/160 (63.12%), Postives = 126/160 (78.75%), Query Frame = 0
Query:  123 TFESLGLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGKYVLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGRLRDHLQGPAAPALAKCRYLVLDEADRLLAPTF 282
            +F +LG+  WL+  C+ MG R+PTPVQ HCIP +L G+ V+GCA+TGSGKTAAFALPILH LSKDPYG +A+VLTPTRELA QISEQF A G+ M +R  V++GGV +L+QSL L  RPH++VATPGRLRDHL     P ++  +Y+VLDEADRLL  +F
Sbjct:   51 SFLNLGVDPWLVKRCELMGIRQPTPVQSHCIPPILSGRDVIGCAQTGSGKTAAFALPILHTLSKDPYGPYALVLTPTRELAFQISEQFNAFGSSMAIRCAVIVGGVDMLKQSLTLQQRPHIIVATPGRLRDHLLRVEPPNISLIKYVVLDEADRLLDISF 210          
BLAST of mRNA_Ecto-sp13_S_contig8826.20313.1 vs. uniprot
Match: K3X673_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X673_GLOUD)

HSP 1 Score: 216 bits (550), Expect = 3.100e-63
Identity = 113/192 (58.85%), Postives = 144/192 (75.00%), Query Frame = 0
Query:  100 PPAAG--GSRKAEVAAEGAVLE-EEAT------FESLGLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGKYVLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGRLRDHLQGPAAPALAKCRYLVLDEADRLLAPTF 282
            PPAA    S+ A VAA+  +++ E+AT      F +LGL  WL+  C+ +G R PTPVQ +CIP +L+G+ VLGCA+TGSGKTAAFALPILH LSKDPYG FAVVLTPTRELA QI++QF A G+ MG+R  V++GGV +L+Q+L L  RPH+++ATPGRL DHL  P  P LA  +++VLDEADRLL  +F
Sbjct:   24 PPAAATSSSKIAAVAADKVIVDGEDATSTMLISFLNLGLDPWLVKKCELVGIRHPTPVQANCIPPILDGRDVLGCAQTGSGKTAAFALPILHALSKDPYGPFAVVLTPTRELAYQIADQFNAFGSSMGVRCAVIVGGVDMLKQALELQNRPHIIIATPGRLHDHLLRPNPPNLALVKFVVLDEADRLLDVSF 215          
BLAST of mRNA_Ecto-sp13_S_contig8826.20313.1 vs. uniprot
Match: A0A8C1XD47_CYPCA (RNA helicase n=4 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1XD47_CYPCA)

HSP 1 Score: 214 bits (545), Expect = 5.890e-63
Identity = 100/157 (63.69%), Postives = 126/157 (80.25%), Query Frame = 0
Query:  122 ATFESLGLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGKYVLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGRLRDHLQGPAAPALAKCRYLVLDEADRLL 278
            ATFESLGLC+WL+  CK MG  RPTPVQ  CIPA+LEG+  +GCA+TGSGKTAAF LP+L +LS+DPYGVF +VLTPTRELA QI+EQF ALG  MGL+  +++GG+ ++ Q L LS +PHVVVATPGRL DH++     +L + ++L+LDEADRLL
Sbjct:    2 ATFESLGLCEWLIQQCKQMGISRPTPVQEKCIPAILEGRDCMGCAKTGSGKTAAFVLPVLQKLSEDPYGVFCLVLTPTRELAYQIAEQFRALGKPMGLKDCIIVGGMDMVTQGLELSKKPHVVVATPGRLADHIRSSDTISLNRIQFLILDEADRLL 158          
BLAST of mRNA_Ecto-sp13_S_contig8826.20313.1 vs. uniprot
Match: A0A812UIM1_SYMMI (DDX49 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UIM1_SYMMI)

HSP 1 Score: 204 bits (518), Expect = 5.950e-63
Identity = 91/144 (63.19%), Postives = 122/144 (84.72%), Query Frame = 0
Query:  128 GLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGKYVLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGRLRDHLQGPAAPALAKCRYLVL 271
            GL  W+ ++CKAMGF++PTP+Q+ CIPA+LEG+ V+GCAETGSGKTAAFALP+L +LS+DPYG+F ++LTPTRELAVQI EQ  ALG+ +G+R  ++IGG+GI++Q +ALS  PH+V+ATPGRLR HL+  + P +A+ RYLVL
Sbjct:    1 GLNQWVCSSCKAMGFKQPTPIQQACIPAILEGRNVMGCAETGSGKTAAFALPMLQDLSEDPYGIFGIILTPTRELAVQIEEQIVALGSPVGVRTCLIIGGLGIIDQGVALSRMPHIVIATPGRLRHHLESASPPQIARTRYLVL 144          
BLAST of mRNA_Ecto-sp13_S_contig8826.20313.1 vs. uniprot
Match: A0A5A9NE61_9TELE (RNA helicase n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9NE61_9TELE)

HSP 1 Score: 213 bits (543), Expect = 1.030e-62
Identity = 100/157 (63.69%), Postives = 124/157 (78.98%), Query Frame = 0
Query:  122 ATFESLGLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGKYVLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGRLRDHLQGPAAPALAKCRYLVLDEADRLL 278
            ATFES+GLCDWL+  CK MG  RPTPVQ  CIPA+LEG+  +GCA+TGSGKTAAF LP+L +LS DPYGVF +VLTPTRELA QI+EQF ALG  +GL+  +++GG+ ++ Q L LS +PHVVVATPGRL DH++      L K ++L+LDEADRLL
Sbjct:    2 ATFESVGLCDWLIQQCKEMGINRPTPVQEKCIPAILEGRDCMGCAKTGSGKTAAFVLPVLQKLSDDPYGVFCLVLTPTRELAYQIAEQFRALGKPLGLKDCIIVGGMDMVTQGLELSRKPHVVVATPGRLADHIRSSDTINLKKIQFLILDEADRLL 158          
BLAST of mRNA_Ecto-sp13_S_contig8826.20313.1 vs. uniprot
Match: A0A8K1C5K1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5K1_PYTOL)

HSP 1 Score: 212 bits (540), Expect = 1.160e-61
Identity = 101/160 (63.12%), Postives = 127/160 (79.38%), Query Frame = 0
Query:  123 TFESLGLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGKYVLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGRLRDHLQGPAAPALAKCRYLVLDEADRLLAPTF 282
            +F +LGL  W++  C+ +G R PTPVQ +CIP +L+G+ VLGCA+TGSGKTAAFALPILH+LSKDPYG FAVVLTPTRELA QI++QF   G+ MG+R  V++GGV +L+Q+L L  RPHV++ATPGRL DHL  P  P LA  ++LVLDEADRLL  +F
Sbjct:   63 SFLNLGLDPWIVKKCELVGIRHPTPVQANCIPPILQGRDVLGCAQTGSGKTAAFALPILHKLSKDPYGPFAVVLTPTRELAFQIADQFNVFGSSMGVRCAVIVGGVDMLKQALELQERPHVIIATPGRLHDHLLRPNPPNLALIKFLVLDEADRLLDVSF 222          
BLAST of mRNA_Ecto-sp13_S_contig8826.20313.1 vs. uniprot
Match: A0A1X7UUQ6_AMPQE (RNA helicase n=3 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UUQ6_AMPQE)

HSP 1 Score: 209 bits (533), Expect = 1.860e-61
Identity = 98/166 (59.04%), Postives = 128/166 (77.11%), Query Frame = 0
Query:  118 LEEEATFESLGLCDWLLTACKAMGFRRPTPVQRHCIPAVLEGKYVLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTRELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGRLRDHLQGPAAPALAKCRYLVLDEADRLLAPTFQ 283
            + +  TF SLGL  WL+  C+ +GF+  TPVQ++CIP ++EG+  +G A+TGSGKTAAFALPILH LS+DPYG++A+VLTPTRELA QIS+QF  LG  +G++  V++GGV ++ Q+LALS RPH+VVATPGRL DHLQ      + K +YLVLDEADRLL   F+
Sbjct:    1 MADSCTFSSLGLSSWLVRQCEGLGFKEATPVQKNCIPPIMEGRDCIGSAKTGSGKTAAFALPILHSLSRDPYGIYALVLTPTRELAYQISDQFCVLGKHIGVKSEVIVGGVDMMVQALALSRRPHIVVATPGRLADHLQSTDTVFMEKIKYLVLDEADRLLEKCFE 166          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8826.20313.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU40_ECTSI6.880e-13693.72DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A836CIA6_9STRA3.400e-8370.27DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
W7UCM8_9STRA7.740e-6768.15Atp-dependent rna helicase ddx49-like protein n=2 ... [more]
A0A484DY74_BRELC9.090e-6563.13Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
K3X673_GLOUD3.100e-6358.85Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8C1XD47_CYPCA5.890e-6363.69RNA helicase n=4 Tax=Cyprinus carpio TaxID=7962 Re... [more]
A0A812UIM1_SYMMI5.950e-6363.19DDX49 protein (Fragment) n=1 Tax=Symbiodinium micr... [more]
A0A5A9NE61_9TELE1.030e-6263.69RNA helicase n=1 Tax=Triplophysa tibetana TaxID=15... [more]
A0A8K1C5K1_PYTOL1.160e-6163.13Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1X7UUQ6_AMPQE1.860e-6159.04RNA helicase n=3 Tax=Amphimedon queenslandica TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 141..284
e-value: 9.9E-24
score: 94.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 153..284
score: 24.096
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 146..282
e-value: 9.3E-36
score: 123.2
NoneNo IPR availableGENE3D3.40.50.300coord: 111..284
e-value: 6.0E-62
score: 210.6
NoneNo IPR availablePANTHERPTHR24031:SF676ATP-DEPENDENT RNA HELICASE DDX49-RELATEDcoord: 96..283
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 96..283
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 270..278
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 122..150
score: 12.024
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 116..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8826contigEcto-sp13_S_contig8826:946..4168 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8826.20313.1mRNA_Ecto-sp13_S_contig8826.20313.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8826 946..4978 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8826.20313.1 ID=prot_Ecto-sp13_S_contig8826.20313.1|Name=mRNA_Ecto-sp13_S_contig8826.20313.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=285bp
MYVTAVSTTGHVVPSFVIVLHRYVFRCNGKSKSASCGDDRHPWSLALHCR
SSPLSQRRTYRTGDTAVPGGAQATSSRGGTDSSENAHDVDSDLSAGASHP
PAAGGSRKAEVAAEGAVLEEEATFESLGLCDWLLTACKAMGFRRPTPVQR
HCIPAVLEGKYVLGCAETGSGKTAAFALPILHELSKDPYGVFAVVLTPTR
ELAVQISEQFGALGALMGLRHTVVIGGVGILEQSLALSGRPHVVVATPGR
LRDHLQGPAAPALAKCRYLVLDEADRLLAPTFQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase